RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 GIMD1P0DJR0 217 aa18.11■□□□□ 0.49
CLIP3-206ENST00000593074 ATP6V1E1P36543 226 aa18.11■□□□□ 0.49
CLIP3-206ENST00000593074 ARRB1P49407 418 aaPredicted RBP18.11■□□□□ 0.49
CLIP3-206ENST00000593074 CFHR1Q03591 330 aa18.11■□□□□ 0.49
CLIP3-206ENST00000593074 SNAP47Q5SQN1 464 aa18.11■□□□□ 0.49
CLIP3-206ENST00000593074 MAMSTRQ6ZN01 415 aa18.11■□□□□ 0.49
CLIP3-206ENST00000593074 OAFQ86UD1 273 aa18.11■□□□□ 0.49
CLIP3-206ENST00000593074 FAM83FQ8NEG4 500 aaPredicted RBP18.11■□□□□ 0.49
CLIP3-206ENST00000593074 OR51G2Q8NGK0 314 aa18.11■□□□□ 0.49
CLIP3-206ENST00000593074 OR4C3Q8NH37 302 aa18.11■□□□□ 0.49
CLIP3-206ENST00000593074 WDFY2Q96P53 400 aa18.11■□□□□ 0.49
CLIP3-206ENST00000593074 PHOX2BQ99453 314 aa18.11■□□□□ 0.49
CLIP3-206ENST00000593074 ELF4Q99607 663 aaPredicted RBP18.11■□□□□ 0.49
CLIP3-206ENST00000593074 SLC30A2Q9BRI3 323 aa18.11■□□□□ 0.49
CLIP3-206ENST00000593074 HCAR1Q9BXC0 346 aa18.11■□□□□ 0.49
CLIP3-206ENST00000593074 SP140LQ9H930 580 aa18.11■□□□□ 0.49
CLIP3-206ENST00000593074 MED20Q9H944 212 aa18.11■□□□□ 0.49
CLIP3-206ENST00000593074 POLE4Q9NR33 117 aa18.11■□□□□ 0.49
CLIP3-206ENST00000593074 GMEB2Q9UKD1 530 aa18.11■□□□□ 0.49
CLIP3-206ENST00000593074 SLC35A3Q9Y2D2 325 aa18.11■□□□□ 0.49
CLIP3-206ENST00000593074 MMACHCQ9Y4U1 282 aa18.11■□□□□ 0.49
CLIP3-206ENST00000593074 MAU2Q9Y6X3 613 aa18.11■□□□□ 0.49
CLIP3-206ENST00000593074 SERINC4A6NH21 518 aa18.11■□□□□ 0.49
CLIP3-206ENST00000593074 TMEM150CB9EJG8 249 aa18.11■□□□□ 0.49
CLIP3-206ENST00000593074 LOC110117498-PIK3R3F6TDL0 507 aa18.11■□□□□ 0.49
CLIP3-206ENST00000593074 PAICSP22234 425 aaKnown RBP18.11■□□□□ 0.49
CLIP3-206ENST00000593074 TNFSF8P32971 234 aa18.11■□□□□ 0.49
CLIP3-206ENST00000593074 COPZ1P61923 177 aa18.11■□□□□ 0.49
CLIP3-206ENST00000593074 GPLD1P80108 840 aa18.11■□□□□ 0.49
CLIP3-206ENST00000593074 FABP5Q01469 135 aa18.11■□□□□ 0.49
CLIP3-206ENST00000593074 ZNF791Q3KP31 576 aaPredicted RBP18.11■□□□□ 0.49
CLIP3-206ENST00000593074 ZNF362Q5T0B9 420 aaPredicted RBP18.11■□□□□ 0.49
CLIP3-206ENST00000593074 LYSMD4Q5XG99 296 aa18.11■□□□□ 0.49
CLIP3-206ENST00000593074 ZNF322Q6U7Q0 402 aaPredicted RBP18.11■□□□□ 0.49
CLIP3-206ENST00000593074 TTLL10Q6ZVT0 673 aa18.11■□□□□ 0.49
CLIP3-206ENST00000593074 OR51A7Q8NH64 312 aa18.11■□□□□ 0.49
CLIP3-206ENST00000593074 OTULINQ96BN8 352 aa18.11■□□□□ 0.49
CLIP3-206ENST00000593074 C1GALT1C1Q96EU7 318 aa18.11■□□□□ 0.49
CLIP3-206ENST00000593074 MVB12AQ96EY5 273 aa18.11■□□□□ 0.49
CLIP3-206ENST00000593074 TM9SF2Q99805 663 aa18.11■□□□□ 0.49
CLIP3-206ENST00000593074 MCCC2Q9HCC0 563 aa18.11■□□□□ 0.49
CLIP3-206ENST00000593074 TOR4AQ9NXH8 423 aa18.11■□□□□ 0.49
CLIP3-206ENST00000593074 CAB39Q9Y376 341 aaPredicted RBP18.11■□□□□ 0.49
CLIP3-206ENST00000593074 USP34Q70CQ2 3546 aa18.1■□□□□ 0.49
CLIP3-206ENST00000593074 CCDC182A6NF36 153 aa18.1■□□□□ 0.49
CLIP3-206ENST00000593074 C17orf105B2RV13 164 aa18.1■□□□□ 0.49
CLIP3-206ENST00000593074 LRRTM2O43300 516 aa18.1■□□□□ 0.49
CLIP3-206ENST00000593074 CSTAP01040 98 aa18.1■□□□□ 0.49
CLIP3-206ENST00000593074 MYF5P13349 255 aa18.1■□□□□ 0.49
CLIP3-206ENST00000593074 ALAS2P22557 587 aa18.1■□□□□ 0.49
CLIP3-206ENST00000593074 DHPSP49366 369 aaPredicted RBP18.1■□□□□ 0.49
CLIP3-206ENST00000593074 BDH1Q02338 343 aa18.1■□□□□ 0.49
CLIP3-206ENST00000593074 RUNX1T1Q06455 604 aa18.1■□□□□ 0.49
CLIP3-206ENST00000593074 CDC20Q12834 499 aa18.1■□□□□ 0.49
CLIP3-206ENST00000593074 CRTC2Q53ET0 693 aaPredicted RBP18.1■□□□□ 0.49
CLIP3-206ENST00000593074 CADM2Q8N3J6 435 aa18.1■□□□□ 0.49
CLIP3-206ENST00000593074 ACBD7Q8N6N7 88 aa18.1■□□□□ 0.49
CLIP3-206ENST00000593074 SLC37A3Q8NCC5 494 aa18.1■□□□□ 0.49
CLIP3-206ENST00000593074 PTPMT1Q8WUK0 201 aaPredicted RBP18.1■□□□□ 0.49
CLIP3-206ENST00000593074 SPRYD4Q8WW59 207 aaPredicted RBP18.1■□□□□ 0.49
CLIP3-206ENST00000593074 OIT3Q8WWZ8 545 aa18.1■□□□□ 0.49
CLIP3-206ENST00000593074 PTP4A1Q93096 173 aa18.1■□□□□ 0.49
CLIP3-206ENST00000593074 CEP19Q96LK0 163 aa18.1■□□□□ 0.49
CLIP3-206ENST00000593074 OR1F2PQ96R84 312 aa18.1■□□□□ 0.49
CLIP3-206ENST00000593074 COQ7Q99807 217 aa18.1■□□□□ 0.49
CLIP3-206ENST00000593074 YIPF2Q9BWQ6 316 aa18.1■□□□□ 0.49
CLIP3-206ENST00000593074 CCDC163A0A0D9SF12 145 aa18.1■□□□□ 0.49
CLIP3-206ENST00000593074 TRDV1A0A1B0GX56 115 aa18.1■□□□□ 0.49
CLIP3-206ENST00000593074 SLC22A31A6NKX4 558 aa18.1■□□□□ 0.49
CLIP3-206ENST00000593074 RIIAD1A6NNX1 92 aa18.1■□□□□ 0.49
CLIP3-206ENST00000593074 PRR23D1E9PI22 279 aaPredicted RBP18.1■□□□□ 0.49
CLIP3-206ENST00000593074 PRR23D2P0DMB1 279 aaPredicted RBP18.1■□□□□ 0.49
CLIP3-206ENST00000593074 SLC2A5P22732 501 aa18.1■□□□□ 0.49
CLIP3-206ENST00000593074 GTF2E2P29084 291 aaKnown RBP18.1■□□□□ 0.49
CLIP3-206ENST00000593074 HOXA6P31267 233 aa18.1■□□□□ 0.49
CLIP3-206ENST00000593074 PSPHP78330 225 aa18.1■□□□□ 0.49
CLIP3-206ENST00000593074 CRYZQ08257 329 aaKnown RBP18.1■□□□□ 0.49
CLIP3-206ENST00000593074 SHBQ15464 509 aa18.1■□□□□ 0.49
CLIP3-206ENST00000593074 NDUFAF6Q330K2 333 aa18.1■□□□□ 0.49
CLIP3-206ENST00000593074 ARIH2OSQ8N7S6 290 aa18.1■□□□□ 0.49
CLIP3-206ENST00000593074 ZFP41Q8N8Y5 198 aa18.1■□□□□ 0.49
CLIP3-206ENST00000593074 GALNT6Q8NCL4 622 aa18.1■□□□□ 0.49
CLIP3-206ENST00000593074 FAM71CQ8NEG0 241 aa18.1■□□□□ 0.49
CLIP3-206ENST00000593074 ASB15Q8WXK1 588 aa18.1■□□□□ 0.49
CLIP3-206ENST00000593074 SDHCQ99643 169 aaPredicted RBP18.1■□□□□ 0.49
CLIP3-206ENST00000593074 NEURL2Q9BR09 285 aa18.1■□□□□ 0.49
CLIP3-206ENST00000593074 CCDC32Q9BV29 185 aa18.1■□□□□ 0.49
CLIP3-206ENST00000593074 RPS6KB2Q9UBS0 482 aa18.1■□□□□ 0.49
CLIP3-206ENST00000593074 MUTYHQ9UIF7 546 aa18.1■□□□□ 0.49
CLIP3-206ENST00000593074 TRAPPC4Q9Y296 219 aa18.1■□□□□ 0.49
CLIP3-206ENST00000593074 IGKV3D-11A0A0A0MRZ8 115 aa18.09■□□□□ 0.49
CLIP3-206ENST00000593074 ZC3H12DA2A288 527 aaKnown RBP18.09■□□□□ 0.49
CLIP3-206ENST00000593074 SLC35F4A4IF30 521 aa18.09■□□□□ 0.49
CLIP3-206ENST00000593074 ATXN8OSP0DMR3 200 aa18.09■□□□□ 0.49
CLIP3-206ENST00000593074 GAAP10253 952 aa18.09■□□□□ 0.49
CLIP3-206ENST00000593074 PEPDP12955 493 aa18.09■□□□□ 0.49
CLIP3-206ENST00000593074 SLC6A6P31641 620 aa18.09■□□□□ 0.49
CLIP3-206ENST00000593074 SLC9A3P48764 834 aa18.09■□□□□ 0.49
CLIP3-206ENST00000593074 GPR143P51810 404 aa18.09■□□□□ 0.49
CLIP3-206ENST00000593074 SLC37A1P57057 533 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms