RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 CEP19Q96LK0 163 aa11.01□□□□□ -0.65
USP6NL-206ENST00000609853 SECISBP2Q96T21 854 aaKnown RBP11.01□□□□□ -0.65
USP6NL-206ENST00000609853 NDC1Q9BTX1 674 aa11.01□□□□□ -0.65
USP6NL-206ENST00000609853 SP140LQ9H930 580 aa11.01□□□□□ -0.65
USP6NL-206ENST00000609853 EXOSC3Q9NQT5 275 aaKnown RBP11.01□□□□□ -0.65
USP6NL-206ENST00000609853 ASB6Q9NWX5 421 aa11.01□□□□□ -0.65
USP6NL-206ENST00000609853 ERVK13-1Q9NX77 482 aa11.01□□□□□ -0.65
USP6NL-206ENST00000609853 HAO2Q9NYQ3 351 aa11.01□□□□□ -0.65
USP6NL-206ENST00000609853 SERTAD3Q9UJW9 196 aa11.01□□□□□ -0.65
USP6NL-206ENST00000609853 ICAM5Q9UMF0 924 aa11.01□□□□□ -0.65
USP6NL-206ENST00000609853 SF3B6Q9Y3B4 125 aaKnown RBP11.01□□□□□ -0.65
USP6NL-206ENST00000609853 TMEM184BQ9Y519 407 aaPredicted RBP11.01□□□□□ -0.65
USP6NL-206ENST00000609853 A0A087WUJ7 227 aa11□□□□□ -0.65
USP6NL-206ENST00000609853 IGKV3D-11A0A0A0MRZ8 115 aa11□□□□□ -0.65
USP6NL-206ENST00000609853 CCDC163A0A0D9SF12 145 aa11□□□□□ -0.65
USP6NL-206ENST00000609853 K7ESF4 209 aa11□□□□□ -0.65
USP6NL-206ENST00000609853 IL33O95760 270 aa11□□□□□ -0.65
USP6NL-206ENST00000609853 CLPSP04118 112 aa11□□□□□ -0.65
USP6NL-206ENST00000609853 HLA-DPB1P04440 258 aa11□□□□□ -0.65
USP6NL-206ENST00000609853 PNMTP11086 282 aa11□□□□□ -0.65
USP6NL-206ENST00000609853 IL9P15248 144 aa11□□□□□ -0.65
USP6NL-206ENST00000609853 CD53P19397 219 aa11□□□□□ -0.65
USP6NL-206ENST00000609853 TGM1P22735 817 aa11□□□□□ -0.65
USP6NL-206ENST00000609853 ARRB1P49407 418 aaPredicted RBP11□□□□□ -0.65
USP6NL-206ENST00000609853 RNF144AP50876 292 aaPredicted RBP11□□□□□ -0.65
USP6NL-206ENST00000609853 SLC37A1P57057 533 aa11□□□□□ -0.65
USP6NL-206ENST00000609853 PSPHP78330 225 aa11□□□□□ -0.65
USP6NL-206ENST00000609853 ELAVL1Q15717 326 aaKnown RBP11□□□□□ -0.65
USP6NL-206ENST00000609853 OR2G6Q5TZ20 316 aa11□□□□□ -0.65
USP6NL-206ENST00000609853 PLBD1Q6P4A8 553 aa11□□□□□ -0.65
USP6NL-206ENST00000609853 LHFPL3Q86UP9 236 aa11□□□□□ -0.65
USP6NL-206ENST00000609853 TMEM151BQ8IW70 566 aa11□□□□□ -0.65
USP6NL-206ENST00000609853 PARP16Q8N5Y8 322 aa11□□□□□ -0.65
USP6NL-206ENST00000609853 FAM71CQ8NEG0 241 aa11□□□□□ -0.65
USP6NL-206ENST00000609853 OR4F15Q8NGB8 312 aa11□□□□□ -0.65
USP6NL-206ENST00000609853 PTPMT1Q8WUK0 201 aaPredicted RBP11□□□□□ -0.65
USP6NL-206ENST00000609853 WDFY2Q96P53 400 aa11□□□□□ -0.65
USP6NL-206ENST00000609853 SLC30A2Q9BRI3 323 aa11□□□□□ -0.65
USP6NL-206ENST00000609853 ZNF649Q9BS31 505 aa11□□□□□ -0.65
USP6NL-206ENST00000609853 CCDC32Q9BV29 185 aa11□□□□□ -0.65
USP6NL-206ENST00000609853 IL20RAQ9UHF4 553 aa11□□□□□ -0.65
USP6NL-206ENST00000609853 CLCA3PQ9Y6N3 262 aa11□□□□□ -0.65
USP6NL-206ENST00000609853 COL5A1P20908 1838 aaPredicted RBP10.99□□□□□ -0.65
USP6NL-206ENST00000609853 FUOMA2VDF0 154 aa10.99□□□□□ -0.65
USP6NL-206ENST00000609853 SLC35F4A4IF30 521 aa10.99□□□□□ -0.65
USP6NL-206ENST00000609853 FRG2CA6NGY1 282 aa10.99□□□□□ -0.65
USP6NL-206ENST00000609853 NDUFB2O95178 105 aa10.99□□□□□ -0.65
USP6NL-206ENST00000609853 SLC2A10O95528 541 aa10.99□□□□□ -0.65
USP6NL-206ENST00000609853 PNLIPP16233 465 aa10.99□□□□□ -0.65
USP6NL-206ENST00000609853 BCKDHBP21953 392 aa10.99□□□□□ -0.65
USP6NL-206ENST00000609853 HOXA6P31267 233 aa10.99□□□□□ -0.65
USP6NL-206ENST00000609853 BCAP31P51572 246 aa10.99□□□□□ -0.65
USP6NL-206ENST00000609853 IFITM3Q01628 133 aa10.99□□□□□ -0.65
USP6NL-206ENST00000609853 ISXQ2M1V0 245 aa10.99□□□□□ -0.65
USP6NL-206ENST00000609853 PERM1Q5SV97 790 aa10.99□□□□□ -0.65
USP6NL-206ENST00000609853 ZNF322Q6U7Q0 402 aaPredicted RBP10.99□□□□□ -0.65
USP6NL-206ENST00000609853 KIRREL2Q6UWL6 708 aa10.99□□□□□ -0.65
USP6NL-206ENST00000609853 GPALPP1Q8IXQ4 340 aa10.99□□□□□ -0.65
USP6NL-206ENST00000609853 SLC35F3Q8IY50 421 aa10.99□□□□□ -0.65
USP6NL-206ENST00000609853 CADM2Q8N3J6 435 aa10.99□□□□□ -0.65
USP6NL-206ENST00000609853 METTL27Q8N6F8 245 aaPredicted RBP10.99□□□□□ -0.65
USP6NL-206ENST00000609853 BBS1Q8NFJ9 593 aa10.99□□□□□ -0.65
USP6NL-206ENST00000609853 OR14A16Q8NHC5 309 aa10.99□□□□□ -0.65
USP6NL-206ENST00000609853 AP3S1Q92572 193 aa10.99□□□□□ -0.65
USP6NL-206ENST00000609853 SGTBQ96EQ0 304 aa10.99□□□□□ -0.65
USP6NL-206ENST00000609853 C1GALT1C1Q96EU7 318 aa10.99□□□□□ -0.65
USP6NL-206ENST00000609853 DCBLD2Q96PD2 775 aa10.99□□□□□ -0.65
USP6NL-206ENST00000609853 SMURF1Q9HCE7 757 aa10.99□□□□□ -0.65
USP6NL-206ENST00000609853 CPNE5Q9HCH3 593 aa10.99□□□□□ -0.65
USP6NL-206ENST00000609853 ZNF304Q9HCX3 659 aa10.99□□□□□ -0.65
USP6NL-206ENST00000609853 KLHL21Q9UJP4 597 aa10.99□□□□□ -0.65
USP6NL-206ENST00000609853 TRAPPC4Q9Y296 219 aa10.99□□□□□ -0.65
USP6NL-206ENST00000609853 PRUNE2Q8WUY3 3088 aa10.98□□□□□ -0.65
USP6NL-206ENST00000609853 SEC16AO15027 2179 aa10.98□□□□□ -0.65
USP6NL-206ENST00000609853 WWP2O00308 870 aa10.98□□□□□ -0.65
USP6NL-206ENST00000609853 SOCS6O14544 535 aa10.98□□□□□ -0.65
USP6NL-206ENST00000609853 IDH3BO43837 385 aa10.98□□□□□ -0.65
USP6NL-206ENST00000609853 ADAM11O75078 769 aa10.98□□□□□ -0.65
USP6NL-206ENST00000609853 RFPL3O75679 317 aa10.98□□□□□ -0.65
USP6NL-206ENST00000609853 APOL3O95236 402 aa10.98□□□□□ -0.65
USP6NL-206ENST00000609853 IGKV3-11P04433 115 aa10.98□□□□□ -0.65
USP6NL-206ENST00000609853 HPGDP15428 266 aa10.98□□□□□ -0.65
USP6NL-206ENST00000609853 FBLP22087 321 aaKnown RBP10.98□□□□□ -0.65
USP6NL-206ENST00000609853 ALAS2P22557 587 aa10.98□□□□□ -0.65
USP6NL-206ENST00000609853 DEFA1P59665 94 aa10.98□□□□□ -0.65
USP6NL-206ENST00000609853 DEFA3P59666 94 aa10.98□□□□□ -0.65
USP6NL-206ENST00000609853 ACTC1P68032 377 aa10.98□□□□□ -0.65
USP6NL-206ENST00000609853 ACTA1P68133 377 aa10.98□□□□□ -0.65
USP6NL-206ENST00000609853 CRYZQ08257 329 aaKnown RBP10.98□□□□□ -0.65
USP6NL-206ENST00000609853 CDC20Q12834 499 aa10.98□□□□□ -0.65
USP6NL-206ENST00000609853 SQSTM1Q13501 440 aa10.98□□□□□ -0.65
USP6NL-206ENST00000609853 CRTC2Q53ET0 693 aaPredicted RBP10.98□□□□□ -0.65
USP6NL-206ENST00000609853 WBP2NLQ6ICG8 309 aa10.98□□□□□ -0.65
USP6NL-206ENST00000609853 THSD4Q6ZMP0 1018 aa10.98□□□□□ -0.65
USP6NL-206ENST00000609853 NUP54Q7Z3B4 507 aa10.98□□□□□ -0.65
USP6NL-206ENST00000609853 LYSMD2Q8IV50 215 aa10.98□□□□□ -0.65
USP6NL-206ENST00000609853 SLC25A45Q8N413 288 aa10.98□□□□□ -0.65
USP6NL-206ENST00000609853 SLC37A3Q8NCC5 494 aa10.98□□□□□ -0.65
USP6NL-206ENST00000609853 OR4C3Q8NH37 302 aa10.98□□□□□ -0.65
USP6NL-206ENST00000609853 OR51A7Q8NH64 312 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms