RNA–Protein interactions for RNA: ENST00000599716.5

SHKBP1-220, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-220ENST00000599716 ZFP28Q8NHY6 868 aa7.61□□□□□ -1.19
SHKBP1-220ENST00000599716 FAM76AQ8TAV0 307 aa7.61□□□□□ -1.19
SHKBP1-220ENST00000599716 C3orf49Q96BT1 292 aa7.61□□□□□ -1.19
SHKBP1-220ENST00000599716 C1orf50Q9BV19 199 aa7.61□□□□□ -1.19
SHKBP1-220ENST00000599716 BEX2Q9BXY8 128 aa7.61□□□□□ -1.19
SHKBP1-220ENST00000599716 PIGUQ9H490 435 aa7.61□□□□□ -1.19
SHKBP1-220ENST00000599716 SERHL2Q9H4I8 314 aa7.61□□□□□ -1.19
SHKBP1-220ENST00000599716 BCO1Q9HAY6 547 aa7.61□□□□□ -1.19
SHKBP1-220ENST00000599716 TIGARQ9NQ88 270 aa7.61□□□□□ -1.19
SHKBP1-220ENST00000599716 NTMQ9P121 344 aa7.61□□□□□ -1.19
SHKBP1-220ENST00000599716 KCNE5Q9UJ90 142 aa7.61□□□□□ -1.19
SHKBP1-220ENST00000599716 POU2F3Q9UKI9 436 aa7.61□□□□□ -1.19
SHKBP1-220ENST00000599716 STK38LQ9Y2H1 464 aa7.61□□□□□ -1.19
SHKBP1-220ENST00000599716 ARFGEF3Q5TH69 2177 aa7.61□□□□□ -1.19
SHKBP1-220ENST00000599716 TTC36A6NLP5 189 aa7.6□□□□□ -1.19
SHKBP1-220ENST00000599716 CCT8L1PA6NM43 557 aa7.6□□□□□ -1.19
SHKBP1-220ENST00000599716 AZIN1O14977 448 aa7.6□□□□□ -1.19
SHKBP1-220ENST00000599716 LSM1O15116 133 aaKnown RBP7.6□□□□□ -1.19
SHKBP1-220ENST00000599716 PLIN3O60664 434 aa7.6□□□□□ -1.19
SHKBP1-220ENST00000599716 CYTIPO60759 359 aa7.6□□□□□ -1.19
SHKBP1-220ENST00000599716 C6orf47O95873 294 aa7.6□□□□□ -1.19
SHKBP1-220ENST00000599716 C1QCP02747 245 aa7.6□□□□□ -1.19
SHKBP1-220ENST00000599716 SHBGP04278 402 aa7.6□□□□□ -1.19
SHKBP1-220ENST00000599716 NUDT7P0C024 238 aa7.6□□□□□ -1.19
SHKBP1-220ENST00000599716 UBTFL6P0CB48 400 aaPredicted RBP7.6□□□□□ -1.19
SHKBP1-220ENST00000599716 UROSP10746 265 aa7.6□□□□□ -1.19
SHKBP1-220ENST00000599716 CCNA2P20248 432 aa7.6□□□□□ -1.19
SHKBP1-220ENST00000599716 COX5AP20674 150 aa7.6□□□□□ -1.19
SHKBP1-220ENST00000599716 EIF1P41567 113 aaKnown RBP7.6□□□□□ -1.19
SHKBP1-220ENST00000599716 SERPINB4P48594 390 aa7.6□□□□□ -1.19
SHKBP1-220ENST00000599716 FABP6P51161 128 aa7.6□□□□□ -1.19
SHKBP1-220ENST00000599716 RAC3P60763 192 aa7.6□□□□□ -1.19
SHKBP1-220ENST00000599716 SELENBP1Q13228 472 aa7.6□□□□□ -1.19
SHKBP1-220ENST00000599716 GGTLC2Q14390 218 aa7.6□□□□□ -1.19
SHKBP1-220ENST00000599716 PTGR1Q14914 329 aa7.6□□□□□ -1.19
SHKBP1-220ENST00000599716 RAB35Q15286 201 aa7.6□□□□□ -1.19
SHKBP1-220ENST00000599716 GPR68Q15743 365 aa7.6□□□□□ -1.19
SHKBP1-220ENST00000599716 SPDYE7PQ495Y7 208 aa7.6□□□□□ -1.19
SHKBP1-220ENST00000599716 AGAP6Q5VW22 663 aa7.6□□□□□ -1.19
SHKBP1-220ENST00000599716 MISPQ8IVT2 679 aa7.6□□□□□ -1.19
SHKBP1-220ENST00000599716 C10orf107Q8IVU9 208 aa7.6□□□□□ -1.19
SHKBP1-220ENST00000599716 CCDC103Q8IW40 242 aa7.6□□□□□ -1.19
SHKBP1-220ENST00000599716 DDIASQ8IXT1 998 aa7.6□□□□□ -1.19
SHKBP1-220ENST00000599716 ZNF100Q8IYN0 542 aa7.6□□□□□ -1.19
SHKBP1-220ENST00000599716 C4orf33Q8N1A6 199 aa7.6□□□□□ -1.19
SHKBP1-220ENST00000599716 MUC15Q8N387 334 aa7.6□□□□□ -1.19
SHKBP1-220ENST00000599716 KRTCAP2Q8N6L1 136 aa7.6□□□□□ -1.19
SHKBP1-220ENST00000599716 OR52E4Q8NGH9 312 aa7.6□□□□□ -1.19
SHKBP1-220ENST00000599716 ADAMTS15Q8TE58 950 aa7.6□□□□□ -1.19
SHKBP1-220ENST00000599716 MUCL1Q96DR8 90 aa7.6□□□□□ -1.19
SHKBP1-220ENST00000599716 FCRL1Q96LA6 429 aa7.6□□□□□ -1.19
SHKBP1-220ENST00000599716 OR7D2Q96RA2 312 aa7.6□□□□□ -1.19
SHKBP1-220ENST00000599716 CCT7Q99832 543 aa7.6□□□□□ -1.19
SHKBP1-220ENST00000599716 THUMPD3Q9BV44 507 aaKnown RBP7.6□□□□□ -1.19
SHKBP1-220ENST00000599716 OR11A1Q9GZK7 315 aa7.6□□□□□ -1.19
SHKBP1-220ENST00000599716 BARX1Q9HBU1 254 aaPredicted RBP7.6□□□□□ -1.19
SHKBP1-220ENST00000599716 CBLN4Q9NTU7 201 aa7.6□□□□□ -1.19
SHKBP1-220ENST00000599716 GPATCH2Q9NW75 528 aa7.6□□□□□ -1.19
SHKBP1-220ENST00000599716 KLHL9Q9P2J3 617 aa7.6□□□□□ -1.19
SHKBP1-220ENST00000599716 PSMC3IPQ9P2W1 217 aaPredicted RBP7.6□□□□□ -1.19
SHKBP1-220ENST00000599716 GPC6Q9Y625 555 aaPredicted RBP7.6□□□□□ -1.19
SHKBP1-220ENST00000599716 CIB4A0PJX0 185 aa7.59□□□□□ -1.19
SHKBP1-220ENST00000599716 NPIPB9F8W1W9 429 aa7.59□□□□□ -1.19
SHKBP1-220ENST00000599716 SLC28A1O00337 649 aa7.59□□□□□ -1.19
SHKBP1-220ENST00000599716 PIP5K1BO14986 540 aa7.59□□□□□ -1.19
SHKBP1-220ENST00000599716 SCAMP2O15127 329 aaKnown RBP7.59□□□□□ -1.19
SHKBP1-220ENST00000599716 RGS14O43566 566 aa7.59□□□□□ -1.19
SHKBP1-220ENST00000599716 FCMRO60667 390 aa7.59□□□□□ -1.19
SHKBP1-220ENST00000599716 PEX11AO75192 247 aa7.59□□□□□ -1.19
SHKBP1-220ENST00000599716 GLRA3O75311 464 aa7.59□□□□□ -1.19
SHKBP1-220ENST00000599716 SKAP2O75563 359 aaPredicted RBP7.59□□□□□ -1.19
SHKBP1-220ENST00000599716 ABHD2P08910 425 aa7.59□□□□□ -1.19
SHKBP1-220ENST00000599716 TFPIP10646 304 aa7.59□□□□□ -1.19
SHKBP1-220ENST00000599716 UBL4AP11441 157 aa7.59□□□□□ -1.19
SHKBP1-220ENST00000599716 CPA3P15088 417 aa7.59□□□□□ -1.19
SHKBP1-220ENST00000599716 DDX5P17844 614 aaKnown RBP7.59□□□□□ -1.19
SHKBP1-220ENST00000599716 PRPH2P23942 346 aa7.59□□□□□ -1.19
SHKBP1-220ENST00000599716 CD40P25942 277 aa7.59□□□□□ -1.19
SHKBP1-220ENST00000599716 RYKP34925 604 aa7.59□□□□□ -1.19
SHKBP1-220ENST00000599716 SOAT1P35610 550 aa7.59□□□□□ -1.19
SHKBP1-220ENST00000599716 CCT3P49368 545 aaKnown RBP7.59□□□□□ -1.19
SHKBP1-220ENST00000599716 DIO1P49895 249 aa7.59□□□□□ -1.19
SHKBP1-220ENST00000599716 ATP12AP54707 1039 aa7.59□□□□□ -1.19
SHKBP1-220ENST00000599716 SESN3P58005 492 aa7.59□□□□□ -1.19
SHKBP1-220ENST00000599716 VLDLRP98155 873 aa7.59□□□□□ -1.19
SHKBP1-220ENST00000599716 MERTKQ12866 999 aa7.59□□□□□ -1.19
SHKBP1-220ENST00000599716 CARTPTQ16568 116 aa7.59□□□□□ -1.19
SHKBP1-220ENST00000599716 TIMM23BQ5SRD1 257 aa7.59□□□□□ -1.19
SHKBP1-220ENST00000599716 DNAJC14Q6Y2X3 702 aaPredicted RBP7.59□□□□□ -1.19
SHKBP1-220ENST00000599716 FBXL14Q8N1E6 418 aa7.59□□□□□ -1.19
SHKBP1-220ENST00000599716 SLC43A2Q8N370 569 aa7.59□□□□□ -1.19
SHKBP1-220ENST00000599716 ZNF527Q8NB42 609 aa7.59□□□□□ -1.19
SHKBP1-220ENST00000599716 OR5W2Q8NH69 310 aa7.59□□□□□ -1.19
SHKBP1-220ENST00000599716 C10orf105Q8TEF2 133 aa7.59□□□□□ -1.19
SHKBP1-220ENST00000599716 FAM168AQ92567 244 aa7.59□□□□□ -1.19
SHKBP1-220ENST00000599716 C1orf159Q96HA4 380 aa7.59□□□□□ -1.19
SHKBP1-220ENST00000599716 RADILQ96JH8 1075 aa7.59□□□□□ -1.19
SHKBP1-220ENST00000599716 ARL5BQ96KC2 179 aa7.59□□□□□ -1.19
SHKBP1-220ENST00000599716 MRGPRX4Q96LA9 322 aa7.59□□□□□ -1.19
SHKBP1-220ENST00000599716 C3orf30Q96M34 536 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms