RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 C3orf33Q6P1S2 294 aa11.66□□□□□ -0.54
RPS28-204ENST00000602140 SEZ6L2Q6UXD5 910 aa11.66□□□□□ -0.54
RPS28-204ENST00000602140 OLIG3Q7RTU3 272 aa11.66□□□□□ -0.54
RPS28-204ENST00000602140 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.66□□□□□ -0.54
RPS28-204ENST00000602140 C6orf120Q7Z4R8 191 aa11.66□□□□□ -0.54
RPS28-204ENST00000602140 CLECL1Q8IZS7 167 aa11.66□□□□□ -0.54
RPS28-204ENST00000602140 CLEC4FQ8N1N0 589 aa11.66□□□□□ -0.54
RPS28-204ENST00000602140 ARL8AQ96BM9 186 aa11.66□□□□□ -0.54
RPS28-204ENST00000602140 ZNF300Q96RE9 604 aaPredicted RBP11.66□□□□□ -0.54
RPS28-204ENST00000602140 NMUR2Q9GZQ4 415 aa11.66□□□□□ -0.54
RPS28-204ENST00000602140 LAT2Q9GZY6 243 aa11.66□□□□□ -0.54
RPS28-204ENST00000602140 SERHL2Q9H4I8 314 aa11.66□□□□□ -0.54
RPS28-204ENST00000602140 L2HGDHQ9H9P8 463 aa11.66□□□□□ -0.54
RPS28-204ENST00000602140 KCNE5Q9UJ90 142 aa11.66□□□□□ -0.54
RPS28-204ENST00000602140 ADAM21Q9UKJ8 722 aa11.66□□□□□ -0.54
RPS28-204ENST00000602140 MKLN1Q9UL63 735 aa11.66□□□□□ -0.54
RPS28-204ENST00000602140 LIPT1Q9Y234 373 aa11.66□□□□□ -0.54
RPS28-204ENST00000602140 MAGED1Q9Y5V3 778 aaPredicted RBP11.66□□□□□ -0.54
RPS28-204ENST00000602140 CENPVL1A0A0U1RR11 272 aa11.65□□□□□ -0.54
RPS28-204ENST00000602140 A0A1W2PP18 115 aa11.65□□□□□ -0.54
RPS28-204ENST00000602140 DUXAA6NLW8 204 aa11.65□□□□□ -0.54
RPS28-204ENST00000602140 ETV2O00321 342 aaPredicted RBP11.65□□□□□ -0.54
RPS28-204ENST00000602140 FCMRO60667 390 aa11.65□□□□□ -0.54
RPS28-204ENST00000602140 CYTIPO60759 359 aa11.65□□□□□ -0.54
RPS28-204ENST00000602140 STX11O75558 287 aa11.65□□□□□ -0.54
RPS28-204ENST00000602140 BPGMP07738 259 aa11.65□□□□□ -0.54
RPS28-204ENST00000602140 NUDT17P0C025 328 aa11.65□□□□□ -0.54
RPS28-204ENST00000602140 UBTFL6P0CB48 400 aaPredicted RBP11.65□□□□□ -0.54
RPS28-204ENST00000602140 IDUAP35475 653 aa11.65□□□□□ -0.54
RPS28-204ENST00000602140 CLDN8P56748 225 aa11.65□□□□□ -0.54
RPS28-204ENST00000602140 SESN3P58005 492 aa11.65□□□□□ -0.54
RPS28-204ENST00000602140 KRTAP1-1Q07627 177 aa11.65□□□□□ -0.54
RPS28-204ENST00000602140 IFFO1Q0D2I5 559 aa11.65□□□□□ -0.54
RPS28-204ENST00000602140 FAPQ12884 760 aa11.65□□□□□ -0.54
RPS28-204ENST00000602140 MAD2L1Q13257 205 aaPredicted RBP11.65□□□□□ -0.54
RPS28-204ENST00000602140 SKP2Q13309 424 aa11.65□□□□□ -0.54
RPS28-204ENST00000602140 ZNF141Q15928 474 aa11.65□□□□□ -0.54
RPS28-204ENST00000602140 ETFDHQ16134 617 aa11.65□□□□□ -0.54
RPS28-204ENST00000602140 PGGHGQ32M88 737 aa11.65□□□□□ -0.54
RPS28-204ENST00000602140 ARHGAP11BQ3KRB8 267 aa11.65□□□□□ -0.54
RPS28-204ENST00000602140 OR4F3Q6IEY1 312 aa11.65□□□□□ -0.54
RPS28-204ENST00000602140 ST8SIA1Q92185 356 aa11.65□□□□□ -0.54
RPS28-204ENST00000602140 ZNF75CPQ92670 426 aaPredicted RBP11.65□□□□□ -0.54
RPS28-204ENST00000602140 SLC35G5Q96KT7 338 aa11.65□□□□□ -0.54
RPS28-204ENST00000602140 TRIM2Q9C040 744 aa11.65□□□□□ -0.54
RPS28-204ENST00000602140 SERINC1Q9NRX5 453 aa11.65□□□□□ -0.54
RPS28-204ENST00000602140 LGALS13Q9UHV8 139 aa11.65□□□□□ -0.54
RPS28-204ENST00000602140 FREM1Q5H8C1 2179 aa11.64□□□□□ -0.55
RPS28-204ENST00000602140 RNF103-CHMP3A0A140T963 221 aa11.64□□□□□ -0.55
RPS28-204ENST00000602140 ZNF724A8MTY0 619 aa11.64□□□□□ -0.55
RPS28-204ENST00000602140 DNAJA2O60884 412 aa11.64□□□□□ -0.55
RPS28-204ENST00000602140 RAMP1O60894 148 aa11.64□□□□□ -0.55
RPS28-204ENST00000602140 CRLF1O75462 422 aa11.64□□□□□ -0.55
RPS28-204ENST00000602140 UGT2B17O75795 530 aa11.64□□□□□ -0.55
RPS28-204ENST00000602140 AK1P00568 194 aa11.64□□□□□ -0.55
RPS28-204ENST00000602140 CSTAP01040 98 aa11.64□□□□□ -0.55
RPS28-204ENST00000602140 FESP07332 822 aa11.64□□□□□ -0.55
RPS28-204ENST00000602140 CREB1P16220 341 aa11.64□□□□□ -0.55
RPS28-204ENST00000602140 PGCP20142 388 aa11.64□□□□□ -0.55
RPS28-204ENST00000602140 IGHV1-2P23083 117 aa11.64□□□□□ -0.55
RPS28-204ENST00000602140 ACVR1BP36896 505 aa11.64□□□□□ -0.55
RPS28-204ENST00000602140 DIO1P49895 249 aa11.64□□□□□ -0.55
RPS28-204ENST00000602140 CASP9P55211 416 aa11.64□□□□□ -0.55
RPS28-204ENST00000602140 C21orf58P58505 322 aa11.64□□□□□ -0.55
RPS28-204ENST00000602140 EMX2Q04743 252 aa11.64□□□□□ -0.55
RPS28-204ENST00000602140 MERTKQ12866 999 aa11.64□□□□□ -0.55
RPS28-204ENST00000602140 PPA1Q15181 289 aa11.64□□□□□ -0.55
RPS28-204ENST00000602140 DNAJC14Q6Y2X3 702 aaPredicted RBP11.64□□□□□ -0.55
RPS28-204ENST00000602140 TMPPEQ6ZT21 453 aa11.64□□□□□ -0.55
RPS28-204ENST00000602140 C16orf62Q7Z3J2 963 aa11.64□□□□□ -0.55
RPS28-204ENST00000602140 GALNT5Q7Z7M9 940 aa11.64□□□□□ -0.55
RPS28-204ENST00000602140 ZNF100Q8IYN0 542 aa11.64□□□□□ -0.55
RPS28-204ENST00000602140 TMEM234Q8WY98 164 aa11.64□□□□□ -0.55
RPS28-204ENST00000602140 MUCL1Q96DR8 90 aa11.64□□□□□ -0.55
RPS28-204ENST00000602140 PPP1R36Q96LQ0 422 aa11.64□□□□□ -0.55
RPS28-204ENST00000602140 REG4Q9BYZ8 158 aa11.64□□□□□ -0.55
RPS28-204ENST00000602140 NOP53Q9NZM5 478 aaKnown RBP11.64□□□□□ -0.55
RPS28-204ENST00000602140 NUP214P35658 2090 aaPredicted RBP11.63□□□□□ -0.55
RPS28-204ENST00000602140 SULT2B1O00204 365 aa11.63□□□□□ -0.55
RPS28-204ENST00000602140 RNASET2O00584 256 aaKnown RBP11.63□□□□□ -0.55
RPS28-204ENST00000602140 NDUFS7O75251 213 aa11.63□□□□□ -0.55
RPS28-204ENST00000602140 IGHV4-39P01824 125 aa11.63□□□□□ -0.55
RPS28-204ENST00000602140 GGT1P19440 569 aa11.63□□□□□ -0.55
RPS28-204ENST00000602140 CSNK2A1P68400 391 aaPredicted RBP11.63□□□□□ -0.55
RPS28-204ENST00000602140 DMTNQ08495 405 aa11.63□□□□□ -0.55
RPS28-204ENST00000602140 PDCD2Q16342 344 aaPredicted RBP11.63□□□□□ -0.55
RPS28-204ENST00000602140 MAPK14Q16539 360 aa11.63□□□□□ -0.55
RPS28-204ENST00000602140 SYT14P1Q58G82 188 aa11.63□□□□□ -0.55
RPS28-204ENST00000602140 TIMM23BQ5SRD1 257 aa11.63□□□□□ -0.55
RPS28-204ENST00000602140 HEPHL1Q6MZM0 1159 aa11.63□□□□□ -0.55
RPS28-204ENST00000602140 EIF3MQ7L2H7 374 aaKnown RBP11.63□□□□□ -0.55
RPS28-204ENST00000602140 NUDCD3Q8IVD9 361 aa11.63□□□□□ -0.55
RPS28-204ENST00000602140 OR4A15Q8NGL6 344 aa11.63□□□□□ -0.55
RPS28-204ENST00000602140 XAGE5Q8WWM1 108 aa11.63□□□□□ -0.55
RPS28-204ENST00000602140 TRAF4Q9BUZ4 470 aaPredicted RBP11.63□□□□□ -0.55
RPS28-204ENST00000602140 ROPN1BQ9BZX4 212 aaPredicted RBP11.63□□□□□ -0.55
RPS28-204ENST00000602140 ZNF350Q9GZX5 532 aa11.63□□□□□ -0.55
RPS28-204ENST00000602140 SLCO5A1Q9H2Y9 848 aa11.63□□□□□ -0.55
RPS28-204ENST00000602140 OR51I1Q9H343 314 aa11.63□□□□□ -0.55
RPS28-204ENST00000602140 ALG2Q9H553 416 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms