RNA–Protein interactions for RNA: ENST00000598471.1

UPF1-206, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-206ENST00000598471 URB1O60287 2271 aaKnown RBP14.07□□□□□ -0.16
UPF1-206ENST00000598471 SH3PXD2BA1X283 911 aa14.07□□□□□ -0.16
UPF1-206ENST00000598471 ELOA3DA6NLF2 546 aaPredicted RBP14.07□□□□□ -0.16
UPF1-206ENST00000598471 CDC40O60508 579 aaKnown RBP eCLIP14.07□□□□□ -0.16
UPF1-206ENST00000598471 CEACAM4O75871 244 aa14.07□□□□□ -0.16
UPF1-206ENST00000598471 CD46P15529 392 aa14.07□□□□□ -0.16
UPF1-206ENST00000598471 ZNF26P17031 533 aaPredicted RBP14.07□□□□□ -0.16
UPF1-206ENST00000598471 CDH2P19022 906 aaPredicted RBP14.07□□□□□ -0.16
UPF1-206ENST00000598471 CNR1P21554 472 aa14.07□□□□□ -0.16
UPF1-206ENST00000598471 RBM34P42696 430 aaKnown RBP14.07□□□□□ -0.16
UPF1-206ENST00000598471 HTR3AP46098 478 aa14.07□□□□□ -0.16
UPF1-206ENST00000598471 HSPA13P48723 471 aa14.07□□□□□ -0.16
UPF1-206ENST00000598471 UGT2B15P54855 530 aa14.07□□□□□ -0.16
UPF1-206ENST00000598471 TMPRSS3P57727 454 aa14.07□□□□□ -0.16
UPF1-206ENST00000598471 TLE3Q04726 772 aa14.07□□□□□ -0.16
UPF1-206ENST00000598471 LAPTM4AQ15012 233 aa14.07□□□□□ -0.16
UPF1-206ENST00000598471 QPRTQ15274 297 aa14.07□□□□□ -0.16
UPF1-206ENST00000598471 RFX4Q33E94 735 aa14.07□□□□□ -0.16
UPF1-206ENST00000598471 ELOA3BQ3SY89 546 aa14.07□□□□□ -0.16
UPF1-206ENST00000598471 OR5M10Q6IEU7 315 aa14.07□□□□□ -0.16
UPF1-206ENST00000598471 PODNL1Q6PEZ8 512 aa14.07□□□□□ -0.16
UPF1-206ENST00000598471 RNF113BQ8IZP6 322 aaKnown RBP14.07□□□□□ -0.16
UPF1-206ENST00000598471 HS3ST5Q8IZT8 346 aa14.07□□□□□ -0.16
UPF1-206ENST00000598471 FDCSPQ8NFU4 85 aa14.07□□□□□ -0.16
UPF1-206ENST00000598471 ELOA3Q8NG57 546 aa14.07□□□□□ -0.16
UPF1-206ENST00000598471 OR2M3Q8NG83 312 aa14.07□□□□□ -0.16
UPF1-206ENST00000598471 OR4K5Q8NGD3 323 aa14.07□□□□□ -0.16
UPF1-206ENST00000598471 OR1J4Q8NGS1 313 aa14.07□□□□□ -0.16
UPF1-206ENST00000598471 PIGXQ8TBF5 258 aa14.07□□□□□ -0.16
UPF1-206ENST00000598471 MAGEE2Q8TD90 523 aaPredicted RBP14.07□□□□□ -0.16
UPF1-206ENST00000598471 TM9SF4Q92544 642 aa14.07□□□□□ -0.16
UPF1-206ENST00000598471 HAS2Q92819 552 aa14.07□□□□□ -0.16
UPF1-206ENST00000598471 C3orf49Q96BT1 292 aa14.07□□□□□ -0.16
UPF1-206ENST00000598471 FUZQ9BT04 418 aa14.07□□□□□ -0.16
UPF1-206ENST00000598471 DSN1Q9H410 356 aa14.07□□□□□ -0.16
UPF1-206ENST00000598471 BOKQ9UMX3 212 aaPredicted RBP14.07□□□□□ -0.16
UPF1-206ENST00000598471 MGAT4BQ9UQ53 548 aa14.07□□□□□ -0.16
UPF1-206ENST00000598471 KLF13Q9Y2Y9 288 aaPredicted RBP14.07□□□□□ -0.16
UPF1-206ENST00000598471 PCDHGB6Q9Y5F9 930 aa14.07□□□□□ -0.16
UPF1-206ENST00000598471 NINQ8N4C6 2090 aa14.06□□□□□ -0.16
UPF1-206ENST00000598471 FRYQ5TBA9 3013 aa14.06□□□□□ -0.16
UPF1-206ENST00000598471 A0A087WZY1 265 aa14.06□□□□□ -0.16
UPF1-206ENST00000598471 C17orf51A8MQB3 221 aa14.06□□□□□ -0.16
UPF1-206ENST00000598471 GNB5O14775 395 aa14.06□□□□□ -0.16
UPF1-206ENST00000598471 NEURL1O76050 574 aa14.06□□□□□ -0.16
UPF1-206ENST00000598471 F10P00742 488 aa14.06□□□□□ -0.16
UPF1-206ENST00000598471 THY1P04216 161 aa14.06□□□□□ -0.16
UPF1-206ENST00000598471 ALPLP05186 524 aa14.06□□□□□ -0.16
UPF1-206ENST00000598471 PRKACGP22612 351 aa14.06□□□□□ -0.16
UPF1-206ENST00000598471 IGFBP5P24593 272 aa14.06□□□□□ -0.16
UPF1-206ENST00000598471 RAD23AP54725 363 aa14.06□□□□□ -0.16
UPF1-206ENST00000598471 PPP2R2BQ00005 443 aa14.06□□□□□ -0.16
UPF1-206ENST00000598471 SPINK14Q6IE38 97 aa14.06□□□□□ -0.16
UPF1-206ENST00000598471 FAHD1Q6P587 224 aa14.06□□□□□ -0.16
UPF1-206ENST00000598471 TTC33Q6PID6 262 aaPredicted RBP14.06□□□□□ -0.16
UPF1-206ENST00000598471 TBPL2Q6SJ96 375 aa14.06□□□□□ -0.16
UPF1-206ENST00000598471 MBOAT2Q6ZWT7 520 aa14.06□□□□□ -0.16
UPF1-206ENST00000598471 GRINAQ7Z429 371 aa14.06□□□□□ -0.16
UPF1-206ENST00000598471 ZNF227Q86WZ6 799 aa14.06□□□□□ -0.16
UPF1-206ENST00000598471 NKAIN4Q8IVV8 208 aa14.06□□□□□ -0.16
UPF1-206ENST00000598471 FADS6Q8N9I5 356 aa14.06□□□□□ -0.16
UPF1-206ENST00000598471 AQP11Q8NBQ7 271 aa14.06□□□□□ -0.16
UPF1-206ENST00000598471 TMEM239Q8WW34 195 aa14.06□□□□□ -0.16
UPF1-206ENST00000598471 NTNG2Q96CW9 530 aa14.06□□□□□ -0.16
UPF1-206ENST00000598471 JSRP1Q96MG2 331 aaPredicted RBP14.06□□□□□ -0.16
UPF1-206ENST00000598471 RDH12Q96NR8 316 aa14.06□□□□□ -0.16
UPF1-206ENST00000598471 ZNF184Q99676 751 aaPredicted RBP14.06□□□□□ -0.16
UPF1-206ENST00000598471 SLC29A1Q99808 456 aa14.06□□□□□ -0.16
UPF1-206ENST00000598471 FAM173AQ9BQD7 235 aa14.06□□□□□ -0.16
UPF1-206ENST00000598471 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.06□□□□□ -0.16
UPF1-206ENST00000598471 PLA2G3Q9NZ20 509 aa14.06□□□□□ -0.16
UPF1-206ENST00000598471 ENOPH1Q9UHY7 261 aa14.06□□□□□ -0.16
UPF1-206ENST00000598471 TMEM5Q9Y2B1 443 aa14.06□□□□□ -0.16
UPF1-206ENST00000598471 MED31Q9Y3C7 131 aa14.06□□□□□ -0.16
UPF1-206ENST00000598471 MAGED1Q9Y5V3 778 aaPredicted RBP14.06□□□□□ -0.16
UPF1-206ENST00000598471 CPAMD8Q8IZJ3 1885 aa14.06□□□□□ -0.16
UPF1-206ENST00000598471 ASPMQ8IZT6 3477 aa14.05□□□□□ -0.16
UPF1-206ENST00000598471 A0A087WUU8 490 aa14.05□□□□□ -0.16
UPF1-206ENST00000598471 G3V3Y1 287 aa14.05□□□□□ -0.16
UPF1-206ENST00000598471 K7ENP7 123 aa14.05□□□□□ -0.16
UPF1-206ENST00000598471 TRIM3O75382 744 aaPredicted RBP14.05□□□□□ -0.16
UPF1-206ENST00000598471 CBR3O75828 277 aa14.05□□□□□ -0.16
UPF1-206ENST00000598471 LYPD3O95274 346 aa14.05□□□□□ -0.16
UPF1-206ENST00000598471 ADAP00813 363 aa14.05□□□□□ -0.16
UPF1-206ENST00000598471 CXCR1P25024 350 aa14.05□□□□□ -0.16
UPF1-206ENST00000598471 TACR3P29371 465 aa14.05□□□□□ -0.16
UPF1-206ENST00000598471 DNASE1L1P49184 302 aa14.05□□□□□ -0.16
UPF1-206ENST00000598471 POLR2HP52434 150 aaKnown RBP14.05□□□□□ -0.16
UPF1-206ENST00000598471 SEC23BQ15437 767 aa14.05□□□□□ -0.16
UPF1-206ENST00000598471 TIGD3Q6B0B8 471 aa14.05□□□□□ -0.16
UPF1-206ENST00000598471 SLC25A25Q6KCM7 469 aa14.05□□□□□ -0.16
UPF1-206ENST00000598471 INO80CQ6PI98 192 aaPredicted RBP14.05□□□□□ -0.16
UPF1-206ENST00000598471 IGFL2Q6UWQ7 119 aa14.05□□□□□ -0.16
UPF1-206ENST00000598471 ATG4DQ86TL0 474 aaPredicted RBP14.05□□□□□ -0.16
UPF1-206ENST00000598471 CDK20Q8IZL9 346 aa14.05□□□□□ -0.16
UPF1-206ENST00000598471 WDSUB1Q8N9V3 476 aa14.05□□□□□ -0.16
UPF1-206ENST00000598471 TMEM178AQ8NBL3 297 aa14.05□□□□□ -0.16
UPF1-206ENST00000598471 MDS2Q8NDY4 140 aa14.05□□□□□ -0.16
UPF1-206ENST00000598471 OR9Q2Q8NGE9 314 aa14.05□□□□□ -0.16
UPF1-206ENST00000598471 TMEM255BQ8WV15 326 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms