RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 OPN3Q9H1Y3 402 aaPredicted RBP12.92□□□□□ -0.34
TUBE1-208ENST00000604743 RAD21L1Q9H4I0 556 aa12.92□□□□□ -0.34
TUBE1-208ENST00000604743 RABEP2Q9H5N1 569 aa12.92□□□□□ -0.34
TUBE1-208ENST00000604743 SLC24A3Q9HC58 644 aa12.92□□□□□ -0.34
TUBE1-208ENST00000604743 MCCC2Q9HCC0 563 aa12.92□□□□□ -0.34
TUBE1-208ENST00000604743 FGFR1OP2Q9NVK5 253 aa12.92□□□□□ -0.34
TUBE1-208ENST00000604743 PAQR5Q9NXK6 330 aaPredicted RBP12.92□□□□□ -0.34
TUBE1-208ENST00000604743 GALNT8Q9NY28 637 aa12.92□□□□□ -0.34
TUBE1-208ENST00000604743 SLC25A37Q9NYZ2 338 aa12.92□□□□□ -0.34
TUBE1-208ENST00000604743 CRIM1Q9NZV1 1036 aa12.92□□□□□ -0.34
TUBE1-208ENST00000604743 TRIM33Q9UPN9 1127 aa12.92□□□□□ -0.34
TUBE1-208ENST00000604743 A0A1W2PNR3 127 aa12.91□□□□□ -0.34
TUBE1-208ENST00000604743 TUBAL3A6NHL2 446 aa12.91□□□□□ -0.34
TUBE1-208ENST00000604743 NTN1O95631 604 aa12.91□□□□□ -0.34
TUBE1-208ENST00000604743 DBIP07108 87 aaKnown RBP12.91□□□□□ -0.34
TUBE1-208ENST00000604743 TFPTP0C1Z6 253 aa12.91□□□□□ -0.34
TUBE1-208ENST00000604743 SLC7A1P30825 629 aa12.91□□□□□ -0.34
TUBE1-208ENST00000604743 MAGEA8P43361 318 aa12.91□□□□□ -0.34
TUBE1-208ENST00000604743 KCNJ5P48544 419 aa12.91□□□□□ -0.34
TUBE1-208ENST00000604743 IDH2P48735 452 aaKnown RBP12.91□□□□□ -0.34
TUBE1-208ENST00000604743 CTBP2P56545 445 aa12.91□□□□□ -0.34
TUBE1-208ENST00000604743 GUCY1A3Q02108 690 aa12.91□□□□□ -0.34
TUBE1-208ENST00000604743 SELENBP1Q13228 472 aa12.91□□□□□ -0.34
TUBE1-208ENST00000604743 GNA13Q14344 377 aa12.91□□□□□ -0.34
TUBE1-208ENST00000604743 SLC25A53Q5H9E4 307 aa12.91□□□□□ -0.34
TUBE1-208ENST00000604743 PLEKHM3Q6ZWE6 761 aa12.91□□□□□ -0.34
TUBE1-208ENST00000604743 LSRQ86X29 649 aaPredicted RBP12.91□□□□□ -0.34
TUBE1-208ENST00000604743 VRK2Q86Y07 508 aa12.91□□□□□ -0.34
TUBE1-208ENST00000604743 PEX5LQ8IYB4 626 aa12.91□□□□□ -0.34
TUBE1-208ENST00000604743 FAM71CQ8NEG0 241 aa12.91□□□□□ -0.34
TUBE1-208ENST00000604743 OR52P1PQ8NH57 321 aa12.91□□□□□ -0.34
TUBE1-208ENST00000604743 SLC38A5Q8WUX1 472 aa12.91□□□□□ -0.34
TUBE1-208ENST00000604743 OIT3Q8WWZ8 545 aa12.91□□□□□ -0.34
TUBE1-208ENST00000604743 ST8SIA1Q92185 356 aa12.91□□□□□ -0.34
TUBE1-208ENST00000604743 MAL2Q969L2 176 aa12.91□□□□□ -0.34
TUBE1-208ENST00000604743 DNAJA3Q96EY1 480 aa12.91□□□□□ -0.34
TUBE1-208ENST00000604743 REXO5Q96IC2 774 aaKnown RBP12.91□□□□□ -0.34
TUBE1-208ENST00000604743 OR5B2Q96R09 309 aa12.91□□□□□ -0.34
TUBE1-208ENST00000604743 SRXN1Q9BYN0 137 aa12.91□□□□□ -0.34
TUBE1-208ENST00000604743 SLC52A3Q9NQ40 469 aa12.91□□□□□ -0.34
TUBE1-208ENST00000604743 TIGARQ9NQ88 270 aa12.91□□□□□ -0.34
TUBE1-208ENST00000604743 SERINC1Q9NRX5 453 aa12.91□□□□□ -0.34
TUBE1-208ENST00000604743 ACER3Q9NUN7 267 aa12.91□□□□□ -0.34
TUBE1-208ENST00000604743 CALML5Q9NZT1 146 aa12.91□□□□□ -0.34
TUBE1-208ENST00000604743 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.91□□□□□ -0.34
TUBE1-208ENST00000604743 PROCRQ9UNN8 238 aa12.91□□□□□ -0.34
TUBE1-208ENST00000604743 POLQO75417 2590 aa12.9□□□□□ -0.34
TUBE1-208ENST00000604743 A8MXE2 369 aa12.9□□□□□ -0.34
TUBE1-208ENST00000604743 C5orf58C9J3I9 102 aa12.9□□□□□ -0.34
TUBE1-208ENST00000604743 AP3D1O14617 1153 aa12.9□□□□□ -0.34
TUBE1-208ENST00000604743 MSTNO14793 375 aa12.9□□□□□ -0.34
TUBE1-208ENST00000604743 ADAM11O75078 769 aa12.9□□□□□ -0.34
TUBE1-208ENST00000604743 TROVE2P10155 538 aaKnown RBP eCLIP12.9□□□□□ -0.34
TUBE1-208ENST00000604743 TFPIP10646 304 aa12.9□□□□□ -0.34
TUBE1-208ENST00000604743 HOXB9P17482 250 aaPredicted RBP12.9□□□□□ -0.34
TUBE1-208ENST00000604743 CCNA2P20248 432 aa12.9□□□□□ -0.34
TUBE1-208ENST00000604743 RPS4Y1P22090 263 aaKnown RBP12.9□□□□□ -0.34
TUBE1-208ENST00000604743 PEX19P40855 299 aa12.9□□□□□ -0.34
TUBE1-208ENST00000604743 IRX1P78414 480 aaPredicted RBP12.9□□□□□ -0.34
TUBE1-208ENST00000604743 PLAURQ03405 335 aa12.9□□□□□ -0.34
TUBE1-208ENST00000604743 LRIF1Q5T3J3 769 aa12.9□□□□□ -0.34
TUBE1-208ENST00000604743 MRPL2Q5T653 305 aaKnown RBP12.9□□□□□ -0.34
TUBE1-208ENST00000604743 AP1ARQ63HQ0 302 aa12.9□□□□□ -0.34
TUBE1-208ENST00000604743 C3orf33Q6P1S2 294 aa12.9□□□□□ -0.34
TUBE1-208ENST00000604743 ZNF836Q6ZNA1 936 aa12.9□□□□□ -0.34
TUBE1-208ENST00000604743 FAM214BQ7L5A3 538 aa12.9□□□□□ -0.34
TUBE1-208ENST00000604743 MSRB3Q8IXL7 192 aa12.9□□□□□ -0.34
TUBE1-208ENST00000604743 ZNF610Q8N9Z0 462 aa12.9□□□□□ -0.34
TUBE1-208ENST00000604743 CPNE4Q96A23 557 aaPredicted RBP12.9□□□□□ -0.34
TUBE1-208ENST00000604743 SIKE1Q9BRV8 207 aa12.9□□□□□ -0.34
TUBE1-208ENST00000604743 COQ10BQ9H8M1 238 aa12.9□□□□□ -0.34
TUBE1-208ENST00000604743 CACYBPQ9HB71 228 aaKnown RBP12.9□□□□□ -0.34
TUBE1-208ENST00000604743 EXOSC3Q9NQT5 275 aaKnown RBP12.9□□□□□ -0.34
TUBE1-208ENST00000604743 CTPS2Q9NRF8 586 aa12.9□□□□□ -0.34
TUBE1-208ENST00000604743 RLIMQ9NVW2 624 aa12.9□□□□□ -0.34
TUBE1-208ENST00000604743 THUMPD1Q9NXG2 353 aaKnown RBP12.9□□□□□ -0.34
TUBE1-208ENST00000604743 DNAJB12Q9NXW2 375 aaKnown RBP12.9□□□□□ -0.34
TUBE1-208ENST00000604743 VAPAQ9P0L0 249 aa12.9□□□□□ -0.34
TUBE1-208ENST00000604743 EMC9Q9Y3B6 208 aa12.9□□□□□ -0.34
TUBE1-208ENST00000604743 FREM1Q5H8C1 2179 aa12.9□□□□□ -0.34
TUBE1-208ENST00000604743 IGHV3-15A0A0B4J1V0 119 aa12.89□□□□□ -0.35
TUBE1-208ENST00000604743 A0A1W2PP18 115 aa12.89□□□□□ -0.35
TUBE1-208ENST00000604743 ETV2O00321 342 aaPredicted RBP12.89□□□□□ -0.35
TUBE1-208ENST00000604743 DNAJA2O60884 412 aa12.89□□□□□ -0.35
TUBE1-208ENST00000604743 GKN3PP0CG01 181 aa12.89□□□□□ -0.35
TUBE1-208ENST00000604743 NID1P14543 1247 aa12.89□□□□□ -0.35
TUBE1-208ENST00000604743 ARFIP2P53365 341 aa12.89□□□□□ -0.35
TUBE1-208ENST00000604743 FAM27E3Q08E93 113 aa12.89□□□□□ -0.35
TUBE1-208ENST00000604743 FADDQ13158 208 aa12.89□□□□□ -0.35
TUBE1-208ENST00000604743 ZNF239Q16600 458 aaKnown RBP12.89□□□□□ -0.35
TUBE1-208ENST00000604743 EXOC3L2Q2M3D2 409 aa12.89□□□□□ -0.35
TUBE1-208ENST00000604743 LIN52Q52LA3 116 aa12.89□□□□□ -0.35
TUBE1-208ENST00000604743 GTF2IRD2BQ6EKJ0 949 aa12.89□□□□□ -0.35
TUBE1-208ENST00000604743 GTF2IRD2Q86UP8 949 aa12.89□□□□□ -0.35
TUBE1-208ENST00000604743 CMIPQ8IY22 773 aa12.89□□□□□ -0.35
TUBE1-208ENST00000604743 ABHD3Q8WU67 409 aa12.89□□□□□ -0.35
TUBE1-208ENST00000604743 STON2Q8WXE9 905 aa12.89□□□□□ -0.35
TUBE1-208ENST00000604743 PMM1Q92871 262 aa12.89□□□□□ -0.35
TUBE1-208ENST00000604743 GMPPAQ96IJ6 420 aaPredicted RBP12.89□□□□□ -0.35
TUBE1-208ENST00000604743 ZNF385DQ9H6B1 395 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms