RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	FAM205BP	Q63HN1	556 aa		14.22	□□□□□ -0.13
DDX39A-209	ENST00000589318	PWWP2B	Q6NUJ5	590 aa		14.22	□□□□□ -0.13
DDX39A-209	ENST00000589318	FIGNL1	Q6PIW4	674 aa		14.22	□□□□□ -0.13
DDX39A-209	ENST00000589318	AHSA2	Q719I0	299 aa		14.22	□□□□□ -0.13
DDX39A-209	ENST00000589318	ZSCAN1	Q8NBB4	408 aa		14.22	□□□□□ -0.13
DDX39A-209	ENST00000589318	OR4N2	Q8NGD1	307 aa		14.22	□□□□□ -0.13
DDX39A-209	ENST00000589318	C16orf52	Q8NHV5	167 aa		14.22	□□□□□ -0.13
DDX39A-209	ENST00000589318	LRRC20	Q8TCA0	184 aa		14.22	□□□□□ -0.13
DDX39A-209	ENST00000589318	DNAJA4	Q8WW22	397 aa	Predicted RBP	14.22	□□□□□ -0.13
DDX39A-209	ENST00000589318	DEDD2	Q8WXF8	326 aa		14.22	□□□□□ -0.13
DDX39A-209	ENST00000589318	FRMD6	Q96NE9	622 aa		14.22	□□□□□ -0.13
DDX39A-209	ENST00000589318	NIPSNAP1	Q9BPW8	284 aa		14.22	□□□□□ -0.13
DDX39A-209	ENST00000589318	OR10A5	Q9H207	317 aa		14.22	□□□□□ -0.13
DDX39A-209	ENST00000589318	NARFL	Q9H6Q4	476 aa		14.22	□□□□□ -0.13
DDX39A-209	ENST00000589318	MAN2C1	Q9NTJ4	1040 aa		14.22	□□□□□ -0.13
DDX39A-209	ENST00000589318	MRPL39	Q9NYK5	338 aa	Known RBP	14.22	□□□□□ -0.13
DDX39A-209	ENST00000589318	KIF17	Q9P2E2	1029 aa		14.22	□□□□□ -0.13
DDX39A-209	ENST00000589318	CTSF	Q9UBX1	484 aa		14.22	□□□□□ -0.13
DDX39A-209	ENST00000589318	PSORS1C1	Q9UIG5	152 aa		14.22	□□□□□ -0.13
DDX39A-209	ENST00000589318	AUP1	Q9Y679	476 aa		14.22	□□□□□ -0.13
DDX39A-209	ENST00000589318	ARRDC5	A6NEK1	342 aa		14.21	□□□□□ -0.13
DDX39A-209	ENST00000589318	C17orf105	B2RV13	164 aa		14.21	□□□□□ -0.13
DDX39A-209	ENST00000589318	FRS3	O43559	492 aa		14.21	□□□□□ -0.13
DDX39A-209	ENST00000589318	CPNE3	O75131	537 aa	Known RBP	14.21	□□□□□ -0.13
DDX39A-209	ENST00000589318	IGKV1D-16	P01601	117 aa		14.21	□□□□□ -0.13
DDX39A-209	ENST00000589318	CT45A8	P0DMV1	189 aa		14.21	□□□□□ -0.13
DDX39A-209	ENST00000589318	CT45A9	P0DMV2	189 aa		14.21	□□□□□ -0.13
DDX39A-209	ENST00000589318	CBL	P22681	906 aa		14.21	□□□□□ -0.13
DDX39A-209	ENST00000589318	RORA	P35398	523 aa		14.21	□□□□□ -0.13
DDX39A-209	ENST00000589318	GRK6	P43250	576 aa		14.21	□□□□□ -0.13
DDX39A-209	ENST00000589318	EEF1A1	P68104	462 aa	Known RBP	14.21	□□□□□ -0.13
DDX39A-209	ENST00000589318	BAMBI	Q13145	260 aa		14.21	□□□□□ -0.13
DDX39A-209	ENST00000589318	SEC23B	Q15437	767 aa		14.21	□□□□□ -0.13
DDX39A-209	ENST00000589318	MINDY4	Q4G0A6	757 aa		14.21	□□□□□ -0.13
DDX39A-209	ENST00000589318	CT45A2	Q5DJT8	189 aa		14.21	□□□□□ -0.13
DDX39A-209	ENST00000589318	ZNF782	Q6ZMW2	699 aa	Predicted RBP	14.21	□□□□□ -0.13
DDX39A-209	ENST00000589318	ZNF836	Q6ZNA1	936 aa		14.21	□□□□□ -0.13
DDX39A-209	ENST00000589318	ZNF367	Q7RTV3	350 aa		14.21	□□□□□ -0.13
DDX39A-209	ENST00000589318	LAPTM4B	Q86VI4	370 aa		14.21	□□□□□ -0.13
DDX39A-209	ENST00000589318	LHFPL5	Q8TAF8	219 aa		14.21	□□□□□ -0.13
DDX39A-209	ENST00000589318	TMEM80	Q96HE8	168 aa		14.21	□□□□□ -0.13
DDX39A-209	ENST00000589318	GABARAPL3	Q9BY60	117 aa		14.21	□□□□□ -0.13
DDX39A-209	ENST00000589318	VN1R1	Q9GZP7	353 aa		14.21	□□□□□ -0.13
DDX39A-209	ENST00000589318	KCNN2	Q9H2S1	579 aa		14.21	□□□□□ -0.13
DDX39A-209	ENST00000589318	APMAP	Q9HDC9	416 aa		14.21	□□□□□ -0.13
DDX39A-209	ENST00000589318	MKKS	Q9NPJ1	570 aa	Predicted RBP	14.21	□□□□□ -0.13
DDX39A-209	ENST00000589318	OCIAD1	Q9NX40	245 aa		14.21	□□□□□ -0.13
DDX39A-209	ENST00000589318	TEKT2	Q9UIF3	430 aa		14.21	□□□□□ -0.13
DDX39A-209	ENST00000589318	ZNF318	Q5VUA4	2279 aa		14.21	□□□□□ -0.13
DDX39A-209	ENST00000589318	IGLV3-12	A0A075B6K2	115 aa		14.21	□□□□□ -0.14
DDX39A-209	ENST00000589318	NPIPA5	A0A0B4J1W7	369 aa		14.21	□□□□□ -0.14
DDX39A-209	ENST00000589318	NPIPA7	E9PJI5	369 aa		14.21	□□□□□ -0.14
DDX39A-209	ENST00000589318	PEX12	O00623	359 aa		14.21	□□□□□ -0.14
DDX39A-209	ENST00000589318	OR7A10	O76100	309 aa		14.21	□□□□□ -0.14
DDX39A-209	ENST00000589318	SOX30	O94993	753 aa		14.21	□□□□□ -0.14
DDX39A-209	ENST00000589318	CDK1	P06493	297 aa		14.21	□□□□□ -0.14
DDX39A-209	ENST00000589318	H1F0	P07305	194 aa	Known RBP	14.21	□□□□□ -0.14
DDX39A-209	ENST00000589318	THBS1	P07996	1170 aa		14.21	□□□□□ -0.14
DDX39A-209	ENST00000589318	NPIPA8	P0DM63	369 aa		14.21	□□□□□ -0.14
DDX39A-209	ENST00000589318	ANXA8	P13928	327 aa		14.21	□□□□□ -0.14
DDX39A-209	ENST00000589318	MYL9	P24844	172 aa		14.21	□□□□□ -0.14
DDX39A-209	ENST00000589318	TALDO1	P37837	337 aa		14.21	□□□□□ -0.14
DDX39A-209	ENST00000589318	PLAUR	Q03405	335 aa		14.21	□□□□□ -0.14
DDX39A-209	ENST00000589318	ZFP36L1	Q07352	338 aa	Known RBP	14.21	□□□□□ -0.14
DDX39A-209	ENST00000589318	PHF19	Q5T6S3	580 aa		14.21	□□□□□ -0.14
DDX39A-209	ENST00000589318	ZNF385C	Q66K41	422 aa	Predicted RBP	14.21	□□□□□ -0.14
DDX39A-209	ENST00000589318	TMEM151B	Q8IW70	566 aa		14.21	□□□□□ -0.14
DDX39A-209	ENST00000589318	ZNF321P	Q8N8H1	164 aa		14.21	□□□□□ -0.14
DDX39A-209	ENST00000589318	ATOH1	Q92858	354 aa	Predicted RBP	14.21	□□□□□ -0.14
DDX39A-209	ENST00000589318	SENP5	Q96HI0	755 aa	Predicted RBP	14.21	□□□□□ -0.14
DDX39A-209	ENST00000589318	PRRC1	Q96M27	445 aa		14.21	□□□□□ -0.14
DDX39A-209	ENST00000589318	PRR14	Q9BWN1	585 aa		14.21	□□□□□ -0.14
DDX39A-209	ENST00000589318	TGIF2	Q9GZN2	237 aa		14.21	□□□□□ -0.14
DDX39A-209	ENST00000589318	C11orf16	Q9NQ32	467 aa		14.21	□□□□□ -0.14
DDX39A-209	ENST00000589318	POLE3	Q9NRF9	147 aa		14.21	□□□□□ -0.14
DDX39A-209	ENST00000589318	PNO1	Q9NRX1	252 aa	Known RBP	14.21	□□□□□ -0.14
DDX39A-209	ENST00000589318	ING3	Q9NXR8	418 aa		14.21	□□□□□ -0.14
DDX39A-209	ENST00000589318	RARRES3	Q9UL19	164 aa		14.21	□□□□□ -0.14
DDX39A-209	ENST00000589318	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	14.21	□□□□□ -0.14
DDX39A-209	ENST00000589318	HCN4	Q9Y3Q4	1203 aa		14.21	□□□□□ -0.14
DDX39A-209	ENST00000589318	WDFY3	Q8IZQ1	3526 aa		14.2	□□□□□ -0.14
DDX39A-209	ENST00000589318		A0A1W2PRQ8	180 aa		14.2	□□□□□ -0.14
DDX39A-209	ENST00000589318	FAM86C2P	A6NEL3	165 aa		14.2	□□□□□ -0.14
DDX39A-209	ENST00000589318	OR6C70	A6NIJ9	312 aa		14.2	□□□□□ -0.14
DDX39A-209	ENST00000589318	SSX4	O60224	188 aa		14.2	□□□□□ -0.14
DDX39A-209	ENST00000589318	GDF9	O60383	454 aa		14.2	□□□□□ -0.14
DDX39A-209	ENST00000589318	SCRG1	O75711	98 aa		14.2	□□□□□ -0.14
DDX39A-209	ENST00000589318	CCNB2	O95067	398 aa		14.2	□□□□□ -0.14
DDX39A-209	ENST00000589318	IGKV3-11	P04433	115 aa		14.2	□□□□□ -0.14
DDX39A-209	ENST00000589318	GUSB	P08236	651 aa		14.2	□□□□□ -0.14
DDX39A-209	ENST00000589318	CYP4B1	P13584	511 aa		14.2	□□□□□ -0.14
DDX39A-209	ENST00000589318	ACP1	P24666	158 aa		14.2	□□□□□ -0.14
DDX39A-209	ENST00000589318	RGS6	P49758	472 aa		14.2	□□□□□ -0.14
DDX39A-209	ENST00000589318	SLC37A1	P57057	533 aa		14.2	□□□□□ -0.14
DDX39A-209	ENST00000589318	FOXL2	P58012	376 aa		14.2	□□□□□ -0.14
DDX39A-209	ENST00000589318	IL1RL1	Q01638	556 aa		14.2	□□□□□ -0.14
DDX39A-209	ENST00000589318	EFR3A	Q14156	821 aa		14.2	□□□□□ -0.14
DDX39A-209	ENST00000589318	LAIR1	Q6GTX8	287 aa		14.2	□□□□□ -0.14
DDX39A-209	ENST00000589318	GDPGP1	Q6ZNW5	385 aa		14.2	□□□□□ -0.14
DDX39A-209	ENST00000589318	SLC7A13	Q8TCU3	470 aa		14.2	□□□□□ -0.14

Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms