RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 GPR68Q15743 365 aa13.59□□□□□ -0.23
CDH1-213ENST00000612417 TRMT12Q53H54 448 aaKnown RBP13.59□□□□□ -0.23
CDH1-213ENST00000612417 CCNJQ5T5M9 372 aa13.59□□□□□ -0.23
CDH1-213ENST00000612417 MRPL2Q5T653 305 aaKnown RBP13.59□□□□□ -0.23
CDH1-213ENST00000612417 TRIQKQ629K1 86 aa13.59□□□□□ -0.23
CDH1-213ENST00000612417 MEPCEQ7L2J0 689 aaKnown RBP13.59□□□□□ -0.23
CDH1-213ENST00000612417 KLBQ86Z14 1044 aa13.59□□□□□ -0.23
CDH1-213ENST00000612417 OR4N5Q8IXE1 308 aa13.59□□□□□ -0.23
CDH1-213ENST00000612417 OR4N4Q8N0Y3 316 aa13.59□□□□□ -0.23
CDH1-213ENST00000612417 CDRT4Q8N9R6 151 aa13.59□□□□□ -0.23
CDH1-213ENST00000612417 BAHD1Q8TBE0 780 aaPredicted RBP13.59□□□□□ -0.23
CDH1-213ENST00000612417 ENKURQ8TC29 256 aa13.59□□□□□ -0.23
CDH1-213ENST00000612417 TMEM239Q8WW34 195 aa13.59□□□□□ -0.23
CDH1-213ENST00000612417 ACOT12Q8WYK0 555 aa13.59□□□□□ -0.23
CDH1-213ENST00000612417 RNF31Q96EP0 1072 aa13.59□□□□□ -0.23
CDH1-213ENST00000612417 HS6ST2Q96MM7 605 aa13.59□□□□□ -0.23
CDH1-213ENST00000612417 TIMP4Q99727 224 aa13.59□□□□□ -0.23
CDH1-213ENST00000612417 DPH1Q9BZG8 443 aa13.59□□□□□ -0.23
CDH1-213ENST00000612417 INPP5EQ9NRR6 644 aa13.59□□□□□ -0.23
CDH1-213ENST00000612417 RBFOX1Q9NWB1 397 aaKnown RBP13.59□□□□□ -0.23
CDH1-213ENST00000612417 ADAM30Q9UKF2 790 aa13.59□□□□□ -0.23
CDH1-213ENST00000612417 TMEM5Q9Y2B1 443 aa13.59□□□□□ -0.23
CDH1-213ENST00000612417 A0A1B0GVT2 93 aa13.58□□□□□ -0.24
CDH1-213ENST00000612417 FAM183AA6NL82 134 aa13.58□□□□□ -0.24
CDH1-213ENST00000612417 LMO7DNF2Z398 122 aa13.58□□□□□ -0.24
CDH1-213ENST00000612417 RNF13O43567 381 aa13.58□□□□□ -0.24
CDH1-213ENST00000612417 SLC19A2O60779 497 aa13.58□□□□□ -0.24
CDH1-213ENST00000612417 AK1P00568 194 aa13.58□□□□□ -0.24
CDH1-213ENST00000612417 CD53P19397 219 aa13.58□□□□□ -0.24
CDH1-213ENST00000612417 MAKP20794 623 aa13.58□□□□□ -0.24
CDH1-213ENST00000612417 HLA-DMAP28067 261 aa13.58□□□□□ -0.24
CDH1-213ENST00000612417 MAP3K8P41279 467 aa13.58□□□□□ -0.24
CDH1-213ENST00000612417 MAP2K3P46734 347 aa13.58□□□□□ -0.24
CDH1-213ENST00000612417 MTNR1BP49286 362 aa13.58□□□□□ -0.24
CDH1-213ENST00000612417 OR1Q1Q15612 314 aa13.58□□□□□ -0.24
CDH1-213ENST00000612417 PLBD1Q6P4A8 553 aa13.58□□□□□ -0.24
CDH1-213ENST00000612417 SMARCD3Q6STE5 483 aa13.58□□□□□ -0.24
CDH1-213ENST00000612417 TMPRSS11FQ6ZWK6 438 aa13.58□□□□□ -0.24
CDH1-213ENST00000612417 DUSP18Q8NEJ0 188 aa13.58□□□□□ -0.24
CDH1-213ENST00000612417 OR51G2Q8NGK0 314 aa13.58□□□□□ -0.24
CDH1-213ENST00000612417 KISS1RQ969F8 398 aaPredicted RBP13.58□□□□□ -0.24
CDH1-213ENST00000612417 SENP5Q96HI0 755 aaPredicted RBP13.58□□□□□ -0.24
CDH1-213ENST00000612417 UBL7Q96S82 380 aaPredicted RBP13.58□□□□□ -0.24
CDH1-213ENST00000612417 KCNJ15Q99712 375 aa13.58□□□□□ -0.24
CDH1-213ENST00000612417 TMEM43Q9BTV4 400 aa13.58□□□□□ -0.24
CDH1-213ENST00000612417 IL21RQ9HBE5 538 aa13.58□□□□□ -0.24
CDH1-213ENST00000612417 CMC2Q9NRP2 79 aa13.58□□□□□ -0.24
CDH1-213ENST00000612417 DDX28Q9NUL7 540 aaKnown RBP13.58□□□□□ -0.24
CDH1-213ENST00000612417 UCKL1Q9NWZ5 548 aa13.58□□□□□ -0.24
CDH1-213ENST00000612417 BABAM2Q9NXR7 383 aa13.58□□□□□ -0.24
CDH1-213ENST00000612417 C12orf71A8MTZ7 269 aa13.57□□□□□ -0.24
CDH1-213ENST00000612417 H0YGG7 62 aa13.57□□□□□ -0.24
CDH1-213ENST00000612417 SGK494L7N484 410 aa13.57□□□□□ -0.24
CDH1-213ENST00000612417 DNAJB6O75190 326 aa13.57□□□□□ -0.24
CDH1-213ENST00000612417 RCBTB2O95199 551 aa13.57□□□□□ -0.24
CDH1-213ENST00000612417 FAM157BP0CG42 384 aa13.57□□□□□ -0.24
CDH1-213ENST00000612417 BMP7P18075 431 aa13.57□□□□□ -0.24
CDH1-213ENST00000612417 TCEA1P23193 301 aaKnown RBP13.57□□□□□ -0.24
CDH1-213ENST00000612417 FASLGP48023 281 aa13.57□□□□□ -0.24
CDH1-213ENST00000612417 ARF3P61204 181 aaPredicted RBP13.57□□□□□ -0.24
CDH1-213ENST00000612417 QPRTQ15274 297 aa13.57□□□□□ -0.24
CDH1-213ENST00000612417 P2RY14Q15391 338 aa13.57□□□□□ -0.24
CDH1-213ENST00000612417 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.57□□□□□ -0.24
CDH1-213ENST00000612417 GARNL3Q5VVW2 1013 aa13.57□□□□□ -0.24
CDH1-213ENST00000612417 C19orf18Q8NEA5 215 aa13.57□□□□□ -0.24
CDH1-213ENST00000612417 CCDC3Q9BQI4 270 aa13.57□□□□□ -0.24
CDH1-213ENST00000612417 ALG8Q9BVK2 526 aa13.57□□□□□ -0.24
CDH1-213ENST00000612417 EVA1AQ9H8M9 152 aa13.57□□□□□ -0.24
CDH1-213ENST00000612417 ISG20L2Q9H9L3 353 aaKnown RBP13.57□□□□□ -0.24
CDH1-213ENST00000612417 B3GAT2Q9NPZ5 323 aa13.57□□□□□ -0.24
CDH1-213ENST00000612417 C20orf141Q9NUB4 165 aa13.57□□□□□ -0.24
CDH1-213ENST00000612417 TMEM74BQ9NUR3 256 aa13.57□□□□□ -0.24
CDH1-213ENST00000612417 KCNE5Q9UJ90 142 aa13.57□□□□□ -0.24
CDH1-213ENST00000612417 POMT2Q9UKY4 750 aa13.57□□□□□ -0.24
CDH1-213ENST00000612417 CD8B2A6NJW9 211 aa13.57□□□□□ -0.24
CDH1-213ENST00000612417 TRIM3O75382 744 aaPredicted RBP13.57□□□□□ -0.24
CDH1-213ENST00000612417 NCR1O76036 304 aa13.57□□□□□ -0.24
CDH1-213ENST00000612417 PROS1P07225 676 aa13.57□□□□□ -0.24
CDH1-213ENST00000612417 CD8BP10966 210 aa13.57□□□□□ -0.24
CDH1-213ENST00000612417 GALEQ14376 348 aa13.57□□□□□ -0.24
CDH1-213ENST00000612417 INSL4Q14641 139 aa13.57□□□□□ -0.24
CDH1-213ENST00000612417 CDK10Q15131 360 aa13.57□□□□□ -0.24
CDH1-213ENST00000612417 MZT2BQ6NZ67 158 aa13.57□□□□□ -0.24
CDH1-213ENST00000612417 PLET1Q6UQ28 207 aa13.57□□□□□ -0.24
CDH1-213ENST00000612417 TRILQ7L0X0 811 aa13.57□□□□□ -0.24
CDH1-213ENST00000612417 PFN4Q8NHR9 129 aa13.57□□□□□ -0.24
CDH1-213ENST00000612417 AHCYL2Q96HN2 611 aaKnown RBP13.57□□□□□ -0.24
CDH1-213ENST00000612417 RNF170Q96K19 258 aa13.57□□□□□ -0.24
CDH1-213ENST00000612417 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.57□□□□□ -0.24
CDH1-213ENST00000612417 SEMA6CQ9H3T2 930 aa13.57□□□□□ -0.24
CDH1-213ENST00000612417 ADAP2Q9NPF8 381 aa13.57□□□□□ -0.24
CDH1-213ENST00000612417 POLE3Q9NRF9 147 aa13.57□□□□□ -0.24
CDH1-213ENST00000612417 C14orf105Q9NVL8 296 aa13.57□□□□□ -0.24
CDH1-213ENST00000612417 C2orf92A0A1B0GVN3 265 aa13.56□□□□□ -0.24
CDH1-213ENST00000612417 FAM86C2PA6NEL3 165 aa13.56□□□□□ -0.24
CDH1-213ENST00000612417 SLC22A31A6NKX4 558 aa13.56□□□□□ -0.24
CDH1-213ENST00000612417 LAMTOR5O43504 91 aa13.56□□□□□ -0.24
CDH1-213ENST00000612417 PIAS2O75928 621 aa13.56□□□□□ -0.24
CDH1-213ENST00000612417 PRKAR1AP10644 381 aa13.56□□□□□ -0.24
CDH1-213ENST00000612417 IFI30P13284 250 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms