RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 RTN4RQ9BZR6 473 aa14.13□□□□□ -0.15
NCLN-203ENST00000587740 SAP130Q9H0E3 1048 aa14.13□□□□□ -0.15
NCLN-203ENST00000587740 DSN1Q9H410 356 aa14.13□□□□□ -0.15
NCLN-203ENST00000587740 PTGES2Q9H7Z7 377 aa14.13□□□□□ -0.15
NCLN-203ENST00000587740 CALHM2Q9HA72 323 aa14.13□□□□□ -0.15
NCLN-203ENST00000587740 GID8Q9NWU2 228 aa14.13□□□□□ -0.15
NCLN-203ENST00000587740 DTNAQ9Y4J8 743 aa14.13□□□□□ -0.15
NCLN-203ENST00000587740 TRIM64A6NGJ6 449 aa14.12□□□□□ -0.15
NCLN-203ENST00000587740 TRIM64BA6NI03 449 aa14.12□□□□□ -0.15
NCLN-203ENST00000587740 NPIPB9F8W1W9 429 aa14.12□□□□□ -0.15
NCLN-203ENST00000587740 GTPBP1O00178 669 aaKnown RBP14.12□□□□□ -0.15
NCLN-203ENST00000587740 SIAH2O43255 324 aa14.12□□□□□ -0.15
NCLN-203ENST00000587740 KIAA0513O60268 411 aa14.12□□□□□ -0.15
NCLN-203ENST00000587740 BCHEP06276 602 aa14.12□□□□□ -0.15
NCLN-203ENST00000587740 TMIGD3P0DMS9 266 aaPredicted RBP14.12□□□□□ -0.15
NCLN-203ENST00000587740 BMP2P12643 396 aa14.12□□□□□ -0.15
NCLN-203ENST00000587740 CRISP3P54108 245 aa14.12□□□□□ -0.15
NCLN-203ENST00000587740 CHRNEQ04844 493 aa14.12□□□□□ -0.15
NCLN-203ENST00000587740 CAPRIN1Q14444 709 aaKnown RBP14.12□□□□□ -0.15
NCLN-203ENST00000587740 PDZK1Q5T2W1 519 aa14.12□□□□□ -0.15
NCLN-203ENST00000587740 PLXDC2Q6UX71 529 aa14.12□□□□□ -0.15
NCLN-203ENST00000587740 FRRS1Q6ZNA5 592 aa14.12□□□□□ -0.15
NCLN-203ENST00000587740 LUZP2Q86TE4 346 aa14.12□□□□□ -0.15
NCLN-203ENST00000587740 FADS6Q8N9I5 356 aa14.12□□□□□ -0.15
NCLN-203ENST00000587740 OR2M3Q8NG83 312 aa14.12□□□□□ -0.15
NCLN-203ENST00000587740 OIT3Q8WWZ8 545 aa14.12□□□□□ -0.15
NCLN-203ENST00000587740 LRRC58Q96CX6 371 aa14.12□□□□□ -0.15
NCLN-203ENST00000587740 CMTM5Q96DZ9 223 aa14.12□□□□□ -0.15
NCLN-203ENST00000587740 LRRC37BQ96QE4 947 aa14.12□□□□□ -0.15
NCLN-203ENST00000587740 PIP5K1AQ99755 562 aa14.12□□□□□ -0.15
NCLN-203ENST00000587740 THUMPD3Q9BV44 507 aaKnown RBP14.12□□□□□ -0.15
NCLN-203ENST00000587740 SLC38A1Q9H2H9 487 aa14.12□□□□□ -0.15
NCLN-203ENST00000587740 MTHFD2LQ9H903 347 aaPredicted RBP14.12□□□□□ -0.15
NCLN-203ENST00000587740 MED11Q9P086 117 aa14.12□□□□□ -0.15
NCLN-203ENST00000587740 FBXL2Q9UKC9 423 aa14.12□□□□□ -0.15
NCLN-203ENST00000587740 C17orf51A8MQB3 221 aa14.11□□□□□ -0.15
NCLN-203ENST00000587740 SMPD2O60906 423 aa14.11□□□□□ -0.15
NCLN-203ENST00000587740 TNFRSF21O75509 655 aa14.11□□□□□ -0.15
NCLN-203ENST00000587740 UGT2B17O75795 530 aa14.11□□□□□ -0.15
NCLN-203ENST00000587740 CHRM4P08173 479 aa14.11□□□□□ -0.15
NCLN-203ENST00000587740 TFPTP0C1Z6 253 aa14.11□□□□□ -0.15
NCLN-203ENST00000587740 GPX2P18283 190 aa14.11□□□□□ -0.15
NCLN-203ENST00000587740 DPP4P27487 766 aa14.11□□□□□ -0.15
NCLN-203ENST00000587740 SRD5A2P31213 254 aa14.11□□□□□ -0.15
NCLN-203ENST00000587740 DSCR4P56555 118 aaPredicted RBP14.11□□□□□ -0.15
NCLN-203ENST00000587740 SF3B4Q15427 424 aaKnown RBP eCLIP14.11□□□□□ -0.155e-9■■■■□ 22.6
NCLN-203ENST00000587740 ZNF141Q15928 474 aa14.11□□□□□ -0.15
NCLN-203ENST00000587740 WIPI1Q5MNZ9 446 aaPredicted RBP14.11□□□□□ -0.15
NCLN-203ENST00000587740 GCNT6Q5T4J0 391 aa14.11□□□□□ -0.15
NCLN-203ENST00000587740 AP1ARQ63HQ0 302 aa14.11□□□□□ -0.15
NCLN-203ENST00000587740 PRSS57Q6UWY2 283 aa14.11□□□□□ -0.15
NCLN-203ENST00000587740 YTHDF3Q7Z739 585 aaKnown RBP14.11□□□□□ -0.15
NCLN-203ENST00000587740 TREML1Q86YW5 311 aa14.11□□□□□ -0.15
NCLN-203ENST00000587740 ANKS4BQ8N8V4 417 aa14.11□□□□□ -0.15
NCLN-203ENST00000587740 FAM83FQ8NEG4 500 aaPredicted RBP14.11□□□□□ -0.15
NCLN-203ENST00000587740 OR14L1PQ8NHC6 308 aa14.11□□□□□ -0.15
NCLN-203ENST00000587740 SLC38A5Q8WUX1 472 aa14.11□□□□□ -0.15
NCLN-203ENST00000587740 PMM1Q92871 262 aa14.11□□□□□ -0.15
NCLN-203ENST00000587740 ABTB1Q969K4 478 aaPredicted RBP14.11□□□□□ -0.15
NCLN-203ENST00000587740 RCN3Q96D15 328 aa14.11□□□□□ -0.15
NCLN-203ENST00000587740 SH3GL1Q99961 368 aa14.11□□□□□ -0.15
NCLN-203ENST00000587740 BDH2Q9BUT1 245 aa14.11□□□□□ -0.15
NCLN-203ENST00000587740 IKZF5Q9H5V7 419 aa14.11□□□□□ -0.15
NCLN-203ENST00000587740 EFCAB1Q9HAE3 211 aa14.11□□□□□ -0.15
NCLN-203ENST00000587740 A4GALTQ9NPC4 353 aa14.11□□□□□ -0.15
NCLN-203ENST00000587740 DKKL1Q9UK85 242 aa14.11□□□□□ -0.15
NCLN-203ENST00000587740 USF3Q68DE3 2245 aa14.11□□□□□ -0.15
NCLN-203ENST00000587740 IGLV3-32A0A0A0MS00 114 aa14.1□□□□□ -0.15
NCLN-203ENST00000587740 SERINC4A6NH21 518 aa14.1□□□□□ -0.15
NCLN-203ENST00000587740 C5orf58C9J3I9 102 aa14.1□□□□□ -0.15
NCLN-203ENST00000587740 GMFGO60234 142 aa14.1□□□□□ -0.15
NCLN-203ENST00000587740 NUDT7P0C024 238 aa14.1□□□□□ -0.15
NCLN-203ENST00000587740 GCKP35557 465 aa14.1□□□□□ -0.15
NCLN-203ENST00000587740 RNF144AP50876 292 aaPredicted RBP14.1□□□□□ -0.15
NCLN-203ENST00000587740 MTPNP58546 118 aa14.1□□□□□ -0.15
NCLN-203ENST00000587740 GANABQ14697 944 aaKnown RBP14.1□□□□□ -0.15
NCLN-203ENST00000587740 CD226Q15762 336 aa14.1□□□□□ -0.15
NCLN-203ENST00000587740 NANOGP8Q6NSW7 305 aa14.1□□□□□ -0.15
NCLN-203ENST00000587740 YRDCQ86U90 279 aaKnown RBP14.1□□□□□ -0.15
NCLN-203ENST00000587740 PEX5LQ8IYB4 626 aa14.1□□□□□ -0.15
NCLN-203ENST00000587740 METTL25Q8N6Q8 603 aa14.1□□□□□ -0.15
NCLN-203ENST00000587740 CCDC197Q8NCU1 140 aa14.1□□□□□ -0.15
NCLN-203ENST00000587740 B4GALNT2Q8NHY0 566 aa14.1□□□□□ -0.15
NCLN-203ENST00000587740 ZPLD1Q8TCW7 415 aa14.1□□□□□ -0.15
NCLN-203ENST00000587740 MAL2Q969L2 176 aa14.1□□□□□ -0.15
NCLN-203ENST00000587740 TMEM19Q96HH6 336 aa14.1□□□□□ -0.15
NCLN-203ENST00000587740 SH3YL1Q96HL8 342 aaPredicted RBP14.1□□□□□ -0.15
NCLN-203ENST00000587740 OR2B2Q9GZK3 357 aa14.1□□□□□ -0.15
NCLN-203ENST00000587740 NANOGQ9H9S0 305 aa14.1□□□□□ -0.15
NCLN-203ENST00000587740 CACYBPQ9HB71 228 aaKnown RBP14.1□□□□□ -0.15
NCLN-203ENST00000587740 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.1□□□□□ -0.15
NCLN-203ENST00000587740 TAS2R10Q9NYW0 307 aa14.1□□□□□ -0.15
NCLN-203ENST00000587740 C6orf203Q9P0P8 240 aaPredicted RBP14.1□□□□□ -0.15
NCLN-203ENST00000587740 KCNE5Q9UJ90 142 aa14.1□□□□□ -0.15
NCLN-203ENST00000587740 MRPS18CQ9Y3D5 142 aaKnown RBP14.1□□□□□ -0.15
NCLN-203ENST00000587740 CHD3Q12873 2000 aaKnown RBP14.09□□□□□ -0.15
NCLN-203ENST00000587740 A0A0G2JPF8 293 aa14.09□□□□□ -0.15
NCLN-203ENST00000587740 DEFB108AA8MXU0 73 aa14.09□□□□□ -0.15
NCLN-203ENST00000587740 HNRNPCL2B2RXH8 293 aa14.09□□□□□ -0.15
NCLN-203ENST00000587740 B4DXG7 233 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms