RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 RMND5AQ9H871 391 aa12.91□□□□□ -0.34
DDX39A-208ENST00000588692 COQ10BQ9H8M1 238 aa12.91□□□□□ -0.34
DDX39A-208ENST00000588692 EXOSC3Q9NQT5 275 aaKnown RBP12.91□□□□□ -0.34
DDX39A-208ENST00000588692 SERINC1Q9NRX5 453 aa12.91□□□□□ -0.34
DDX39A-208ENST00000588692 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.91□□□□□ -0.34
DDX39A-208ENST00000588692 CLEC4AQ9UMR7 237 aa12.91□□□□□ -0.34
DDX39A-208ENST00000588692 HIVEP1P15822 2718 aa12.91□□□□□ -0.34
DDX39A-208ENST00000588692 TEP1Q99973 2627 aaKnown RBP12.91□□□□□ -0.34
DDX39A-208ENST00000588692 TGDSO95455 350 aa12.91□□□□□ -0.34
DDX39A-208ENST00000588692 ZCCHC18P0CG32 403 aa12.91□□□□□ -0.34
DDX39A-208ENST00000588692 AGTR1P30556 359 aa12.91□□□□□ -0.34
DDX39A-208ENST00000588692 RAC3P60763 192 aa12.91□□□□□ -0.34
DDX39A-208ENST00000588692 CHRNEQ04844 493 aa12.91□□□□□ -0.34
DDX39A-208ENST00000588692 TIGD2Q4W5G0 525 aa12.91□□□□□ -0.34
DDX39A-208ENST00000588692 EPGNQ6UW88 154 aa12.91□□□□□ -0.34
DDX39A-208ENST00000588692 LRRC74BQ6ZQY2 392 aa12.91□□□□□ -0.34
DDX39A-208ENST00000588692 BEND4Q6ZU67 534 aa12.91□□□□□ -0.34
DDX39A-208ENST00000588692 MIER2Q8N344 545 aa12.91□□□□□ -0.34
DDX39A-208ENST00000588692 SLC43A2Q8N370 569 aa12.91□□□□□ -0.34
DDX39A-208ENST00000588692 GOLGA6L1Q8N7Z2 621 aa12.91□□□□□ -0.34
DDX39A-208ENST00000588692 SLC25A43Q8WUT9 341 aaPredicted RBP12.91□□□□□ -0.34
DDX39A-208ENST00000588692 ZNF524Q96C55 264 aa12.91□□□□□ -0.34
DDX39A-208ENST00000588692 MARK4Q96L34 752 aa12.91□□□□□ -0.34
DDX39A-208ENST00000588692 TACO1Q9BSH4 297 aaKnown RBP12.91□□□□□ -0.34
DDX39A-208ENST00000588692 SRXN1Q9BYN0 137 aa12.91□□□□□ -0.34
DDX39A-208ENST00000588692 CXXC4Q9H2H0 198 aa12.91□□□□□ -0.34
DDX39A-208ENST00000588692 KLHL28Q9NXS3 571 aa12.91□□□□□ -0.34
DDX39A-208ENST00000588692 KLHL13Q9P2N7 655 aa12.91□□□□□ -0.34
DDX39A-208ENST00000588692 SPIN1Q9Y657 262 aaPredicted RBP12.91□□□□□ -0.34
DDX39A-208ENST00000588692 PRAMEF27A3QJZ7 478 aa12.9□□□□□ -0.34
DDX39A-208ENST00000588692 POLR3GO15318 223 aaPredicted RBP12.9□□□□□ -0.34
DDX39A-208ENST00000588692 GSNP06396 782 aa12.9□□□□□ -0.34
DDX39A-208ENST00000588692 PPP3CBP16298 524 aa12.9□□□□□ -0.34
DDX39A-208ENST00000588692 MRPL19P49406 292 aaKnown RBP12.9□□□□□ -0.34
DDX39A-208ENST00000588692 POLR2JP52435 117 aaKnown RBP12.9□□□□□ -0.34
DDX39A-208ENST00000588692 SESN3P58005 492 aa12.9□□□□□ -0.34
DDX39A-208ENST00000588692 KCNJ10P78508 379 aa12.9□□□□□ -0.34
DDX39A-208ENST00000588692 GNA13Q14344 377 aa12.9□□□□□ -0.34
DDX39A-208ENST00000588692 SYPL1Q16563 259 aa12.9□□□□□ -0.34
DDX39A-208ENST00000588692 TMEM201Q5SNT2 666 aa12.9□□□□□ -0.34
DDX39A-208ENST00000588692 FCRLAQ7L513 359 aa12.9□□□□□ -0.34
DDX39A-208ENST00000588692 ATP6V1C2Q8NEY4 427 aa12.9□□□□□ -0.34
DDX39A-208ENST00000588692 ABHD3Q8WU67 409 aa12.9□□□□□ -0.34
DDX39A-208ENST00000588692 ROBO4Q8WZ75 1007 aa12.9□□□□□ -0.34
DDX39A-208ENST00000588692 ITCHQ96J02 903 aa12.9□□□□□ -0.34
DDX39A-208ENST00000588692 WFIKKN1Q96NZ8 548 aa12.9□□□□□ -0.34
DDX39A-208ENST00000588692 SLC38A1Q9H2H9 487 aa12.9□□□□□ -0.34
DDX39A-208ENST00000588692 LIME1Q9H400 295 aa12.9□□□□□ -0.34
DDX39A-208ENST00000588692 PLEKHF2Q9H8W4 249 aa12.9□□□□□ -0.34
DDX39A-208ENST00000588692 CCM2LQ9NUG4 571 aaPredicted RBP12.9□□□□□ -0.34
DDX39A-208ENST00000588692 ACER3Q9NUN7 267 aa12.9□□□□□ -0.34
DDX39A-208ENST00000588692 ARGLU1Q9NWB6 273 aaPredicted RBP12.9□□□□□ -0.34
DDX39A-208ENST00000588692 FAM234BA2RU67 622 aa12.89□□□□□ -0.35
DDX39A-208ENST00000588692 AGAP5A6NIR3 686 aa12.89□□□□□ -0.35
DDX39A-208ENST00000588692 HMGB1P1B2RPK0 211 aaPredicted RBP12.89□□□□□ -0.35
DDX39A-208ENST00000588692 PRKD3O94806 890 aa12.89□□□□□ -0.35
DDX39A-208ENST00000588692 ANP32DO95626 131 aa12.89□□□□□ -0.35
DDX39A-208ENST00000588692 C1QCP02747 245 aa12.89□□□□□ -0.35
DDX39A-208ENST00000588692 RAF1P04049 648 aa12.89□□□□□ -0.35
DDX39A-208ENST00000588692 NR2F1P10589 423 aa12.89□□□□□ -0.35
DDX39A-208ENST00000588692 CRYGSP22914 178 aa12.89□□□□□ -0.35
DDX39A-208ENST00000588692 FKBP2P26885 142 aaKnown RBP12.89□□□□□ -0.35
DDX39A-208ENST00000588692 APOBEC1P41238 236 aaKnown RBP12.89□□□□□ -0.35
DDX39A-208ENST00000588692 STX1BP61266 288 aa12.89□□□□□ -0.35
DDX39A-208ENST00000588692 MERTKQ12866 999 aa12.89□□□□□ -0.35
DDX39A-208ENST00000588692 POU4F3Q15319 338 aa12.89□□□□□ -0.35
DDX39A-208ENST00000588692 EXOC3L2Q2M3D2 409 aa12.89□□□□□ -0.35
DDX39A-208ENST00000588692 TTMPQ5BVD1 217 aa12.89□□□□□ -0.35
DDX39A-208ENST00000588692 DNAJC14Q6Y2X3 702 aaPredicted RBP12.89□□□□□ -0.35
DDX39A-208ENST00000588692 PLEKHM3Q6ZWE6 761 aa12.89□□□□□ -0.35
DDX39A-208ENST00000588692 HDXQ7Z353 690 aa12.89□□□□□ -0.35
DDX39A-208ENST00000588692 ARFGAP2Q8N6H7 521 aa12.89□□□□□ -0.35
DDX39A-208ENST00000588692 ANKFN1Q8N957 763 aa12.89□□□□□ -0.35
DDX39A-208ENST00000588692 ZNF563Q8TA94 476 aa12.89□□□□□ -0.35
DDX39A-208ENST00000588692 PNPT1Q8TCS8 783 aaKnown RBP12.89□□□□□ -0.35
DDX39A-208ENST00000588692 DYDC1Q8WWB3 177 aa12.89□□□□□ -0.35
DDX39A-208ENST00000588692 ZG16BQ96DA0 208 aa12.89□□□□□ -0.35
DDX39A-208ENST00000588692 MBD6Q96DN6 1003 aa12.89□□□□□ -0.35
DDX39A-208ENST00000588692 ALPK1Q96QP1 1244 aa12.89□□□□□ -0.35
DDX39A-208ENST00000588692 KLHL4Q9C0H6 718 aa12.89□□□□□ -0.35
DDX39A-208ENST00000588692 QRSL1Q9H0R6 528 aaKnown RBP12.89□□□□□ -0.35
DDX39A-208ENST00000588692 OR10A4Q9H209 315 aa12.89□□□□□ -0.35
DDX39A-208ENST00000588692 MTHFD2LQ9H903 347 aaPredicted RBP12.89□□□□□ -0.35
DDX39A-208ENST00000588692 VIPAS39Q9H9C1 493 aa12.89□□□□□ -0.35
DDX39A-208ENST00000588692 TCF7L2Q9NQB0 619 aa12.89□□□□□ -0.35
DDX39A-208ENST00000588692 THUMPD1Q9NXG2 353 aaKnown RBP12.89□□□□□ -0.35
DDX39A-208ENST00000588692 CALML5Q9NZT1 146 aa12.89□□□□□ -0.35
DDX39A-208ENST00000588692 KLHL9Q9P2J3 617 aa12.89□□□□□ -0.35
DDX39A-208ENST00000588692 P2RX2Q9UBL9 471 aa12.89□□□□□ -0.35
DDX39A-208ENST00000588692 PLEKHA6Q9Y2H5 1048 aa12.89□□□□□ -0.35
DDX39A-208ENST00000588692 DBIP07108 87 aaKnown RBP12.88□□□□□ -0.35
DDX39A-208ENST00000588692 CHRM4P08173 479 aa12.88□□□□□ -0.35
DDX39A-208ENST00000588692 RPS4Y1P22090 263 aaKnown RBP12.88□□□□□ -0.35
DDX39A-208ENST00000588692 MVDP53602 400 aa12.88□□□□□ -0.35
DDX39A-208ENST00000588692 CSNK2A1P68400 391 aaPredicted RBP12.88□□□□□ -0.35
DDX39A-208ENST00000588692 SYT14P1Q58G82 188 aa12.88□□□□□ -0.35
DDX39A-208ENST00000588692 COX20Q5RI15 118 aa12.88□□□□□ -0.35
DDX39A-208ENST00000588692 GRINAQ7Z429 371 aa12.88□□□□□ -0.35
DDX39A-208ENST00000588692 OR9I1Q8NGQ6 314 aa12.88□□□□□ -0.35
DDX39A-208ENST00000588692 WDR60Q8WVS4 1066 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms