RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 HIVEP2P31629 2446 aa16.74■□□□□ 0.27
CCDC43-205ENST00000592333 PRSS51A0A1B0GVH4 220 aa16.74■□□□□ 0.27
CCDC43-205ENST00000592333 ZNF814B7Z6K7 855 aa16.74■□□□□ 0.27
CCDC43-205ENST00000592333 OVOL3O00110 214 aa16.74■□□□□ 0.27
CCDC43-205ENST00000592333 ANKRD28O15084 1053 aa16.74■□□□□ 0.27
CCDC43-205ENST00000592333 DNPH1O43598 174 aa16.74■□□□□ 0.27
CCDC43-205ENST00000592333 UGT2B17O75795 530 aa16.74■□□□□ 0.27
CCDC43-205ENST00000592333 PLAUP00749 431 aa16.74■□□□□ 0.27
CCDC43-205ENST00000592333 ADAP00813 363 aa16.74■□□□□ 0.27
CCDC43-205ENST00000592333 CSTAP01040 98 aa16.74■□□□□ 0.27
CCDC43-205ENST00000592333 MYZAPP0CAP1 466 aa16.74■□□□□ 0.27
CCDC43-205ENST00000592333 APOBEC1P41238 236 aaKnown RBP16.74■□□□□ 0.27
CCDC43-205ENST00000592333 CLK1P49759 484 aaKnown RBP16.74■□□□□ 0.27
CCDC43-205ENST00000592333 ATP5J2P56134 94 aa16.74■□□□□ 0.27
CCDC43-205ENST00000592333 VSNL1P62760 191 aa16.74■□□□□ 0.27
CCDC43-205ENST00000592333 TXNL4AP83876 142 aaKnown RBP16.74■□□□□ 0.27
CCDC43-205ENST00000592333 TAB1Q15750 504 aa16.74■□□□□ 0.27
CCDC43-205ENST00000592333 PGS1Q32NB8 556 aa16.74■□□□□ 0.27
CCDC43-205ENST00000592333 TIGD2Q4W5G0 525 aa16.74■□□□□ 0.27
CCDC43-205ENST00000592333 WDR93Q6P2C0 686 aa16.74■□□□□ 0.27
CCDC43-205ENST00000592333 OR5AK3PQ8NH89 298 aa16.74■□□□□ 0.27
CCDC43-205ENST00000592333 PIWIL2Q8TC59 973 aaKnown RBP16.74■□□□□ 0.27
CCDC43-205ENST00000592333 AENQ8WTP8 325 aaKnown RBP16.74■□□□□ 0.27
CCDC43-205ENST00000592333 TESCQ96BS2 214 aa16.74■□□□□ 0.27
CCDC43-205ENST00000592333 SLC35G5Q96KT7 338 aa16.74■□□□□ 0.27
CCDC43-205ENST00000592333 THUMPD3Q9BV44 507 aaKnown RBP16.74■□□□□ 0.27
CCDC43-205ENST00000592333 SAP130Q9H0E3 1048 aa16.74■□□□□ 0.27
CCDC43-205ENST00000592333 ACER3Q9NUN7 267 aa16.74■□□□□ 0.27
CCDC43-205ENST00000592333 ING1Q9UK53 422 aaPredicted RBP16.74■□□□□ 0.27
CCDC43-205ENST00000592333 NUP214P35658 2090 aaPredicted RBP16.74■□□□□ 0.27
CCDC43-205ENST00000592333 TRIM64A6NGJ6 449 aa16.73■□□□□ 0.27
CCDC43-205ENST00000592333 TRIM64BA6NI03 449 aa16.73■□□□□ 0.27
CCDC43-205ENST00000592333 FCMRO60667 390 aa16.73■□□□□ 0.27
CCDC43-205ENST00000592333 SCN2BO60939 215 aa16.73■□□□□ 0.27
CCDC43-205ENST00000592333 SERPINE1P05121 402 aa16.73■□□□□ 0.27
CCDC43-205ENST00000592333 DANCRP0C864 163 aa16.73■□□□□ 0.27
CCDC43-205ENST00000592333 UQCRC2P22695 453 aa16.73■□□□□ 0.27
CCDC43-205ENST00000592333 SOAT1P35610 550 aa16.73■□□□□ 0.27
CCDC43-205ENST00000592333 SESN3P58005 492 aa16.73■□□□□ 0.27
CCDC43-205ENST00000592333 RASGEF1BQ0VAM2 473 aa16.73■□□□□ 0.27
CCDC43-205ENST00000592333 GPR68Q15743 365 aa16.73■□□□□ 0.27
CCDC43-205ENST00000592333 ATAD3BQ5T9A4 648 aa16.73■□□□□ 0.27
CCDC43-205ENST00000592333 TMPPEQ6ZT21 453 aa16.73■□□□□ 0.27
CCDC43-205ENST00000592333 C16orf62Q7Z3J2 963 aa16.73■□□□□ 0.27
CCDC43-205ENST00000592333 MREGQ8N565 214 aa16.73■□□□□ 0.27
CCDC43-205ENST00000592333 FAM71CQ8NEG0 241 aa16.73■□□□□ 0.27
CCDC43-205ENST00000592333 LILRB1Q8NHL6 650 aaPredicted RBP16.73■□□□□ 0.27
CCDC43-205ENST00000592333 GTPBP3Q969Y2 492 aaKnown RBP16.73■□□□□ 0.27
CCDC43-205ENST00000592333 KCNE5Q9UJ90 142 aa16.73■□□□□ 0.27
CCDC43-205ENST00000592333 LAMP3Q9UQV4 416 aa16.73■□□□□ 0.27
CCDC43-205ENST00000592333 RAP2CQ9Y3L5 183 aa16.73■□□□□ 0.27
CCDC43-205ENST00000592333 IGKV3D-15A0A087WSY6 115 aa16.72■□□□□ 0.27
CCDC43-205ENST00000592333 GOLGA8QA0A0J9YX86 632 aa16.72■□□□□ 0.27
CCDC43-205ENST00000592333 RNF103-CHMP3A0A140T963 221 aa16.72■□□□□ 0.27
CCDC43-205ENST00000592333 A0A1W2PNR3 127 aa16.72■□□□□ 0.27
CCDC43-205ENST00000592333 GOLGA8OA6NCC3 632 aa16.72■□□□□ 0.27
CCDC43-205ENST00000592333 GOLGA8NF8WBI6 632 aa16.72■□□□□ 0.27
CCDC43-205ENST00000592333 SMAD9O15198 467 aaKnown RBP16.72■□□□□ 0.27
CCDC43-205ENST00000592333 TM9SF1O15321 606 aa16.72■□□□□ 0.27
CCDC43-205ENST00000592333 KIAA0513O60268 411 aa16.72■□□□□ 0.27
CCDC43-205ENST00000592333 DIO1P49895 249 aa16.72■□□□□ 0.27
CCDC43-205ENST00000592333 CCR4P51679 360 aa16.72■□□□□ 0.27
CCDC43-205ENST00000592333 MAP2K6P52564 334 aa16.72■□□□□ 0.27
CCDC43-205ENST00000592333 CLNS1AP54105 237 aaKnown RBP16.72■□□□□ 0.27
CCDC43-205ENST00000592333 ABCE1P61221 599 aaKnown RBP16.72■□□□□ 0.27
CCDC43-205ENST00000592333 PPP2R2BQ00005 443 aa16.72■□□□□ 0.27
CCDC43-205ENST00000592333 NDUFAF6Q330K2 333 aa16.72■□□□□ 0.27
CCDC43-205ENST00000592333 ZNF672Q499Z4 452 aaPredicted RBP16.72■□□□□ 0.27
CCDC43-205ENST00000592333 SYT14P1Q58G82 188 aa16.72■□□□□ 0.27
CCDC43-205ENST00000592333 TIMM23BQ5SRD1 257 aa16.72■□□□□ 0.27
CCDC43-205ENST00000592333 C1QTNF12Q5T7M4 302 aa16.72■□□□□ 0.27
CCDC43-205ENST00000592333 OR4F3Q6IEY1 312 aa16.72■□□□□ 0.27
CCDC43-205ENST00000592333 BHLHA15Q7RTS1 189 aaPredicted RBP16.72■□□□□ 0.27
CCDC43-205ENST00000592333 GALNT5Q7Z7M9 940 aa16.72■□□□□ 0.27
CCDC43-205ENST00000592333 MTDHQ86UE4 582 aaKnown RBP16.72■□□□□ 0.27
CCDC43-205ENST00000592333 ATP6V1C2Q8NEY4 427 aa16.72■□□□□ 0.27
CCDC43-205ENST00000592333 RFWD2Q8NHY2 731 aa16.72■□□□□ 0.27
CCDC43-205ENST00000592333 RAB3IL1Q8TBN0 382 aa16.72■□□□□ 0.27
CCDC43-205ENST00000592333 PMM1Q92871 262 aa16.72■□□□□ 0.27
CCDC43-205ENST00000592333 MUCL1Q96DR8 90 aa16.72■□□□□ 0.27
CCDC43-205ENST00000592333 RADILQ96JH8 1075 aa16.72■□□□□ 0.27
CCDC43-205ENST00000592333 DPY30Q9C005 99 aa16.72■□□□□ 0.27
CCDC43-205ENST00000592333 SERHL2Q9H4I8 314 aa16.72■□□□□ 0.27
CCDC43-205ENST00000592333 AKTIPQ9H8T0 292 aa16.72■□□□□ 0.27
CCDC43-205ENST00000592333 EXOSC3Q9NQT5 275 aaKnown RBP16.72■□□□□ 0.27
CCDC43-205ENST00000592333 EMC3Q9P0I2 261 aa16.72■□□□□ 0.27
CCDC43-205ENST00000592333 HAO1Q9UJM8 370 aa16.72■□□□□ 0.27
CCDC43-205ENST00000592333 ZANQ9Y493 2812 aa16.71■□□□□ 0.27
CCDC43-205ENST00000592333 SMAD7O15105 426 aaKnown RBP16.71■□□□□ 0.27
CCDC43-205ENST00000592333 PGM3O95394 542 aa16.71■□□□□ 0.27
CCDC43-205ENST00000592333 PMS2P2O95744 297 aa16.71■□□□□ 0.27
CCDC43-205ENST00000592333 COX5AP20674 150 aa16.71■□□□□ 0.27
CCDC43-205ENST00000592333 IDUAP35475 653 aa16.71■□□□□ 0.27
CCDC43-205ENST00000592333 PGM1P36871 562 aa16.71■□□□□ 0.27
CCDC43-205ENST00000592333 RPL14P50914 215 aaKnown RBP16.71■□□□□ 0.27
CCDC43-205ENST00000592333 LRRC74AQ0VAA2 488 aa16.71■□□□□ 0.27
CCDC43-205ENST00000592333 MERTKQ12866 999 aa16.71■□□□□ 0.27
CCDC43-205ENST00000592333 SEZ6L2Q6UXD5 910 aa16.71■□□□□ 0.27
CCDC43-205ENST00000592333 CLECL1Q8IZS7 167 aa16.71■□□□□ 0.27
CCDC43-205ENST00000592333 OR4A15Q8NGL6 344 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms