RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 SOHLH2Q9NX45 425 aa2.12□□□□□ -2.07
VAPA-208ENST00000584796 ELOVL2Q9NXB9 296 aa2.12□□□□□ -2.07
VAPA-208ENST00000584796 FBXL12Q9NXK8 326 aa2.12□□□□□ -2.07
VAPA-208ENST00000584796 TBC1D7Q9P0N9 293 aa2.12□□□□□ -2.07
VAPA-208ENST00000584796 PISDQ9UG56 409 aa2.12□□□□□ -2.07
VAPA-208ENST00000584796 GPR132Q9UNW8 380 aa2.12□□□□□ -2.07
VAPA-208ENST00000584796 NTNG1Q9Y2I2 539 aa2.12□□□□□ -2.07
VAPA-208ENST00000584796 GTF3C1Q12789 2109 aa2.12□□□□□ -2.07
VAPA-208ENST00000584796 SEC16AO15027 2179 aa2.11□□□□□ -2.07
VAPA-208ENST00000584796 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.11□□□□□ -2.07
VAPA-208ENST00000584796 FEZF1A0PJY2 475 aa2.11□□□□□ -2.07
VAPA-208ENST00000584796 TCP11X1B4DZS4 312 aa2.11□□□□□ -2.07
VAPA-208ENST00000584796 F8WDY8 70 aa2.11□□□□□ -2.07
VAPA-208ENST00000584796 SLC9A3R1O14745 358 aaPredicted RBP2.11□□□□□ -2.07
VAPA-208ENST00000584796 CASQ2O14958 399 aaPredicted RBP2.11□□□□□ -2.07
VAPA-208ENST00000584796 CTDSPLO15194 276 aa2.11□□□□□ -2.07
VAPA-208ENST00000584796 NEMFO60524 1076 aa2.11□□□□□ -2.07
VAPA-208ENST00000584796 GALR3O60755 368 aaPredicted RBP2.11□□□□□ -2.07
VAPA-208ENST00000584796 LRCH4O75427 683 aa2.11□□□□□ -2.07
VAPA-208ENST00000584796 POP4O95707 220 aaKnown RBP2.11□□□□□ -2.07
VAPA-208ENST00000584796 PRB2P02812 416 aaPredicted RBP2.11□□□□□ -2.07
VAPA-208ENST00000584796 KRT6BP04259 564 aa2.11□□□□□ -2.07
VAPA-208ENST00000584796 SBK2P0C263 348 aa2.11□□□□□ -2.07
VAPA-208ENST00000584796 CCDC159P0C7I6 412 aa2.11□□□□□ -2.07
VAPA-208ENST00000584796 OR2T7P0C7T2 308 aa2.11□□□□□ -2.07
VAPA-208ENST00000584796 LIPCP11150 499 aa2.11□□□□□ -2.07
VAPA-208ENST00000584796 GCFC2P16383 781 aaKnown RBP2.11□□□□□ -2.07
VAPA-208ENST00000584796 PDHA2P29803 388 aa2.11□□□□□ -2.07
VAPA-208ENST00000584796 OXTRP30559 389 aa2.11□□□□□ -2.07
VAPA-208ENST00000584796 CSTF2P33240 577 aaKnown RBP eCLIP2.11□□□□□ -2.07
VAPA-208ENST00000584796 CCT6AP40227 531 aaKnown RBP2.11□□□□□ -2.07
VAPA-208ENST00000584796 NPBWR1P48145 328 aa2.11□□□□□ -2.07
VAPA-208ENST00000584796 KRT6CP48668 564 aa2.11□□□□□ -2.07
VAPA-208ENST00000584796 PITPNBP48739 271 aa2.11□□□□□ -2.07
VAPA-208ENST00000584796 HNRNPKP61978 463 aaKnown RBP eCLIP2.11□□□□□ -2.07
VAPA-208ENST00000584796 NOP14P78316 857 aaKnown RBP2.11□□□□□ -2.07
VAPA-208ENST00000584796 CCL7P80098 99 aa2.11□□□□□ -2.07
VAPA-208ENST00000584796 TFAMQ00059 246 aaKnown RBP2.11□□□□□ -2.07
VAPA-208ENST00000584796 MAT1AQ00266 395 aaKnown RBP2.11□□□□□ -2.07
VAPA-208ENST00000584796 GALK2Q01415 458 aa2.11□□□□□ -2.07
VAPA-208ENST00000584796 FOLH1Q04609 750 aa2.11□□□□□ -2.07
VAPA-208ENST00000584796 ELP6Q0PNE2 266 aa2.11□□□□□ -2.07
VAPA-208ENST00000584796 IFT88Q13099 833 aa2.11□□□□□ -2.07
VAPA-208ENST00000584796 ZNF177Q13360 481 aaPredicted RBP2.11□□□□□ -2.07
VAPA-208ENST00000584796 ILKQ13418 452 aa2.11□□□□□ -2.07
VAPA-208ENST00000584796 TMED1Q13445 227 aa2.11□□□□□ -2.07
VAPA-208ENST00000584796 FZD2Q14332 565 aa2.11□□□□□ -2.07
VAPA-208ENST00000584796 CAPRIN1Q14444 709 aaKnown RBP2.11□□□□□ -2.07
VAPA-208ENST00000584796 TAB1Q15750 504 aa2.11□□□□□ -2.07
VAPA-208ENST00000584796 C3AR1Q16581 482 aa2.11□□□□□ -2.07
VAPA-208ENST00000584796 CA9Q16790 459 aa2.11□□□□□ -2.07
VAPA-208ENST00000584796 DEFB109BQ30KR1 87 aa2.11□□□□□ -2.07
VAPA-208ENST00000584796 LRRC23Q53EV4 343 aaPredicted RBP2.11□□□□□ -2.07
VAPA-208ENST00000584796 BOLA3Q53S33 107 aa2.11□□□□□ -2.07
VAPA-208ENST00000584796 FAM182AQ5T1J6 154 aa2.11□□□□□ -2.07
VAPA-208ENST00000584796 C9orf64Q5T6V5 341 aa2.11□□□□□ -2.07
VAPA-208ENST00000584796 FHL5Q5TD97 284 aa2.11□□□□□ -2.07
VAPA-208ENST00000584796 DMKNQ6E0U4 476 aaPredicted RBP2.11□□□□□ -2.07
VAPA-208ENST00000584796 RFWD3Q6PCD5 774 aa2.11□□□□□ -2.07
VAPA-208ENST00000584796 PODNL1Q6PEZ8 512 aa2.11□□□□□ -2.07
VAPA-208ENST00000584796 ARSKQ6UWY0 536 aa2.11□□□□□ -2.07
VAPA-208ENST00000584796 CDHR3Q6ZTQ4 885 aa2.11□□□□□ -2.07
VAPA-208ENST00000584796 Q71RC1 249 aaPredicted RBP2.11□□□□□ -2.07
VAPA-208ENST00000584796 RUFY3Q7L099 469 aa2.11□□□□□ -2.07
VAPA-208ENST00000584796 TIPARPQ7Z3E1 657 aaKnown RBP2.11□□□□□ -2.07
VAPA-208ENST00000584796 TRMT11Q7Z4G4 463 aaKnown RBP2.11□□□□□ -2.07
VAPA-208ENST00000584796 PIGWQ7Z7B1 504 aa2.11□□□□□ -2.07
VAPA-208ENST00000584796 EGFL6Q8IUX8 553 aa2.11□□□□□ -2.07
VAPA-208ENST00000584796 MMAAQ8IVH4 418 aaKnown RBP2.11□□□□□ -2.07
VAPA-208ENST00000584796 KLHDC8AQ8IYD2 350 aa2.11□□□□□ -2.07
VAPA-208ENST00000584796 THEM5Q8N1Q8 247 aa2.11□□□□□ -2.07
VAPA-208ENST00000584796 STK40Q8N2I9 435 aa2.11□□□□□ -2.07
VAPA-208ENST00000584796 NECAB1Q8N987 351 aa2.11□□□□□ -2.07
VAPA-208ENST00000584796 CLEC1AQ8NC01 280 aa2.11□□□□□ -2.07
VAPA-208ENST00000584796 CCDC12Q8WUD4 166 aaPredicted RBP2.11□□□□□ -2.07
VAPA-208ENST00000584796 GIMAP1Q8WWP7 306 aa2.11□□□□□ -2.07
VAPA-208ENST00000584796 NRGNQ92686 78 aa2.11□□□□□ -2.07
VAPA-208ENST00000584796 KIFAP3Q92845 792 aa2.11□□□□□ -2.07
VAPA-208ENST00000584796 MOB3AQ96BX8 217 aa2.11□□□□□ -2.07
VAPA-208ENST00000584796 SPDL1Q96EA4 605 aa2.11□□□□□ -2.07
VAPA-208ENST00000584796 DTD2Q96FN9 168 aa2.11□□□□□ -2.07
VAPA-208ENST00000584796 IFT74Q96LB3 600 aa2.11□□□□□ -2.07
VAPA-208ENST00000584796 BMFQ96LC9 184 aa2.11□□□□□ -2.07
VAPA-208ENST00000584796 LURAP1Q96LR2 239 aa2.11□□□□□ -2.07
VAPA-208ENST00000584796 FAM218AQ96MZ4 157 aa2.11□□□□□ -2.07
VAPA-208ENST00000584796 FEVQ99581 238 aa2.11□□□□□ -2.07
VAPA-208ENST00000584796 LPAR4Q99677 370 aa2.11□□□□□ -2.07
VAPA-208ENST00000584796 OLFM1Q99784 485 aa2.11□□□□□ -2.07
VAPA-208ENST00000584796 SSX3Q99909 188 aa2.11□□□□□ -2.07
VAPA-208ENST00000584796 SMR3AQ99954 134 aa2.11□□□□□ -2.07
VAPA-208ENST00000584796 ACBD6Q9BR61 282 aa2.11□□□□□ -2.07
VAPA-208ENST00000584796 FAM213AQ9BRX8 229 aa2.11□□□□□ -2.07
VAPA-208ENST00000584796 ERP44Q9BS26 406 aa2.11□□□□□ -2.07
VAPA-208ENST00000584796 ATG101Q9BSB4 218 aa2.11□□□□□ -2.07
VAPA-208ENST00000584796 CHCHD5Q9BSY4 110 aa2.11□□□□□ -2.07
VAPA-208ENST00000584796 TPPP3Q9BW30 176 aa2.11□□□□□ -2.07
VAPA-208ENST00000584796 CARD6Q9BX69 1037 aa2.11□□□□□ -2.07
VAPA-208ENST00000584796 ACPTQ9BZG2 426 aa2.11□□□□□ -2.07
VAPA-208ENST00000584796 DDX47Q9H0S4 455 aaKnown RBP2.11□□□□□ -2.07
VAPA-208ENST00000584796 SLITRK2Q9H156 845 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms