RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 MEIS3P1A6NDR6 274 aa18.91■□□□□ 0.62
SSBP3-216ENST00000610401 CLEC3AO75596 197 aa18.91■□□□□ 0.62
SSBP3-216ENST00000610401 EML2O95834 649 aa18.91■□□□□ 0.62
SSBP3-216ENST00000610401 ALDOBP05062 364 aa18.91■□□□□ 0.62
SSBP3-216ENST00000610401 RPS27P42677 84 aaKnown RBP18.91■□□□□ 0.62
SSBP3-216ENST00000610401 KIAA0907Q7Z7F0 614 aaPredicted RBP18.91■□□□□ 0.62
SSBP3-216ENST00000610401 RAB42Q8N4Z0 105 aa18.91■□□□□ 0.62
SSBP3-216ENST00000610401 IL17RCQ8NAC3 791 aa18.91■□□□□ 0.62
SSBP3-216ENST00000610401 CCL4L1Q8NHW4 92 aa18.91■□□□□ 0.62
SSBP3-216ENST00000610401 LGALS14Q8TCE9 139 aa18.91■□□□□ 0.62
SSBP3-216ENST00000610401 BPIFA2Q96DR5 249 aa18.91■□□□□ 0.62
SSBP3-216ENST00000610401 ZC3HAV1LQ96H79 300 aaKnown RBP18.91■□□□□ 0.62
SSBP3-216ENST00000610401 IL21RQ9HBE5 538 aa18.91■□□□□ 0.62
SSBP3-216ENST00000610401 CLDND1Q9NY35 253 aa18.91■□□□□ 0.62
SSBP3-216ENST00000610401 CHURC1-FNTBB4DL54 471 aa18.91■□□□□ 0.62
SSBP3-216ENST00000610401 UCHL1P09936 223 aa18.91■□□□□ 0.62
SSBP3-216ENST00000610401 CPMP14384 443 aa18.91■□□□□ 0.62
SSBP3-216ENST00000610401 TSPAN5P62079 268 aa18.91■□□□□ 0.62
SSBP3-216ENST00000610401 Q6ZTK2 550 aa18.91■□□□□ 0.62
SSBP3-216ENST00000610401 HDDC3Q8N4P3 179 aa18.91■□□□□ 0.62
SSBP3-216ENST00000610401 LINC00471Q8N535 108 aa18.91■□□□□ 0.62
SSBP3-216ENST00000610401 OR2L5Q8NG80 312 aa18.91■□□□□ 0.62
SSBP3-216ENST00000610401 OR52N1Q8NH53 320 aa18.91■□□□□ 0.62
SSBP3-216ENST00000610401 PPP1R16AQ96I34 528 aa18.91■□□□□ 0.62
SSBP3-216ENST00000610401 HS6ST2Q96MM7 605 aa18.91■□□□□ 0.62
SSBP3-216ENST00000610401 MRPS18AQ9NVS2 196 aaKnown RBP18.91■□□□□ 0.62
SSBP3-216ENST00000610401 RDH8Q9NYR8 311 aa18.91■□□□□ 0.62
SSBP3-216ENST00000610401 POLHQ9Y253 713 aa18.91■□□□□ 0.62
SSBP3-216ENST00000610401 COL4A3Q01955 1670 aa18.91■□□□□ 0.62
SSBP3-216ENST00000610401 GRXCR1A8MXD5 290 aa18.91■□□□□ 0.62
SSBP3-216ENST00000610401 SIX6O95475 246 aa18.91■□□□□ 0.62
SSBP3-216ENST00000610401 HMGN1P05114 100 aa18.91■□□□□ 0.62
SSBP3-216ENST00000610401 PVRP15151 417 aa18.91■□□□□ 0.62
SSBP3-216ENST00000610401 AP2S1P53680 142 aaPredicted RBP18.91■□□□□ 0.62
SSBP3-216ENST00000610401 ZNF761Q86XN6 746 aaPredicted RBP18.91■□□□□ 0.62
SSBP3-216ENST00000610401 FRMD1Q8N878 549 aa18.91■□□□□ 0.62
SSBP3-216ENST00000610401 OR2L3Q8NG85 312 aa18.91■□□□□ 0.62
SSBP3-216ENST00000610401 OR2T4Q8NH00 348 aa18.91■□□□□ 0.62
SSBP3-216ENST00000610401 GHITMQ9H3K2 345 aa18.91■□□□□ 0.62
SSBP3-216ENST00000610401 LOC105371267A0A1B0GV96 52 aa18.9■□□□□ 0.62
SSBP3-216ENST00000610401 ABHD14A-ACY1A0A1B0GW23 586 aa18.9■□□□□ 0.62
SSBP3-216ENST00000610401 OR7A10O76100 309 aa18.9■□□□□ 0.62
SSBP3-216ENST00000610401 IRF4Q15306 451 aa18.9■□□□□ 0.62
SSBP3-216ENST00000610401 SNX33Q8WV41 574 aa18.9■□□□□ 0.62
SSBP3-216ENST00000610401 YIPF5Q969M3 257 aa18.9■□□□□ 0.62
SSBP3-216ENST00000610401 LRIG1Q96JA1 1093 aa18.9■□□□□ 0.62
SSBP3-216ENST00000610401 ERMAPQ96PL5 475 aaPredicted RBP18.9■□□□□ 0.62
SSBP3-216ENST00000610401 FAM86C2PA6NEL3 165 aa18.9■□□□□ 0.62
SSBP3-216ENST00000610401 GPR171O14626 319 aa18.9■□□□□ 0.62
SSBP3-216ENST00000610401 IGHA1P01876 353 aa18.9■□□□□ 0.62
SSBP3-216ENST00000610401 PPM1AP35813 382 aa18.9■□□□□ 0.62
SSBP3-216ENST00000610401 KCNAB1Q14722 419 aa18.9■□□□□ 0.62
SSBP3-216ENST00000610401 DNAAF1Q8NEP3 725 aa18.9■□□□□ 0.62
SSBP3-216ENST00000610401 OR14C36Q8NHC7 312 aa18.9■□□□□ 0.62
SSBP3-216ENST00000610401 LINC00615Q96LM1 132 aaPredicted RBP18.9■□□□□ 0.62
SSBP3-216ENST00000610401 ARHGDIGQ99819 225 aa18.9■□□□□ 0.62
SSBP3-216ENST00000610401 NFKBIL1Q9UBC1 381 aaPredicted RBP18.9■□□□□ 0.62
SSBP3-216ENST00000610401 EDDM13A0A1B0GTR0 161 aa18.89■□□□□ 0.62
SSBP3-216ENST00000610401 GXYLT2A0PJZ3 443 aa18.89■□□□□ 0.62
SSBP3-216ENST00000610401 RAF1P04049 648 aa18.89■□□□□ 0.62
SSBP3-216ENST00000610401 MTNR1BP49286 362 aa18.89■□□□□ 0.62
SSBP3-216ENST00000610401 DECR1Q16698 335 aa18.89■□□□□ 0.62
SSBP3-216ENST00000610401 METAP1DQ6UB28 335 aaPredicted RBP18.89■□□□□ 0.62
SSBP3-216ENST00000610401 COX18Q8N8Q8 333 aa18.89■□□□□ 0.62
SSBP3-216ENST00000610401 KCNE5Q9UJ90 142 aa18.89■□□□□ 0.62
SSBP3-216ENST00000610401 SCML1Q9UN30 329 aa18.89■□□□□ 0.62
SSBP3-216ENST00000610401 OBSL1O75147 1896 aa18.89■□□□□ 0.61
SSBP3-216ENST00000610401 TRABD2BA6NFA1 517 aa18.89■□□□□ 0.61
SSBP3-216ENST00000610401 ADH1CP00326 375 aa18.89■□□□□ 0.61
SSBP3-216ENST00000610401 POU3F2P20265 443 aaPredicted RBP18.89■□□□□ 0.61
SSBP3-216ENST00000610401 F8A1P23610 371 aa18.89■□□□□ 0.61
SSBP3-216ENST00000610401 RPL4P36578 427 aaKnown RBP18.89■□□□□ 0.61
SSBP3-216ENST00000610401 PPM1FP49593 454 aaPredicted RBP18.89■□□□□ 0.61
SSBP3-216ENST00000610401 FAAH2Q6GMR7 532 aa18.89■□□□□ 0.61
SSBP3-216ENST00000610401 MFSD12Q6NUT3 480 aa18.89■□□□□ 0.61
SSBP3-216ENST00000610401 GLRX5Q86SX6 157 aa18.89■□□□□ 0.61
SSBP3-216ENST00000610401 GALNT6Q8NCL4 622 aa18.89■□□□□ 0.61
SSBP3-216ENST00000610401 RPLP0P6Q8NHW5 317 aa18.89■□□□□ 0.61
SSBP3-216ENST00000610401 LCN9Q8WX39 176 aa18.89■□□□□ 0.61
SSBP3-216ENST00000610401 C1QTNF2Q9BXJ5 285 aa18.89■□□□□ 0.61
SSBP3-216ENST00000610401 POT1Q9NUX5 634 aa18.89■□□□□ 0.61
SSBP3-216ENST00000610401 ASB6Q9NWX5 421 aa18.89■□□□□ 0.61
SSBP3-216ENST00000610401 ZNF69Q9UC07 566 aa18.89■□□□□ 0.61
SSBP3-216ENST00000610401 TRBV2A0A0J9YWF9 115 aa18.89■□□□□ 0.61
SSBP3-216ENST00000610401 RIIAD1A6NNX1 92 aa18.89■□□□□ 0.61
SSBP3-216ENST00000610401 H0Y8X5 98 aa18.89■□□□□ 0.61
SSBP3-216ENST00000610401 ARPC1BO15143 372 aaKnown RBP18.89■□□□□ 0.61
SSBP3-216ENST00000610401 RAD1O60671 282 aa18.89■□□□□ 0.61
SSBP3-216ENST00000610401 PEBP1P30086 187 aaKnown RBP18.89■□□□□ 0.61
SSBP3-216ENST00000610401 GDNFP39905 211 aa18.89■□□□□ 0.61
SSBP3-216ENST00000610401 RGS1Q08116 209 aa18.89■□□□□ 0.61
SSBP3-216ENST00000610401 VITQ6UXI7 678 aa18.89■□□□□ 0.61
SSBP3-216ENST00000610401 SFTPA2Q8IWL1 248 aa18.89■□□□□ 0.61
SSBP3-216ENST00000610401 OR52B4Q8NGK2 314 aa18.89■□□□□ 0.61
SSBP3-216ENST00000610401 EXOGQ9Y2C4 368 aaKnown RBP18.89■□□□□ 0.61
SSBP3-216ENST00000610401 PLXNA2O75051 1894 aa18.89■□□□□ 0.61
SSBP3-216ENST00000610401 ZNF593O00488 134 aaPredicted RBP18.88■□□□□ 0.61
SSBP3-216ENST00000610401 KHDRBS3O75525 346 aaKnown RBP18.88■□□□□ 0.61
SSBP3-216ENST00000610401 RASGRP1O95267 797 aa18.88■□□□□ 0.61
SSBP3-216ENST00000610401 SBK2P0C263 348 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms