RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 ARGFXA6NJG6 315 aa20.31■□□□□ 0.84
ATG4D-209ENST00000588857 LYPD3O95274 346 aa20.31■□□□□ 0.84
ATG4D-209ENST00000588857 ADAP00813 363 aa20.31■□□□□ 0.84
ATG4D-209ENST00000588857 GAS1P54826 345 aa20.31■□□□□ 0.84
ATG4D-209ENST00000588857 MED21Q13503 144 aa20.31■□□□□ 0.84
ATG4D-209ENST00000588857 COL28A1Q2UY09 1125 aa20.31■□□□□ 0.84
ATG4D-209ENST00000588857 SLC30A6Q6NXT4 461 aa20.31■□□□□ 0.84
ATG4D-209ENST00000588857 PGBD2Q6P3X8 592 aa20.31■□□□□ 0.84
ATG4D-209ENST00000588857 RTL4Q6ZR62 310 aa20.31■□□□□ 0.84
ATG4D-209ENST00000588857 MBOAT2Q6ZWT7 520 aa20.31■□□□□ 0.84
ATG4D-209ENST00000588857 BEST3Q8N1M1 668 aa20.31■□□□□ 0.84
ATG4D-209ENST00000588857 ZNF555Q8NEP9 628 aa20.31■□□□□ 0.84
ATG4D-209ENST00000588857 PIGXQ8TBF5 258 aa20.31■□□□□ 0.84
ATG4D-209ENST00000588857 DCBLD2Q96PD2 775 aa20.31■□□□□ 0.84
ATG4D-209ENST00000588857 WIF1Q9Y5W5 379 aa20.31■□□□□ 0.84
ATG4D-209ENST00000588857 PKD1L2Q7Z442 2459 aa20.31■□□□□ 0.84
ATG4D-209ENST00000588857 C17orf51A8MQB3 221 aa20.3■□□□□ 0.84
ATG4D-209ENST00000588857 ZNF891A8MT65 544 aaPredicted RBP20.3■□□□□ 0.84
ATG4D-209ENST00000588857 ADAM10O14672 748 aa20.3■□□□□ 0.84
ATG4D-209ENST00000588857 DENRO43583 198 aaKnown RBP20.3■□□□□ 0.84
ATG4D-209ENST00000588857 CAPGP40121 348 aa20.3■□□□□ 0.84
ATG4D-209ENST00000588857 CMPK2Q5EBM0 449 aa20.3■□□□□ 0.84
ATG4D-209ENST00000588857 SLC22A10Q63ZE4 541 aa20.3■□□□□ 0.84
ATG4D-209ENST00000588857 OR5M10Q6IEU7 315 aa20.3■□□□□ 0.84
ATG4D-209ENST00000588857 TMEM81Q6P7N7 255 aa20.3■□□□□ 0.84
ATG4D-209ENST00000588857 GPALPP1Q8IXQ4 340 aa20.3■□□□□ 0.84
ATG4D-209ENST00000588857 CYP4Z2PQ8N1L4 340 aa20.3■□□□□ 0.84
ATG4D-209ENST00000588857 TMEM239Q8WW34 195 aa20.3■□□□□ 0.84
ATG4D-209ENST00000588857 KCNE4Q8WWG9 221 aa20.3■□□□□ 0.84
ATG4D-209ENST00000588857 HS6ST2Q96MM7 605 aa20.3■□□□□ 0.84
ATG4D-209ENST00000588857 MBOAT4Q96T53 435 aa20.3■□□□□ 0.84
ATG4D-209ENST00000588857 RIBC2Q9H4K1 309 aa20.3■□□□□ 0.84
ATG4D-209ENST00000588857 CNIH4Q9P003 139 aa20.3■□□□□ 0.84
ATG4D-209ENST00000588857 H0YAE9 185 aa20.29■□□□□ 0.84
ATG4D-209ENST00000588857 RRP8O43159 456 aaKnown RBP20.29■□□□□ 0.84
ATG4D-209ENST00000588857 PTGDSP41222 190 aa20.29■□□□□ 0.84
ATG4D-209ENST00000588857 SLC1A3P43003 542 aa20.29■□□□□ 0.84
ATG4D-209ENST00000588857 HLCSP50747 726 aa20.29■□□□□ 0.84
ATG4D-209ENST00000588857 SUMO3P55854 103 aaPredicted RBP20.29■□□□□ 0.84
ATG4D-209ENST00000588857 KCNAB2Q13303 367 aa20.29■□□□□ 0.84
ATG4D-209ENST00000588857 SLC36A3Q495N2 470 aa20.29■□□□□ 0.84
ATG4D-209ENST00000588857 ZNF468Q5VIY5 522 aaPredicted RBP20.29■□□□□ 0.84
ATG4D-209ENST00000588857 C1orf94Q6P1W5 598 aa20.29■□□□□ 0.84
ATG4D-209ENST00000588857 WDR88Q6ZMY6 472 aa20.29■□□□□ 0.84
ATG4D-209ENST00000588857 NRMQ8IXM6 262 aa20.29■□□□□ 0.84
ATG4D-209ENST00000588857 RNF113BQ8IZP6 322 aaKnown RBP20.29■□□□□ 0.84
ATG4D-209ENST00000588857 GALNT16Q8N428 558 aa20.29■□□□□ 0.84
ATG4D-209ENST00000588857 PAQR8Q8TEZ7 354 aa20.29■□□□□ 0.84
ATG4D-209ENST00000588857 C3orf49Q96BT1 292 aa20.29■□□□□ 0.84
ATG4D-209ENST00000588857 DGCR6LQ9BY27 220 aa20.29■□□□□ 0.84
ATG4D-209ENST00000588857 UCK2Q9BZX2 261 aa20.29■□□□□ 0.84
ATG4D-209ENST00000588857 CPNE5Q9HCH3 593 aa20.29■□□□□ 0.84
ATG4D-209ENST00000588857 ANKRD10Q9NXR5 420 aa20.29■□□□□ 0.84
ATG4D-209ENST00000588857 ENOPH1Q9UHY7 261 aa20.29■□□□□ 0.84
ATG4D-209ENST00000588857 ZFHX4Q86UP3 3567 aa20.29■□□□□ 0.84
ATG4D-209ENST00000588857 NTN1O95631 604 aa20.29■□□□□ 0.84
ATG4D-209ENST00000588857 PNMTP11086 282 aa20.29■□□□□ 0.84
ATG4D-209ENST00000588857 WT1P19544 449 aaPredicted RBP20.29■□□□□ 0.84
ATG4D-209ENST00000588857 MSX1P28360 303 aa20.29■□□□□ 0.84
ATG4D-209ENST00000588857 CASRP41180 1078 aa20.29■□□□□ 0.84
ATG4D-209ENST00000588857 RBM34P42696 430 aaKnown RBP20.29■□□□□ 0.84
ATG4D-209ENST00000588857 CYB561P49447 251 aa20.29■□□□□ 0.84
ATG4D-209ENST00000588857 CRTC2Q53ET0 693 aaPredicted RBP20.29■□□□□ 0.84
ATG4D-209ENST00000588857 PRAMEF20Q5VT98 475 aa20.29■□□□□ 0.84
ATG4D-209ENST00000588857 TTC23Q5W5X9 447 aa20.29■□□□□ 0.84
ATG4D-209ENST00000588857 LRRC69Q6ZNQ3 347 aa20.29■□□□□ 0.84
ATG4D-209ENST00000588857 ZER1Q7Z7L7 766 aa20.29■□□□□ 0.84
ATG4D-209ENST00000588857 ZNF248Q8NDW4 579 aa20.29■□□□□ 0.84
ATG4D-209ENST00000588857 GNPDA2Q8TDQ7 276 aa20.29■□□□□ 0.84
ATG4D-209ENST00000588857 GPR119Q8TDV5 335 aa20.29■□□□□ 0.84
ATG4D-209ENST00000588857 FAM118AQ9NWS6 357 aa20.29■□□□□ 0.84
ATG4D-209ENST00000588857 POLHQ9Y253 713 aa20.29■□□□□ 0.84
ATG4D-209ENST00000588857 MED31Q9Y3C7 131 aa20.29■□□□□ 0.84
ATG4D-209ENST00000588857 ANKUB1A6NFN9 424 aa20.28■□□□□ 0.84
ATG4D-209ENST00000588857 ELOA3DA6NLF2 546 aaPredicted RBP20.28■□□□□ 0.84
ATG4D-209ENST00000588857 CCL3P10147 92 aa20.28■□□□□ 0.84
ATG4D-209ENST00000588857 GP1BBP13224 206 aa20.28■□□□□ 0.84
ATG4D-209ENST00000588857 ADARB1P78563 741 aaKnown RBP20.28■□□□□ 0.84
ATG4D-209ENST00000588857 LSM11P83369 360 aaKnown RBP eCLIP20.28■□□□□ 0.842e-15■□□□□ 8.5
ATG4D-209ENST00000588857 OC90Q02509 493 aaPredicted RBP20.28■□□□□ 0.84
ATG4D-209ENST00000588857 ELOA3BQ3SY89 546 aa20.28■□□□□ 0.84
ATG4D-209ENST00000588857 TTC33Q6PID6 262 aaPredicted RBP20.28■□□□□ 0.84
ATG4D-209ENST00000588857 C19orf48Q6RUI8 117 aa20.28■□□□□ 0.84
ATG4D-209ENST00000588857 PRICKLE2Q7Z3G6 844 aa20.28■□□□□ 0.84
ATG4D-209ENST00000588857 PARP8Q8N3A8 854 aa20.28■□□□□ 0.84
ATG4D-209ENST00000588857 ELOA3Q8NG57 546 aa20.28■□□□□ 0.84
ATG4D-209ENST00000588857 CNBD2Q96M20 576 aa20.28■□□□□ 0.84
ATG4D-209ENST00000588857 CCNL2Q96S94 520 aaPredicted RBP20.28■□□□□ 0.84
ATG4D-209ENST00000588857 ANGPTL4Q9BY76 406 aa20.28■□□□□ 0.84
ATG4D-209ENST00000588857 SH2D2AQ9NP31 389 aa20.28■□□□□ 0.84
ATG4D-209ENST00000588857 MED11Q9P086 117 aa20.28■□□□□ 0.84
ATG4D-209ENST00000588857 KLK10O43240 276 aa20.27■□□□□ 0.84
ATG4D-209ENST00000588857 GSTM3P21266 225 aa20.27■□□□□ 0.84
ATG4D-209ENST00000588857 CDC20Q12834 499 aa20.27■□□□□ 0.84
ATG4D-209ENST00000588857 COX10Q12887 443 aa20.27■□□□□ 0.84
ATG4D-209ENST00000588857 NPRL3Q12980 569 aa20.27■□□□□ 0.84
ATG4D-209ENST00000588857 QPRTQ15274 297 aa20.27■□□□□ 0.84
ATG4D-209ENST00000588857 KLHL17Q6TDP4 642 aa20.27■□□□□ 0.84
ATG4D-209ENST00000588857 LINC00114Q6XXX2 140 aa20.27■□□□□ 0.84
ATG4D-209ENST00000588857 CDK20Q8IZL9 346 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms