RNA–Protein interactions for RNA: ENST00000600190.1

FARP1-229, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-229ENST00000600190 VDAC3Q9Y277 283 aa16.89■□□□□ 0.29
FARP1-229ENST00000600190 EMC9Q9Y3B6 208 aa16.89■□□□□ 0.29
FARP1-229ENST00000600190 EVPLLA8MZ36 301 aa16.88■□□□□ 0.29
FARP1-229ENST00000600190 SCDO00767 359 aa16.88■□□□□ 0.29
FARP1-229ENST00000600190 THBDP07204 575 aa16.88■□□□□ 0.29
FARP1-229ENST00000600190 PPIBP23284 216 aaKnown RBP16.88■□□□□ 0.29
FARP1-229ENST00000600190 MAGEA8P43361 318 aa16.88■□□□□ 0.29
FARP1-229ENST00000600190 SLC6A8P48029 635 aa16.88■□□□□ 0.29
FARP1-229ENST00000600190 PTH2RP49190 550 aa16.88■□□□□ 0.29
FARP1-229ENST00000600190 SEC24CP53992 1094 aa16.88■□□□□ 0.29
FARP1-229ENST00000600190 GYS2P54840 703 aa16.88■□□□□ 0.29
FARP1-229ENST00000600190 CTBP2P56545 445 aa16.88■□□□□ 0.29
FARP1-229ENST00000600190 HPCAP84074 193 aa16.88■□□□□ 0.29
FARP1-229ENST00000600190 GRAMD1BQ3KR37 738 aa16.88■□□□□ 0.29
FARP1-229ENST00000600190 SAXO2Q658L1 398 aa16.88■□□□□ 0.29
FARP1-229ENST00000600190 APOOLQ6UXV4 268 aa16.88■□□□□ 0.29
FARP1-229ENST00000600190 GGNQ86UU5 652 aa16.88■□□□□ 0.29
FARP1-229ENST00000600190 CLEC4FQ8N1N0 589 aa16.88■□□□□ 0.29
FARP1-229ENST00000600190 GSX2Q9BZM3 304 aa16.88■□□□□ 0.29
FARP1-229ENST00000600190 PLSCR4Q9NRQ2 329 aa16.88■□□□□ 0.29
FARP1-229ENST00000600190 UBQLN4Q9NRR5 601 aa16.88■□□□□ 0.29
FARP1-229ENST00000600190 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.87■□□□□ 0.29
FARP1-229ENST00000600190 KIAA1324LA8MWY0 1029 aaPredicted RBP16.87■□□□□ 0.29
FARP1-229ENST00000600190 H3BNH8 94 aa16.87■□□□□ 0.29
FARP1-229ENST00000600190 CNOT4O95628 575 aaKnown RBP16.87■□□□□ 0.29
FARP1-229ENST00000600190 IGKV1D-16P01601 117 aa16.87■□□□□ 0.29
FARP1-229ENST00000600190 OPN1LWP04000 364 aa16.87■□□□□ 0.29
FARP1-229ENST00000600190 OR12D1P0DN82 309 aa16.87■□□□□ 0.29
FARP1-229ENST00000600190 CRATP43155 626 aa16.87■□□□□ 0.29
FARP1-229ENST00000600190 PPP2R2BQ00005 443 aa16.87■□□□□ 0.29
FARP1-229ENST00000600190 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.87■□□□□ 0.29
FARP1-229ENST00000600190 TMEM44Q2T9K0 475 aa16.87■□□□□ 0.29
FARP1-229ENST00000600190 BEX5Q5H9J7 111 aa16.87■□□□□ 0.29
FARP1-229ENST00000600190 DCST2Q5T1A1 773 aa16.87■□□□□ 0.29
FARP1-229ENST00000600190 CGB2Q6NT52 195 aa16.87■□□□□ 0.29
FARP1-229ENST00000600190 TNFAIP8L2Q6P589 184 aaPredicted RBP16.87■□□□□ 0.29
FARP1-229ENST00000600190 SLC2A7Q6PXP3 512 aa16.87■□□□□ 0.29
FARP1-229ENST00000600190 GALNT10Q86SR1 603 aa16.87■□□□□ 0.29
FARP1-229ENST00000600190 FUNDC1Q8IVP5 155 aa16.87■□□□□ 0.29
FARP1-229ENST00000600190 OR5D16Q8NGK9 328 aa16.87■□□□□ 0.29
FARP1-229ENST00000600190 OR6K3Q8NGY3 331 aa16.87■□□□□ 0.29
FARP1-229ENST00000600190 FAM110BQ8TC76 370 aa16.87■□□□□ 0.29
FARP1-229ENST00000600190 MIPOL1Q8TD10 442 aa16.87■□□□□ 0.29
FARP1-229ENST00000600190 GTF2H4Q92759 462 aa16.87■□□□□ 0.29
FARP1-229ENST00000600190 OTUB1Q96FW1 271 aaPredicted RBP16.87■□□□□ 0.29
FARP1-229ENST00000600190 GMPPAQ96IJ6 420 aaPredicted RBP16.87■□□□□ 0.29
FARP1-229ENST00000600190 TPT1P8Q9HAU6 139 aa16.87■□□□□ 0.29
FARP1-229ENST00000600190 CORO2BQ9UQ03 480 aa16.87■□□□□ 0.29
FARP1-229ENST00000600190 LIPT1Q9Y234 373 aa16.87■□□□□ 0.29
FARP1-229ENST00000600190 RAI1Q7Z5J4 1906 aaPredicted RBP16.87■□□□□ 0.29
FARP1-229ENST00000600190 TLN2Q9Y4G6 2542 aa16.86■□□□□ 0.29
FARP1-229ENST00000600190 A0A096LPI6 279 aa16.86■□□□□ 0.29
FARP1-229ENST00000600190 IGLV3-32A0A0A0MS00 114 aa16.86■□□□□ 0.29
FARP1-229ENST00000600190 INAFM1C9JVW0 142 aa16.86■□□□□ 0.29
FARP1-229ENST00000600190 SLC22A2O15244 555 aa16.86■□□□□ 0.29
FARP1-229ENST00000600190 KLF4O43474 513 aa16.86■□□□□ 0.29
FARP1-229ENST00000600190 STX11O75558 287 aa16.86■□□□□ 0.29
FARP1-229ENST00000600190 PPP3CBP16298 524 aa16.86■□□□□ 0.29
FARP1-229ENST00000600190 CDKN2CP42773 168 aa16.86■□□□□ 0.29
FARP1-229ENST00000600190 GNA13Q14344 377 aa16.86■□□□□ 0.29
FARP1-229ENST00000600190 ARHGAP11BQ3KRB8 267 aa16.86■□□□□ 0.29
FARP1-229ENST00000600190 GPAT3Q53EU6 434 aa16.86■□□□□ 0.29
FARP1-229ENST00000600190 DNAJC14Q6Y2X3 702 aaPredicted RBP16.86■□□□□ 0.29
FARP1-229ENST00000600190 ZNF704Q6ZNC4 412 aaPredicted RBP16.86■□□□□ 0.29
FARP1-229ENST00000600190 RNF130Q86XS8 419 aa16.86■□□□□ 0.29
FARP1-229ENST00000600190 OR10D3Q8NH80 312 aa16.86■□□□□ 0.29
FARP1-229ENST00000600190 TMEM171Q8WVE6 324 aa16.86■□□□□ 0.29
FARP1-229ENST00000600190 MDFIQ99750 246 aa16.86■□□□□ 0.29
FARP1-229ENST00000600190 CACYBPQ9HB71 228 aaKnown RBP16.86■□□□□ 0.29
FARP1-229ENST00000600190 MCTS1Q9ULC4 181 aaKnown RBP16.86■□□□□ 0.29
FARP1-229ENST00000600190 PCDHB14Q9Y5E9 798 aa16.86■□□□□ 0.29
FARP1-229ENST00000600190 CLIC1O00299 241 aa16.85■□□□□ 0.29
FARP1-229ENST00000600190 NDUFB5O43674 189 aa16.85■□□□□ 0.29
FARP1-229ENST00000600190 SYNGR4O95473 234 aa16.85■□□□□ 0.29
FARP1-229ENST00000600190 PLAUP00749 431 aa16.85■□□□□ 0.29
FARP1-229ENST00000600190 CASP9P55211 416 aa16.85■□□□□ 0.29
FARP1-229ENST00000600190 RPS26P62854 115 aaKnown RBP16.85■□□□□ 0.29
FARP1-229ENST00000600190 CCNJQ5T5M9 372 aa16.85■□□□□ 0.29
FARP1-229ENST00000600190 ALKBH2Q6NS38 261 aa16.85■□□□□ 0.29
FARP1-229ENST00000600190 STAC2Q6ZMT1 411 aa16.85■□□□□ 0.29
FARP1-229ENST00000600190 WFDC8Q8IUA0 241 aa16.85■□□□□ 0.29
FARP1-229ENST00000600190 MISPQ8IVT2 679 aa16.85■□□□□ 0.29
FARP1-229ENST00000600190 GATSQ8NAP1 163 aa16.85■□□□□ 0.29
FARP1-229ENST00000600190 PCYOX1LQ8NBM8 494 aa16.85■□□□□ 0.29
FARP1-229ENST00000600190 ZFP90Q8TF47 636 aa16.85■□□□□ 0.29
FARP1-229ENST00000600190 C10orf82Q8WW14 230 aa16.85■□□□□ 0.29
FARP1-229ENST00000600190 PLPPR2Q96GM1 343 aa16.85■□□□□ 0.29
FARP1-229ENST00000600190 SDF2Q99470 211 aa16.85■□□□□ 0.29
FARP1-229ENST00000600190 FANCFQ9NPI8 374 aa16.85■□□□□ 0.29
FARP1-229ENST00000600190 SAR1AQ9NR31 198 aa16.85■□□□□ 0.29
FARP1-229ENST00000600190 POLE3Q9NRF9 147 aa16.85■□□□□ 0.29
FARP1-229ENST00000600190 CALML5Q9NZT1 146 aa16.85■□□□□ 0.29
FARP1-229ENST00000600190 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.85■□□□□ 0.29
FARP1-229ENST00000600190 CAPN7Q9Y6W3 813 aa16.85■□□□□ 0.29
FARP1-229ENST00000600190 HIVEP2P31629 2446 aa16.84■□□□□ 0.29
FARP1-229ENST00000600190 GTPBP1O00178 669 aaKnown RBP16.84■□□□□ 0.29
FARP1-229ENST00000600190 CXCL13O43927 109 aa16.84■□□□□ 0.29
FARP1-229ENST00000600190 SS18L1O75177 396 aaPredicted RBP16.84■□□□□ 0.29
FARP1-229ENST00000600190 NR2F1P10589 423 aa16.84■□□□□ 0.29
FARP1-229ENST00000600190 ZNF17P17021 662 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms