RNA–Protein interactions for RNA: ENST00000612899.4

TNFAIP3-206, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFAIP3, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-206ENST00000612899 SAGE1Q9NXZ1 904 aa11.69□□□□□ -0.54
TNFAIP3-206ENST00000612899 LRP5O75197 1615 aa11.69□□□□□ -0.54
TNFAIP3-206ENST00000612899 SRPX2O60687 465 aaPredicted RBP11.69□□□□□ -0.54
TNFAIP3-206ENST00000612899 ZDHHC11BP0C7U3 371 aa11.69□□□□□ -0.54
TNFAIP3-206ENST00000612899 CFL1P23528 166 aaKnown RBP11.69□□□□□ -0.54
TNFAIP3-206ENST00000612899 ACVR1Q04771 509 aa11.69□□□□□ -0.54
TNFAIP3-206ENST00000612899 EIF2B1Q14232 305 aaKnown RBP11.69□□□□□ -0.54
TNFAIP3-206ENST00000612899 GPR18Q14330 331 aa11.69□□□□□ -0.54
TNFAIP3-206ENST00000612899 SPCS2Q15005 226 aa11.69□□□□□ -0.54
TNFAIP3-206ENST00000612899 ZNF750Q32MQ0 723 aa11.69□□□□□ -0.54
TNFAIP3-206ENST00000612899 MTFR2Q6P444 385 aa11.69□□□□□ -0.54
TNFAIP3-206ENST00000612899 ADAMTSL4Q6UY14 1074 aa11.69□□□□□ -0.54
TNFAIP3-206ENST00000612899 LAS2Q8IYD9 372 aa11.69□□□□□ -0.54
TNFAIP3-206ENST00000612899 LURAP1Q96LR2 239 aa11.69□□□□□ -0.54
TNFAIP3-206ENST00000612899 FOLH1BQ9HBA9 442 aa11.69□□□□□ -0.54
TNFAIP3-206ENST00000612899 OLAHQ9NV23 265 aa11.69□□□□□ -0.54
TNFAIP3-206ENST00000612899 COPZ2Q9P299 210 aa11.69□□□□□ -0.54
TNFAIP3-206ENST00000612899 KLHL9Q9P2J3 617 aa11.69□□□□□ -0.54
TNFAIP3-206ENST00000612899 ATG4BQ9Y4P1 393 aa11.69□□□□□ -0.54
TNFAIP3-206ENST00000612899 ASB1Q9Y576 335 aa11.69□□□□□ -0.54
TNFAIP3-206ENST00000612899 SPTA1P02549 2419 aa11.68□□□□□ -0.54
TNFAIP3-206ENST00000612899 SLC16A7O60669 478 aa11.68□□□□□ -0.54
TNFAIP3-206ENST00000612899 CDK10Q15131 360 aa11.68□□□□□ -0.54
TNFAIP3-206ENST00000612899 TMEM205Q6UW68 189 aa11.68□□□□□ -0.54
TNFAIP3-206ENST00000612899 ANGPTL6Q8NI99 470 aa11.68□□□□□ -0.54
TNFAIP3-206ENST00000612899 TMEM163Q8TC26 289 aa11.68□□□□□ -0.54
TNFAIP3-206ENST00000612899 CD300AQ9UGN4 299 aa11.68□□□□□ -0.54
TNFAIP3-206ENST00000612899 HEMK1Q9Y5R4 338 aaPredicted RBP11.68□□□□□ -0.54
TNFAIP3-206ENST00000612899 MAST2Q6P0Q8 1798 aa11.68□□□□□ -0.54
TNFAIP3-206ENST00000612899 MEGF11A6BM72 1044 aa11.68□□□□□ -0.54
TNFAIP3-206ENST00000612899 SULT2B1O00204 365 aa11.68□□□□□ -0.54
TNFAIP3-206ENST00000612899 CRTAPO75718 401 aaPredicted RBP11.68□□□□□ -0.54
TNFAIP3-206ENST00000612899 PAHP00439 452 aa11.68□□□□□ -0.54
TNFAIP3-206ENST00000612899 F13BP05160 661 aa11.68□□□□□ -0.54
TNFAIP3-206ENST00000612899 NUDT1P36639 197 aa11.68□□□□□ -0.54
TNFAIP3-206ENST00000612899 CSNK1G2P78368 415 aa11.68□□□□□ -0.54
TNFAIP3-206ENST00000612899 ANKRD33Q7Z3H0 272 aa11.68□□□□□ -0.54
TNFAIP3-206ENST00000612899 OR13C2Q8NGS9 318 aa11.68□□□□□ -0.54
TNFAIP3-206ENST00000612899 TM4SF18Q96CE8 201 aa11.68□□□□□ -0.54
TNFAIP3-206ENST00000612899 EPHX3Q9H6B9 360 aa11.68□□□□□ -0.54
TNFAIP3-206ENST00000612899 RANBP3Q9H6Z4 567 aaPredicted RBP11.68□□□□□ -0.54
TNFAIP3-206ENST00000612899 PHIPQ8WWQ0 1821 aa11.68□□□□□ -0.54
TNFAIP3-206ENST00000612899 AGAP5A6NIR3 686 aa11.68□□□□□ -0.54
TNFAIP3-206ENST00000612899 PRRT4C9JH25 899 aa11.68□□□□□ -0.54
TNFAIP3-206ENST00000612899 RP2O75695 350 aa11.68□□□□□ -0.54
TNFAIP3-206ENST00000612899 GPX2P18283 190 aa11.68□□□□□ -0.54
TNFAIP3-206ENST00000612899 PRSS3P35030 304 aa11.68□□□□□ -0.54
TNFAIP3-206ENST00000612899 PBX2P40425 430 aa11.68□□□□□ -0.54
TNFAIP3-206ENST00000612899 SNRPD2P62316 118 aaKnown RBP11.68□□□□□ -0.54
TNFAIP3-206ENST00000612899 TNFRSF17Q02223 184 aa11.68□□□□□ -0.54
TNFAIP3-206ENST00000612899 TSPAN31Q12999 210 aa11.68□□□□□ -0.54
TNFAIP3-206ENST00000612899 KIAA0895LQ68EN5 471 aa11.68□□□□□ -0.54
TNFAIP3-206ENST00000612899 AWAT2Q6E213 333 aa11.68□□□□□ -0.54
TNFAIP3-206ENST00000612899 COMMD7Q86VX2 200 aa11.68□□□□□ -0.54
TNFAIP3-206ENST00000612899 DEDD2Q8WXF8 326 aa11.68□□□□□ -0.54
TNFAIP3-206ENST00000612899 INTS14Q96SY0 518 aa11.68□□□□□ -0.54
TNFAIP3-206ENST00000612899 LMF2Q9BU23 707 aaKnown RBP11.68□□□□□ -0.54
TNFAIP3-206ENST00000612899 HDAC8Q9BY41 377 aa11.68□□□□□ -0.54
TNFAIP3-206ENST00000612899 MMP28Q9H239 520 aa11.68□□□□□ -0.54
TNFAIP3-206ENST00000612899 PDFQ9HBH1 243 aa11.68□□□□□ -0.54
TNFAIP3-206ENST00000612899 HHATLQ9HCP6 504 aa11.68□□□□□ -0.54
TNFAIP3-206ENST00000612899 FGF22Q9HCT0 170 aa11.68□□□□□ -0.54
TNFAIP3-206ENST00000612899 CUTCQ9NTM9 273 aa11.68□□□□□ -0.54
TNFAIP3-206ENST00000612899 BABAM2Q9NXR7 383 aa11.68□□□□□ -0.54
TNFAIP3-206ENST00000612899 B4GALT3O60512 393 aa11.68□□□□□ -0.54
TNFAIP3-206ENST00000612899 UPK1BO75841 260 aa11.68□□□□□ -0.54
TNFAIP3-206ENST00000612899 AKR1C4P17516 323 aa11.68□□□□□ -0.54
TNFAIP3-206ENST00000612899 SLC2A5P22732 501 aa11.68□□□□□ -0.54
TNFAIP3-206ENST00000612899 CTHP32929 405 aa11.68□□□□□ -0.54
TNFAIP3-206ENST00000612899 NKPD1Q17RQ9 610 aa11.68□□□□□ -0.54
TNFAIP3-206ENST00000612899 FAM76BQ5HYJ3 339 aa11.68□□□□□ -0.54
TNFAIP3-206ENST00000612899 ZNF322Q6U7Q0 402 aaPredicted RBP11.68□□□□□ -0.54
TNFAIP3-206ENST00000612899 PTRH1Q86Y79 214 aaKnown RBP11.68□□□□□ -0.54
TNFAIP3-206ENST00000612899 BEST3Q8N1M1 668 aa11.68□□□□□ -0.54
TNFAIP3-206ENST00000612899 FTMTQ8N4E7 242 aa11.68□□□□□ -0.54
TNFAIP3-206ENST00000612899 HYLS1Q96M11 299 aa11.68□□□□□ -0.54
TNFAIP3-206ENST00000612899 ASB16Q96NS5 453 aa11.68□□□□□ -0.54
TNFAIP3-206ENST00000612899 SCPEP1Q9HB40 452 aa11.68□□□□□ -0.54
TNFAIP3-206ENST00000612899 INIPQ9NRY2 104 aa11.68□□□□□ -0.54
TNFAIP3-206ENST00000612899 COQ3Q9NZJ6 369 aa11.68□□□□□ -0.54
TNFAIP3-206ENST00000612899 MPIG6BO95866 241 aa11.67□□□□□ -0.54
TNFAIP3-206ENST00000612899 LCATP04180 440 aa11.67□□□□□ -0.54
TNFAIP3-206ENST00000612899 HOXA9P31269 272 aa11.67□□□□□ -0.54
TNFAIP3-206ENST00000612899 CD79BP40259 229 aa11.67□□□□□ -0.54
TNFAIP3-206ENST00000612899 ZP2Q05996 745 aa11.67□□□□□ -0.54
TNFAIP3-206ENST00000612899 TDGQ13569 410 aa11.67□□□□□ -0.54
TNFAIP3-206ENST00000612899 FGL2Q14314 439 aa11.67□□□□□ -0.54
TNFAIP3-206ENST00000612899 GPR19Q15760 415 aa11.67□□□□□ -0.54
TNFAIP3-206ENST00000612899 HYAL4Q2M3T9 481 aa11.67□□□□□ -0.54
TNFAIP3-206ENST00000612899 ESCO2Q56NI9 601 aa11.67□□□□□ -0.54
TNFAIP3-206ENST00000612899 XKR7Q5GH72 579 aa11.67□□□□□ -0.54
TNFAIP3-206ENST00000612899 PARM1Q6UWI2 310 aa11.67□□□□□ -0.54
TNFAIP3-206ENST00000612899 DNAJC22Q8N4W6 341 aa11.67□□□□□ -0.54
TNFAIP3-206ENST00000612899 OR51Q1Q8NH59 317 aa11.67□□□□□ -0.54
TNFAIP3-206ENST00000612899 MBNL1Q9NR56 388 aaKnown RBP11.67□□□□□ -0.54
TNFAIP3-206ENST00000612899 DHCR7Q9UBM7 475 aaKnown RBP11.67□□□□□ -0.54
TNFAIP3-206ENST00000612899 NUP214P35658 2090 aaPredicted RBP11.67□□□□□ -0.54
TNFAIP3-206ENST00000612899 CABIN1Q9Y6J0 2220 aa11.67□□□□□ -0.54
TNFAIP3-206ENST00000612899 EEF1E1-BLOC1S5C9J1V9 151 aa11.67□□□□□ -0.54
TNFAIP3-206ENST00000612899 IGLV3-27P01718 113 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms