RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 H7C1Q1 480 aa11.8□□□□□ -0.52
APOC1-209ENST00000592885 CYTIPO60759 359 aa11.8□□□□□ -0.52
APOC1-209ENST00000592885 UGT2B17O75795 530 aa11.8□□□□□ -0.52
APOC1-209ENST00000592885 CNOT4O95628 575 aaKnown RBP11.8□□□□□ -0.52
APOC1-209ENST00000592885 CSTAP01040 98 aa11.8□□□□□ -0.52
APOC1-209ENST00000592885 DHRS4L1P0CG22 281 aa11.8□□□□□ -0.52
APOC1-209ENST00000592885 ENPP1P22413 925 aa11.8□□□□□ -0.52
APOC1-209ENST00000592885 UQCRC2P22695 453 aa11.8□□□□□ -0.52
APOC1-209ENST00000592885 FKBP2P26885 142 aaKnown RBP11.8□□□□□ -0.52
APOC1-209ENST00000592885 OR3A2P47893 321 aa11.8□□□□□ -0.52
APOC1-209ENST00000592885 RPL14P50914 215 aaKnown RBP11.8□□□□□ -0.52
APOC1-209ENST00000592885 RPS26P62854 115 aaKnown RBP11.8□□□□□ -0.52
APOC1-209ENST00000592885 CSNK2A1P68400 391 aaPredicted RBP11.8□□□□□ -0.52
APOC1-209ENST00000592885 TXNL4AP83876 142 aaKnown RBP11.8□□□□□ -0.52
APOC1-209ENST00000592885 ITGADQ13349 1161 aa11.8□□□□□ -0.52
APOC1-209ENST00000592885 GPR68Q15743 365 aa11.8□□□□□ -0.52
APOC1-209ENST00000592885 NDUFAF6Q330K2 333 aa11.8□□□□□ -0.52
APOC1-209ENST00000592885 Q6ZT83 130 aa11.8□□□□□ -0.52
APOC1-209ENST00000592885 NUFIP2Q7Z417 695 aaKnown RBP11.8□□□□□ -0.52
APOC1-209ENST00000592885 FAM71CQ8NEG0 241 aa11.8□□□□□ -0.52
APOC1-209ENST00000592885 RFWD2Q8NHY2 731 aa11.8□□□□□ -0.52
APOC1-209ENST00000592885 NUDT8Q8WV74 236 aa11.8□□□□□ -0.52
APOC1-209ENST00000592885 SMR3AQ99954 134 aa11.8□□□□□ -0.52
APOC1-209ENST00000592885 OR51I1Q9H343 314 aa11.8□□□□□ -0.52
APOC1-209ENST00000592885 ESRP2Q9H6T0 727 aaKnown RBP11.8□□□□□ -0.52
APOC1-209ENST00000592885 ACER3Q9NUN7 267 aa11.8□□□□□ -0.52
APOC1-209ENST00000592885 RNF115Q9Y4L5 304 aa11.8□□□□□ -0.52
APOC1-209ENST00000592885 NIPBLQ6KC79 2804 aaeCLIP11.8□□□□□ -0.52
APOC1-209ENST00000592885 ANKRD28O15084 1053 aa11.79□□□□□ -0.52
APOC1-209ENST00000592885 SMAD9O15198 467 aaKnown RBP11.79□□□□□ -0.52
APOC1-209ENST00000592885 DNPH1O43598 174 aa11.79□□□□□ -0.52
APOC1-209ENST00000592885 ITM2AO43736 263 aa11.79□□□□□ -0.52
APOC1-209ENST00000592885 SCN2BO60939 215 aa11.79□□□□□ -0.52
APOC1-209ENST00000592885 APOBEC1P41238 236 aaKnown RBP11.79□□□□□ -0.52
APOC1-209ENST00000592885 KHKP50053 298 aa11.79□□□□□ -0.52
APOC1-209ENST00000592885 RNF144AP50876 292 aaPredicted RBP11.79□□□□□ -0.52
APOC1-209ENST00000592885 TIGD2Q4W5G0 525 aa11.79□□□□□ -0.52
APOC1-209ENST00000592885 SYT14P1Q58G82 188 aa11.79□□□□□ -0.52
APOC1-209ENST00000592885 NCMAPQ5T1S8 102 aa11.79□□□□□ -0.52
APOC1-209ENST00000592885 SAXO2Q658L1 398 aa11.79□□□□□ -0.52
APOC1-209ENST00000592885 ABLIM2Q6H8Q1 611 aa11.79□□□□□ -0.52
APOC1-209ENST00000592885 CROCCP2Q86T23 111 aa11.79□□□□□ -0.52
APOC1-209ENST00000592885 NEURL3Q96EH8 262 aa11.79□□□□□ -0.52
APOC1-209ENST00000592885 OR5B2Q96R09 309 aa11.79□□□□□ -0.52
APOC1-209ENST00000592885 THUMPD3Q9BV44 507 aaKnown RBP11.79□□□□□ -0.52
APOC1-209ENST00000592885 SAP130Q9H0E3 1048 aa11.79□□□□□ -0.52
APOC1-209ENST00000592885 EXOSC3Q9NQT5 275 aaKnown RBP11.79□□□□□ -0.52
APOC1-209ENST00000592885 KCNE5Q9UJ90 142 aa11.79□□□□□ -0.52
APOC1-209ENST00000592885 WDR45Q9Y484 360 aa11.79□□□□□ -0.52
APOC1-209ENST00000592885 A0A1W2PNR3 127 aa11.78□□□□□ -0.52
APOC1-209ENST00000592885 E9PBE3 544 aa11.78□□□□□ -0.52
APOC1-209ENST00000592885 FCMRO60667 390 aa11.78□□□□□ -0.52
APOC1-209ENST00000592885 H6PDO95479 791 aa11.78□□□□□ -0.52
APOC1-209ENST00000592885 ADAP00813 363 aa11.78□□□□□ -0.52
APOC1-209ENST00000592885 FESP07332 822 aa11.78□□□□□ -0.52
APOC1-209ENST00000592885 CD3EP07766 207 aa11.78□□□□□ -0.52
APOC1-209ENST00000592885 UBTFL6P0CB48 400 aaPredicted RBP11.78□□□□□ -0.52
APOC1-209ENST00000592885 LBPP18428 481 aa11.78□□□□□ -0.52
APOC1-209ENST00000592885 PGM1P36871 562 aa11.78□□□□□ -0.52
APOC1-209ENST00000592885 SLC1A6P48664 564 aa11.78□□□□□ -0.52
APOC1-209ENST00000592885 DIO1P49895 249 aa11.78□□□□□ -0.52
APOC1-209ENST00000592885 ANXA11P50995 505 aaKnown RBP11.78□□□□□ -0.52
APOC1-209ENST00000592885 SESN3P58005 492 aa11.78□□□□□ -0.52
APOC1-209ENST00000592885 RPS4XP62701 263 aaKnown RBP11.78□□□□□ -0.52
APOC1-209ENST00000592885 HPCAP84074 193 aa11.78□□□□□ -0.52
APOC1-209ENST00000592885 LRRC74AQ0VAA2 488 aa11.78□□□□□ -0.52
APOC1-209ENST00000592885 RASGEF1BQ0VAM2 473 aa11.78□□□□□ -0.52
APOC1-209ENST00000592885 MERTKQ12866 999 aa11.78□□□□□ -0.52
APOC1-209ENST00000592885 CASP8Q14790 479 aa11.78□□□□□ -0.52
APOC1-209ENST00000592885 PDK3Q15120 406 aa11.78□□□□□ -0.52
APOC1-209ENST00000592885 TAB1Q15750 504 aa11.78□□□□□ -0.52
APOC1-209ENST00000592885 ETFDHQ16134 617 aa11.78□□□□□ -0.52
APOC1-209ENST00000592885 TYW3Q6IPR3 259 aaKnown RBP11.78□□□□□ -0.52
APOC1-209ENST00000592885 OGFOD2Q6N063 350 aa11.78□□□□□ -0.52
APOC1-209ENST00000592885 TMPPEQ6ZT21 453 aa11.78□□□□□ -0.52
APOC1-209ENST00000592885 BHLHA15Q7RTS1 189 aaPredicted RBP11.78□□□□□ -0.52
APOC1-209ENST00000592885 ZNF619Q8N2I2 560 aa11.78□□□□□ -0.52
APOC1-209ENST00000592885 ATP6V1C2Q8NEY4 427 aa11.78□□□□□ -0.52
APOC1-209ENST00000592885 AKAP1Q92667 903 aaKnown RBP eCLIP11.78□□□□□ -0.521e-13■□□□□ 8.2
APOC1-209ENST00000592885 FBXW5Q969U6 566 aa11.78□□□□□ -0.52
APOC1-209ENST00000592885 ZHX1-C8orf76Q96EF9 292 aa11.78□□□□□ -0.52
APOC1-209ENST00000592885 SORT1Q99523 831 aa11.78□□□□□ -0.52
APOC1-209ENST00000592885 MEAF6Q9HAF1 191 aa11.78□□□□□ -0.52
APOC1-209ENST00000592885 EMC3Q9P0I2 261 aa11.78□□□□□ -0.52
APOC1-209ENST00000592885 BTNL2Q9UIR0 455 aa11.78□□□□□ -0.52
APOC1-209ENST00000592885 ING1Q9UK53 422 aaPredicted RBP11.78□□□□□ -0.52
APOC1-209ENST00000592885 MKLN1Q9UL63 735 aa11.78□□□□□ -0.52
APOC1-209ENST00000592885 FREM1Q5H8C1 2179 aa11.77□□□□□ -0.53
APOC1-209ENST00000592885 IGKV3D-15A0A087WSY6 115 aa11.77□□□□□ -0.53
APOC1-209ENST00000592885 IGHV3-15A0A0B4J1V0 119 aa11.77□□□□□ -0.53
APOC1-209ENST00000592885 CENPVL1A0A0U1RR11 272 aa11.77□□□□□ -0.53
APOC1-209ENST00000592885 WDR91A4D1P6 747 aa11.77□□□□□ -0.53
APOC1-209ENST00000592885 ZNF814B7Z6K7 855 aa11.77□□□□□ -0.53
APOC1-209ENST00000592885 SULT2B1O00204 365 aa11.77□□□□□ -0.53
APOC1-209ENST00000592885 CYP7B1O75881 506 aa11.77□□□□□ -0.53
APOC1-209ENST00000592885 PMS2P2O95744 297 aa11.77□□□□□ -0.53
APOC1-209ENST00000592885 LY6G6DO95868 133 aa11.77□□□□□ -0.53
APOC1-209ENST00000592885 PLAUP00749 431 aa11.77□□□□□ -0.53
APOC1-209ENST00000592885 OR12D1P0DN82 309 aa11.77□□□□□ -0.53
APOC1-209ENST00000592885 COX5AP20674 150 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms