RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 LIMS1P48059 325 aa13.2□□□□□ -0.3
NPC1-207ENST00000588867 TMPRSS3P57727 454 aa13.2□□□□□ -0.3
NPC1-207ENST00000588867 SEC23BQ15437 767 aa13.2□□□□□ -0.3
NPC1-207ENST00000588867 ANKRD34AQ69YU3 496 aa13.2□□□□□ -0.3
NPC1-207ENST00000588867 POMZP3Q6PJE2 187 aa13.2□□□□□ -0.3
NPC1-207ENST00000588867 ARSKQ6UWY0 536 aa13.2□□□□□ -0.3
NPC1-207ENST00000588867 ZNF730Q6ZMV8 503 aa13.2□□□□□ -0.3
NPC1-207ENST00000588867 PLCZ1Q86YW0 608 aa13.2□□□□□ -0.3
NPC1-207ENST00000588867 OR2M3Q8NG83 312 aa13.2□□□□□ -0.3
NPC1-207ENST00000588867 TMEM255BQ8WV15 326 aa13.2□□□□□ -0.3
NPC1-207ENST00000588867 DNAJA4Q8WW22 397 aaPredicted RBP13.2□□□□□ -0.3
NPC1-207ENST00000588867 NRBF2Q96F24 287 aa13.2□□□□□ -0.3
NPC1-207ENST00000588867 PTGES2Q9H7Z7 377 aa13.2□□□□□ -0.3
NPC1-207ENST00000588867 SMURF2Q9HAU4 748 aa13.2□□□□□ -0.3
NPC1-207ENST00000588867 HHATLQ9HCP6 504 aa13.2□□□□□ -0.3
NPC1-207ENST00000588867 DEPPQ9NTK1 212 aa13.2□□□□□ -0.3
NPC1-207ENST00000588867 TAS2R10Q9NYW0 307 aa13.2□□□□□ -0.3
NPC1-207ENST00000588867 VDAC3Q9Y277 283 aa13.2□□□□□ -0.3
NPC1-207ENST00000588867 NCOR2Q9Y618 2525 aa13.19□□□□□ -0.3
NPC1-207ENST00000588867 IGLV3-32A0A0A0MS00 114 aa13.19□□□□□ -0.3
NPC1-207ENST00000588867 TAF4O00268 1085 aa13.19□□□□□ -0.3
NPC1-207ENST00000588867 CDK2AP1O14519 115 aa13.19□□□□□ -0.3
NPC1-207ENST00000588867 EI24O14681 340 aa13.19□□□□□ -0.3
NPC1-207ENST00000588867 CHP2O43745 196 aa13.19□□□□□ -0.3
NPC1-207ENST00000588867 OR10H3O60404 316 aa13.19□□□□□ -0.3
NPC1-207ENST00000588867 CD46P15529 392 aa13.19□□□□□ -0.3
NPC1-207ENST00000588867 TCEA1P23193 301 aaKnown RBP13.19□□□□□ -0.3
NPC1-207ENST00000588867 SLC1A3P43003 542 aa13.19□□□□□ -0.3
NPC1-207ENST00000588867 ZNF41P51814 821 aaPredicted RBP13.19□□□□□ -0.3
NPC1-207ENST00000588867 UCNP55089 124 aa13.19□□□□□ -0.3
NPC1-207ENST00000588867 SUMO3P55854 103 aaPredicted RBP13.19□□□□□ -0.3
NPC1-207ENST00000588867 OR10G2Q8NGC3 310 aa13.19□□□□□ -0.3
NPC1-207ENST00000588867 C3orf49Q96BT1 292 aa13.19□□□□□ -0.3
NPC1-207ENST00000588867 C5orf34Q96MH7 638 aa13.19□□□□□ -0.3
NPC1-207ENST00000588867 PRSS27Q9BQR3 290 aa13.19□□□□□ -0.3
NPC1-207ENST00000588867 RNF32Q9H0A6 362 aa13.19□□□□□ -0.3
NPC1-207ENST00000588867 VCXQ9H320 206 aa13.19□□□□□ -0.3
NPC1-207ENST00000588867 A0A087WUU8 490 aa13.18□□□□□ -0.3
NPC1-207ENST00000588867 SH3PXD2BA1X283 911 aa13.18□□□□□ -0.3
NPC1-207ENST00000588867 FAAHO00519 579 aa13.18□□□□□ -0.3
NPC1-207ENST00000588867 SNPHO15079 494 aa13.18□□□□□ -0.3
NPC1-207ENST00000588867 RASAL1O95294 804 aa13.18□□□□□ -0.3
NPC1-207ENST00000588867 SP1P08047 785 aa13.18□□□□□ -0.3
NPC1-207ENST00000588867 ZNF26P17031 533 aaPredicted RBP13.18□□□□□ -0.3
NPC1-207ENST00000588867 CCNA2P20248 432 aa13.18□□□□□ -0.3
NPC1-207ENST00000588867 MST1P26927 711 aa13.18□□□□□ -0.3
NPC1-207ENST00000588867 TACR3P29371 465 aa13.18□□□□□ -0.3
NPC1-207ENST00000588867 LSM11P83369 360 aaKnown RBP eCLIP13.18□□□□□ -0.3
NPC1-207ENST00000588867 IL1RL1Q01638 556 aa13.18□□□□□ -0.3
NPC1-207ENST00000588867 TIGD3Q6B0B8 471 aa13.18□□□□□ -0.3
NPC1-207ENST00000588867 SLC25A25Q6KCM7 469 aa13.18□□□□□ -0.3
NPC1-207ENST00000588867 PPP4R4Q6NUP7 873 aa13.18□□□□□ -0.3
NPC1-207ENST00000588867 BORAQ6PGQ7 559 aa13.18□□□□□ -0.3
NPC1-207ENST00000588867 WDR88Q6ZMY6 472 aa13.18□□□□□ -0.3
NPC1-207ENST00000588867 ATG16L2Q8NAA4 619 aa13.18□□□□□ -0.3
NPC1-207ENST00000588867 MDS2Q8NDY4 140 aa13.18□□□□□ -0.3
NPC1-207ENST00000588867 OR9Q2Q8NGE9 314 aa13.18□□□□□ -0.3
NPC1-207ENST00000588867 TMEM234Q8WY98 164 aa13.18□□□□□ -0.3
NPC1-207ENST00000588867 ZCCHC14Q8WYQ9 949 aaKnown RBP13.18□□□□□ -0.3
NPC1-207ENST00000588867 TMEM41AQ96HV5 264 aa13.18□□□□□ -0.3
NPC1-207ENST00000588867 FEVQ99581 238 aa13.18□□□□□ -0.3
NPC1-207ENST00000588867 ANKRD19PQ9H560 264 aa13.18□□□□□ -0.3
NPC1-207ENST00000588867 TUBA8Q9NY65 449 aaPredicted RBP13.18□□□□□ -0.3
NPC1-207ENST00000588867 KIF17Q9P2E2 1029 aa13.18□□□□□ -0.3
NPC1-207ENST00000588867 ELOA3DA6NLF2 546 aaPredicted RBP13.18□□□□□ -0.3
NPC1-207ENST00000588867 FAM47E-STBD1D6RA91 191 aa13.18□□□□□ -0.3
NPC1-207ENST00000588867 PEX1O43933 1283 aa13.18□□□□□ -0.3
NPC1-207ENST00000588867 TRIM3O75382 744 aaPredicted RBP13.18□□□□□ -0.3
NPC1-207ENST00000588867 LYPD3O95274 346 aa13.18□□□□□ -0.3
NPC1-207ENST00000588867 POU2F1P14859 743 aa13.18□□□□□ -0.3
NPC1-207ENST00000588867 CXADRP78310 365 aa13.18□□□□□ -0.3
NPC1-207ENST00000588867 GK3PQ14409 553 aa13.18□□□□□ -0.3
NPC1-207ENST00000588867 TOMM20Q15388 145 aa13.18□□□□□ -0.3
NPC1-207ENST00000588867 ELOA3BQ3SY89 546 aa13.18□□□□□ -0.3
NPC1-207ENST00000588867 GALNTL5Q7Z4T8 443 aa13.18□□□□□ -0.3
NPC1-207ENST00000588867 SULF2Q8IWU5 870 aa13.18□□□□□ -0.3
NPC1-207ENST00000588867 FADS6Q8N9I5 356 aa13.18□□□□□ -0.3
NPC1-207ENST00000588867 ELOA3Q8NG57 546 aa13.18□□□□□ -0.3
NPC1-207ENST00000588867 OR4K5Q8NGD3 323 aa13.18□□□□□ -0.3
NPC1-207ENST00000588867 ACOT11Q8WXI4 607 aaPredicted RBP13.18□□□□□ -0.3
NPC1-207ENST00000588867 NTNG2Q96CW9 530 aa13.18□□□□□ -0.3
NPC1-207ENST00000588867 ZNF597Q96LX8 424 aa13.18□□□□□ -0.3
NPC1-207ENST00000588867 SMAD5Q99717 465 aaKnown RBP13.18□□□□□ -0.3
NPC1-207ENST00000588867 FAM173AQ9BQD7 235 aa13.18□□□□□ -0.3
NPC1-207ENST00000588867 FUZQ9BT04 418 aa13.18□□□□□ -0.3
NPC1-207ENST00000588867 MED17Q9NVC6 651 aa13.18□□□□□ -0.3
NPC1-207ENST00000588867 CSAG2Q9Y5P2 127 aa13.18□□□□□ -0.3
NPC1-207ENST00000588867 PINLYPA6NC86 204 aa13.17□□□□□ -0.3
NPC1-207ENST00000588867 KPNA4O00629 521 aaPredicted RBP13.17□□□□□ -0.3
NPC1-207ENST00000588867 CBR3O75828 277 aa13.17□□□□□ -0.3
NPC1-207ENST00000588867 GASTP01350 101 aa13.17□□□□□ -0.3
NPC1-207ENST00000588867 TNFSF10P50591 281 aa13.17□□□□□ -0.3
NPC1-207ENST00000588867 MERTKQ12866 999 aa13.17□□□□□ -0.3
NPC1-207ENST00000588867 DAG1Q14118 895 aa13.17□□□□□ -0.3
NPC1-207ENST00000588867 ZNF766Q5HY98 468 aa13.17□□□□□ -0.3
NPC1-207ENST00000588867 TTC33Q6PID6 262 aaPredicted RBP13.17□□□□□ -0.3
NPC1-207ENST00000588867 IGFL2Q6UWQ7 119 aa13.17□□□□□ -0.3
NPC1-207ENST00000588867 IZUMO2Q6UXV1 221 aa13.17□□□□□ -0.3
NPC1-207ENST00000588867 P3H2Q8IVL5 708 aa13.17□□□□□ -0.3
NPC1-207ENST00000588867 AQP11Q8NBQ7 271 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms