RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 TOMM34Q15785 309 aaPredicted RBP13.52□□□□□ -0.25
TGFB1-202ENST00000597453 ZNF239Q16600 458 aaKnown RBP13.52□□□□□ -0.25
TGFB1-202ENST00000597453 DCST2Q5T1A1 773 aa13.52□□□□□ -0.25
TGFB1-202ENST00000597453 C20orf204Q6ZNR8 217 aa13.52□□□□□ -0.25
TGFB1-202ENST00000597453 MSANTD1Q6ZTZ1 278 aa13.52□□□□□ -0.25
TGFB1-202ENST00000597453 CIARTQ8N365 385 aaPredicted RBP13.52□□□□□ -0.25
TGFB1-202ENST00000597453 OR9I1Q8NGQ6 314 aa13.52□□□□□ -0.25
TGFB1-202ENST00000597453 FBXO27Q8NI29 283 aa13.52□□□□□ -0.25
TGFB1-202ENST00000597453 ADAMTS15Q8TE58 950 aa13.52□□□□□ -0.25
TGFB1-202ENST00000597453 RNF128Q8TEB7 428 aa13.52□□□□□ -0.25
TGFB1-202ENST00000597453 ABHD3Q8WU67 409 aa13.52□□□□□ -0.25
TGFB1-202ENST00000597453 PERPQ96FX8 193 aa13.52□□□□□ -0.25
TGFB1-202ENST00000597453 SLC35G5Q96KT7 338 aa13.52□□□□□ -0.25
TGFB1-202ENST00000597453 SRXN1Q9BYN0 137 aa13.52□□□□□ -0.25
TGFB1-202ENST00000597453 CCDC134Q9H6E4 229 aa13.52□□□□□ -0.25
TGFB1-202ENST00000597453 C12orf49Q9H741 205 aa13.52□□□□□ -0.25
TGFB1-202ENST00000597453 NPHS2Q9NP85 383 aa13.52□□□□□ -0.25
TGFB1-202ENST00000597453 GLRX2Q9NS18 164 aa13.52□□□□□ -0.25
TGFB1-202ENST00000597453 CARD8Q9Y2G2 431 aa13.52□□□□□ -0.25
TGFB1-202ENST00000597453 FAM234BA2RU67 622 aa13.51□□□□□ -0.25
TGFB1-202ENST00000597453 NPIPB9F8W1W9 429 aa13.51□□□□□ -0.25
TGFB1-202ENST00000597453 ARHGEF9O43307 516 aa13.51□□□□□ -0.25
TGFB1-202ENST00000597453 PPP3CBP16298 524 aa13.51□□□□□ -0.25
TGFB1-202ENST00000597453 EIF1P41567 113 aaKnown RBP13.51□□□□□ -0.25
TGFB1-202ENST00000597453 ATP4BP51164 291 aa13.51□□□□□ -0.25
TGFB1-202ENST00000597453 POLR2JP52435 117 aaKnown RBP13.51□□□□□ -0.25
TGFB1-202ENST00000597453 CARD18P57730 90 aa13.51□□□□□ -0.25
TGFB1-202ENST00000597453 BEX5Q5H9J7 111 aa13.51□□□□□ -0.25
TGFB1-202ENST00000597453 PDSS1Q5T2R2 415 aa13.51□□□□□ -0.25
TGFB1-202ENST00000597453 SAXO2Q658L1 398 aa13.51□□□□□ -0.25
TGFB1-202ENST00000597453 CLEC9AQ6UXN8 241 aa13.51□□□□□ -0.25
TGFB1-202ENST00000597453 C6orf120Q7Z4R8 191 aa13.51□□□□□ -0.25
TGFB1-202ENST00000597453 YTHDF3Q7Z739 585 aaKnown RBP13.51□□□□□ -0.25
TGFB1-202ENST00000597453 WFDC8Q8IUA0 241 aa13.51□□□□□ -0.25
TGFB1-202ENST00000597453 CLEC4FQ8N1N0 589 aa13.51□□□□□ -0.25
TGFB1-202ENST00000597453 TRIML2Q8N7C3 387 aa13.51□□□□□ -0.25
TGFB1-202ENST00000597453 OR5D16Q8NGK9 328 aa13.51□□□□□ -0.25
TGFB1-202ENST00000597453 RFWD2Q8NHY2 731 aa13.51□□□□□ -0.25
TGFB1-202ENST00000597453 MIPOL1Q8TD10 442 aa13.51□□□□□ -0.25
TGFB1-202ENST00000597453 NEURL3Q96EH8 262 aa13.51□□□□□ -0.25
TGFB1-202ENST00000597453 COX4I2Q96KJ9 171 aa13.51□□□□□ -0.25
TGFB1-202ENST00000597453 Q96MF0 132 aa13.51□□□□□ -0.25
TGFB1-202ENST00000597453 OR7D2Q96RA2 312 aa13.51□□□□□ -0.25
TGFB1-202ENST00000597453 PANX1Q96RD7 426 aa13.51□□□□□ -0.25
TGFB1-202ENST00000597453 ACTR6Q9GZN1 396 aa13.51□□□□□ -0.25
TGFB1-202ENST00000597453 SERHL2Q9H4I8 314 aa13.51□□□□□ -0.25
TGFB1-202ENST00000597453 COQ10BQ9H8M1 238 aa13.51□□□□□ -0.25
TGFB1-202ENST00000597453 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.51□□□□□ -0.25
TGFB1-202ENST00000597453 CSPG4Q6UVK1 2322 aa13.51□□□□□ -0.25
TGFB1-202ENST00000597453 DUXAA6NLW8 204 aa13.5□□□□□ -0.25
TGFB1-202ENST00000597453 H7C1Q1 480 aa13.5□□□□□ -0.25
TGFB1-202ENST00000597453 NTN1O95631 604 aa13.5□□□□□ -0.25
TGFB1-202ENST00000597453 NUDT14O95848 222 aa13.5□□□□□ -0.25
TGFB1-202ENST00000597453 PLAUP00749 431 aa13.5□□□□□ -0.25
TGFB1-202ENST00000597453 PRKCAP17252 672 aa13.5□□□□□ -0.25
TGFB1-202ENST00000597453 MATN1P21941 496 aa13.5□□□□□ -0.25
TGFB1-202ENST00000597453 ELK4P28324 431 aa13.5□□□□□ -0.25
TGFB1-202ENST00000597453 P2RX1P51575 399 aa13.5□□□□□ -0.25
TGFB1-202ENST00000597453 ATP12AP54707 1039 aa13.5□□□□□ -0.25
TGFB1-202ENST00000597453 RPS26P62854 115 aaKnown RBP13.5□□□□□ -0.25
TGFB1-202ENST00000597453 GUCY1A3Q02108 690 aa13.5□□□□□ -0.25
TGFB1-202ENST00000597453 TIGD2Q4W5G0 525 aa13.5□□□□□ -0.25
TGFB1-202ENST00000597453 ZNF704Q6ZNC4 412 aaPredicted RBP13.5□□□□□ -0.25
TGFB1-202ENST00000597453 BEND4Q6ZU67 534 aa13.5□□□□□ -0.25
TGFB1-202ENST00000597453 NUFIP2Q7Z417 695 aaKnown RBP13.5□□□□□ -0.25
TGFB1-202ENST00000597453 ZNF614Q8N883 585 aa13.5□□□□□ -0.25
TGFB1-202ENST00000597453 ZNF527Q8NB42 609 aa13.5□□□□□ -0.25
TGFB1-202ENST00000597453 ATP6V1C2Q8NEY4 427 aa13.5□□□□□ -0.25
TGFB1-202ENST00000597453 GPR119Q8TDV5 335 aa13.5□□□□□ -0.25
TGFB1-202ENST00000597453 IGFBPL1Q8WX77 278 aa13.5□□□□□ -0.25
TGFB1-202ENST00000597453 THOC1Q96FV9 657 aaKnown RBP13.5□□□□□ -0.25
TGFB1-202ENST00000597453 SLC35A5Q9BS91 424 aa13.5□□□□□ -0.25
TGFB1-202ENST00000597453 INPP5KQ9BT40 448 aa13.5□□□□□ -0.25
TGFB1-202ENST00000597453 HOXD1Q9GZZ0 328 aa13.5□□□□□ -0.25
TGFB1-202ENST00000597453 RMND5AQ9H871 391 aa13.5□□□□□ -0.25
TGFB1-202ENST00000597453 TMEM45AQ9NWC5 275 aa13.5□□□□□ -0.25
TGFB1-202ENST00000597453 DCTN4Q9UJW0 460 aa13.5□□□□□ -0.25
TGFB1-202ENST00000597453 JMJD1CQ15652 2540 aa13.49□□□□□ -0.25
TGFB1-202ENST00000597453 CENPVL1A0A0U1RR11 272 aa13.49□□□□□ -0.25
TGFB1-202ENST00000597453 TRIM64A6NGJ6 449 aa13.49□□□□□ -0.25
TGFB1-202ENST00000597453 TRIM64BA6NI03 449 aa13.49□□□□□ -0.25
TGFB1-202ENST00000597453 CCDC154A6NI56 674 aa13.49□□□□□ -0.25
TGFB1-202ENST00000597453 H3BNH8 94 aa13.49□□□□□ -0.25
TGFB1-202ENST00000597453 RFXANKO14593 260 aa13.49□□□□□ -0.25
TGFB1-202ENST00000597453 AGR2O95994 175 aa13.49□□□□□ -0.25
TGFB1-202ENST00000597453 AK1P00568 194 aa13.49□□□□□ -0.25
TGFB1-202ENST00000597453 TROVE2P10155 538 aaKnown RBP eCLIP13.49□□□□□ -0.25
TGFB1-202ENST00000597453 PSMB1P20618 241 aaKnown RBP13.49□□□□□ -0.25
TGFB1-202ENST00000597453 ADH6P28332 368 aa13.49□□□□□ -0.25
TGFB1-202ENST00000597453 CHI3L1P36222 383 aaPredicted RBP13.49□□□□□ -0.25
TGFB1-202ENST00000597453 MDH1P40925 334 aaKnown RBP13.49□□□□□ -0.25
TGFB1-202ENST00000597453 CDKN2CP42773 168 aa13.49□□□□□ -0.25
TGFB1-202ENST00000597453 SUMO3P55854 103 aaPredicted RBP13.49□□□□□ -0.25
TGFB1-202ENST00000597453 SQLEQ14534 574 aa13.49□□□□□ -0.25
TGFB1-202ENST00000597453 TSC22D1Q15714 1073 aa13.49□□□□□ -0.25
TGFB1-202ENST00000597453 TMEM176BQ3YBM2 270 aaPredicted RBP13.49□□□□□ -0.25
TGFB1-202ENST00000597453 OLIG3Q7RTU3 272 aa13.49□□□□□ -0.25
TGFB1-202ENST00000597453 STK32CQ86UX6 486 aa13.49□□□□□ -0.25
TGFB1-202ENST00000597453 TUSC5Q8IXB3 177 aa13.49□□□□□ -0.25
TGFB1-202ENST00000597453 CPNE4Q96A23 557 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms