RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 USH1CQ9Y6N9 552 aa9.4□□□□□ -0.9
CCDC9-203ENST00000596938 MAP1AP78559 2803 aaPredicted RBP9.39□□□□□ -0.91
CCDC9-203ENST00000596938 AGAP5A6NIR3 686 aa9.39□□□□□ -0.91
CCDC9-203ENST00000596938 DIAPH2O60879 1101 aa9.39□□□□□ -0.91
CCDC9-203ENST00000596938 CYP7B1O75881 506 aa9.39□□□□□ -0.91
CCDC9-203ENST00000596938 PRKD3O94806 890 aa9.39□□□□□ -0.91
CCDC9-203ENST00000596938 H6PDO95479 791 aa9.39□□□□□ -0.91
CCDC9-203ENST00000596938 GSNP06396 782 aa9.39□□□□□ -0.91
CCDC9-203ENST00000596938 UBTFL6P0CB48 400 aaPredicted RBP9.39□□□□□ -0.91
CCDC9-203ENST00000596938 PPP3CBP16298 524 aa9.39□□□□□ -0.91
CCDC9-203ENST00000596938 DNASE1P24855 282 aa9.39□□□□□ -0.91
CCDC9-203ENST00000596938 APOBEC1P41238 236 aaKnown RBP9.39□□□□□ -0.91
CCDC9-203ENST00000596938 CCR4P51679 360 aa9.39□□□□□ -0.91
CCDC9-203ENST00000596938 POLR2JP52435 117 aaKnown RBP9.39□□□□□ -0.91
CCDC9-203ENST00000596938 ART1P52961 327 aa9.39□□□□□ -0.91
CCDC9-203ENST00000596938 MVDP53602 400 aa9.39□□□□□ -0.91
CCDC9-203ENST00000596938 SYPL1Q16563 259 aa9.39□□□□□ -0.91
CCDC9-203ENST00000596938 PPP4R4Q6NUP7 873 aa9.39□□□□□ -0.91
CCDC9-203ENST00000596938 C3orf33Q6P1S2 294 aa9.39□□□□□ -0.91
CCDC9-203ENST00000596938 BEND4Q6ZU67 534 aa9.39□□□□□ -0.91
CCDC9-203ENST00000596938 MIER2Q8N344 545 aa9.39□□□□□ -0.91
CCDC9-203ENST00000596938 ANKFN1Q8N957 763 aa9.39□□□□□ -0.91
CCDC9-203ENST00000596938 LRRC8CQ8TDW0 803 aa9.39□□□□□ -0.91
CCDC9-203ENST00000596938 SLC25A43Q8WUT9 341 aaPredicted RBP9.39□□□□□ -0.91
CCDC9-203ENST00000596938 ROBO4Q8WZ75 1007 aa9.39□□□□□ -0.91
CCDC9-203ENST00000596938 ITCHQ96J02 903 aa9.39□□□□□ -0.91
CCDC9-203ENST00000596938 TACO1Q9BSH4 297 aaKnown RBP9.39□□□□□ -0.91
CCDC9-203ENST00000596938 MED18Q9BUE0 208 aa9.39□□□□□ -0.91
CCDC9-203ENST00000596938 SRXN1Q9BYN0 137 aa9.39□□□□□ -0.91
CCDC9-203ENST00000596938 OR10A4Q9H209 315 aa9.39□□□□□ -0.91
CCDC9-203ENST00000596938 SLC38A1Q9H2H9 487 aa9.39□□□□□ -0.91
CCDC9-203ENST00000596938 RMND5AQ9H871 391 aa9.39□□□□□ -0.91
CCDC9-203ENST00000596938 COQ10BQ9H8M1 238 aa9.39□□□□□ -0.91
CCDC9-203ENST00000596938 CCM2LQ9NUG4 571 aaPredicted RBP9.39□□□□□ -0.91
CCDC9-203ENST00000596938 HRNRQ86YZ3 2850 aaPredicted RBP9.39□□□□□ -0.91
CCDC9-203ENST00000596938 ANKRD17O75179 2603 aaKnown RBP9.38□□□□□ -0.91
CCDC9-203ENST00000596938 DOCK7Q96N67 2140 aa9.38□□□□□ -0.91
CCDC9-203ENST00000596938 FAM234BA2RU67 622 aa9.38□□□□□ -0.91
CCDC9-203ENST00000596938 YES1P07947 543 aa9.38□□□□□ -0.91
CCDC9-203ENST00000596938 CHRM4P08173 479 aa9.38□□□□□ -0.91
CCDC9-203ENST00000596938 NR2F1P10589 423 aa9.38□□□□□ -0.91
CCDC9-203ENST00000596938 ENPP1P22413 925 aa9.38□□□□□ -0.91
CCDC9-203ENST00000596938 CRYGSP22914 178 aa9.38□□□□□ -0.91
CCDC9-203ENST00000596938 AGTR1P30556 359 aa9.38□□□□□ -0.91
CCDC9-203ENST00000596938 SLC7A1P30825 629 aa9.38□□□□□ -0.91
CCDC9-203ENST00000596938 CCKARP32238 428 aa9.38□□□□□ -0.91
CCDC9-203ENST00000596938 CLK1P49759 484 aaKnown RBP9.38□□□□□ -0.91
CCDC9-203ENST00000596938 IDH3AP50213 366 aa9.38□□□□□ -0.91
CCDC9-203ENST00000596938 HPCAP84074 193 aa9.38□□□□□ -0.91
CCDC9-203ENST00000596938 MERTKQ12866 999 aa9.38□□□□□ -0.91
CCDC9-203ENST00000596938 GNA13Q14344 377 aa9.38□□□□□ -0.91
CCDC9-203ENST00000596938 EXOC3L2Q2M3D2 409 aa9.38□□□□□ -0.91
CCDC9-203ENST00000596938 COX20Q5RI15 118 aa9.38□□□□□ -0.91
CCDC9-203ENST00000596938 TMEM201Q5SNT2 666 aa9.38□□□□□ -0.91
CCDC9-203ENST00000596938 STAC2Q6ZMT1 411 aa9.38□□□□□ -0.91
CCDC9-203ENST00000596938 TMPPEQ6ZT21 453 aa9.38□□□□□ -0.91
CCDC9-203ENST00000596938 PLEKHM3Q6ZWE6 761 aa9.38□□□□□ -0.91
CCDC9-203ENST00000596938 FCRLAQ7L513 359 aa9.38□□□□□ -0.91
CCDC9-203ENST00000596938 HDXQ7Z353 690 aa9.38□□□□□ -0.91
CCDC9-203ENST00000596938 STK32CQ86UX6 486 aa9.38□□□□□ -0.91
CCDC9-203ENST00000596938 ARFGAP2Q8N6H7 521 aa9.38□□□□□ -0.91
CCDC9-203ENST00000596938 ATP6V1C2Q8NEY4 427 aa9.38□□□□□ -0.91
CCDC9-203ENST00000596938 ABHD3Q8WU67 409 aa9.38□□□□□ -0.91
CCDC9-203ENST00000596938 CCDC28BQ9BUN5 200 aa9.38□□□□□ -0.91
CCDC9-203ENST00000596938 CCDC106Q9BWC9 280 aa9.38□□□□□ -0.91
CCDC9-203ENST00000596938 HDHD5Q9BXW7 423 aa9.38□□□□□ -0.91
CCDC9-203ENST00000596938 KLHL4Q9C0H6 718 aa9.38□□□□□ -0.91
CCDC9-203ENST00000596938 QRSL1Q9H0R6 528 aaKnown RBP9.38□□□□□ -0.91
CCDC9-203ENST00000596938 VIPAS39Q9H9C1 493 aa9.38□□□□□ -0.91
CCDC9-203ENST00000596938 BCO1Q9HAY6 547 aa9.38□□□□□ -0.91
CCDC9-203ENST00000596938 SLCO1B3Q9NPD5 702 aa9.38□□□□□ -0.91
CCDC9-203ENST00000596938 SLC6A13Q9NSD5 602 aa9.38□□□□□ -0.91
CCDC9-203ENST00000596938 TMEM45AQ9NWC5 275 aa9.38□□□□□ -0.91
CCDC9-203ENST00000596938 THUMPD1Q9NXG2 353 aaKnown RBP9.38□□□□□ -0.91
CCDC9-203ENST00000596938 KLHL28Q9NXS3 571 aa9.38□□□□□ -0.91
CCDC9-203ENST00000596938 KLHL13Q9P2N7 655 aa9.38□□□□□ -0.91
CCDC9-203ENST00000596938 GPR52Q9Y2T5 361 aa9.38□□□□□ -0.91
CCDC9-203ENST00000596938 UQCRHLA0A096LP55 91 aa9.37□□□□□ -0.91
CCDC9-203ENST00000596938 A0A1W2PNR3 127 aa9.37□□□□□ -0.91
CCDC9-203ENST00000596938 A0A1W2PPR1 153 aa9.37□□□□□ -0.91
CCDC9-203ENST00000596938 CLDN24A6NM45 220 aa9.37□□□□□ -0.91
CCDC9-203ENST00000596938 DEFB108AA8MXU0 73 aa9.37□□□□□ -0.91
CCDC9-203ENST00000596938 HMGB1P1B2RPK0 211 aaPredicted RBP9.37□□□□□ -0.91
CCDC9-203ENST00000596938 FAAHO00519 579 aa9.37□□□□□ -0.91
CCDC9-203ENST00000596938 BCAS1O75363 584 aaPredicted RBP9.37□□□□□ -0.91
CCDC9-203ENST00000596938 ATE1O95260 518 aa9.37□□□□□ -0.91
CCDC9-203ENST00000596938 ANP32DO95626 131 aa9.37□□□□□ -0.91
CCDC9-203ENST00000596938 RAF1P04049 648 aa9.37□□□□□ -0.91
CCDC9-203ENST00000596938 DBIP07108 87 aaKnown RBP9.37□□□□□ -0.91
CCDC9-203ENST00000596938 TFPTP0C1Z6 253 aa9.37□□□□□ -0.91
CCDC9-203ENST00000596938 IL7RP16871 459 aa9.37□□□□□ -0.91
CCDC9-203ENST00000596938 PSMB1P20618 241 aaKnown RBP9.37□□□□□ -0.91
CCDC9-203ENST00000596938 RPS4Y1P22090 263 aaKnown RBP9.37□□□□□ -0.91
CCDC9-203ENST00000596938 RYKP34925 604 aa9.37□□□□□ -0.91
CCDC9-203ENST00000596938 HTR3AP46098 478 aa9.37□□□□□ -0.91
CCDC9-203ENST00000596938 MAP2K6P52564 334 aa9.37□□□□□ -0.91
CCDC9-203ENST00000596938 CSNK2A1P68400 391 aaPredicted RBP9.37□□□□□ -0.91
CCDC9-203ENST00000596938 IRX1P78414 480 aaPredicted RBP9.37□□□□□ -0.91
CCDC9-203ENST00000596938 PLAURQ03405 335 aa9.37□□□□□ -0.91
CCDC9-203ENST00000596938 MAPK11Q15759 364 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms