RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-223ENST00000584760 HMGN2P46Q86SG4 172 aa11.92□□□□□ -0.5
SREBF1-223ENST00000584760 LILRA2Q8N149 483 aa11.92□□□□□ -0.5
SREBF1-223ENST00000584760 RFWD2Q8NHY2 731 aa11.92□□□□□ -0.5
SREBF1-223ENST00000584760 FAM222BQ8WU58 562 aa11.92□□□□□ -0.5
SREBF1-223ENST00000584760 STON2Q8WXE9 905 aa11.92□□□□□ -0.5
SREBF1-223ENST00000584760 ST8SIA1Q92185 356 aa11.92□□□□□ -0.5
SREBF1-223ENST00000584760 ITCHQ96J02 903 aa11.92□□□□□ -0.5
SREBF1-223ENST00000584760 MAGEB18Q96M61 343 aa11.92□□□□□ -0.5
SREBF1-223ENST00000584760 SMR3AQ99954 134 aa11.92□□□□□ -0.5
SREBF1-223ENST00000584760 RMND5AQ9H871 391 aa11.92□□□□□ -0.5
SREBF1-223ENST00000584760 COQ10BQ9H8M1 238 aa11.92□□□□□ -0.5
SREBF1-223ENST00000584760 RASSF1Q9NS23 344 aa11.92□□□□□ -0.5
SREBF1-223ENST00000584760 EDARQ9UNE0 448 aa11.92□□□□□ -0.5
SREBF1-223ENST00000584760 LIPT1Q9Y234 373 aa11.92□□□□□ -0.5
SREBF1-223ENST00000584760 SLC35A3Q9Y2D2 325 aa11.92□□□□□ -0.5
SREBF1-223ENST00000584760 MAP1AP78559 2803 aaPredicted RBP11.92□□□□□ -0.5
SREBF1-223ENST00000584760 TUBAL3A6NHL2 446 aa11.91□□□□□ -0.5
SREBF1-223ENST00000584760 CLDN24A6NM45 220 aa11.91□□□□□ -0.5
SREBF1-223ENST00000584760 CXCL13O43927 109 aa11.91□□□□□ -0.5
SREBF1-223ENST00000584760 CYP7B1O75881 506 aa11.91□□□□□ -0.5
SREBF1-223ENST00000584760 CGAP01215 116 aa11.91□□□□□ -0.5
SREBF1-223ENST00000584760 CPOXP36551 454 aa11.91□□□□□ -0.5
SREBF1-223ENST00000584760 PCYT1AP49585 367 aa11.91□□□□□ -0.5
SREBF1-223ENST00000584760 STX1BP61266 288 aa11.91□□□□□ -0.5
SREBF1-223ENST00000584760 ZNF239Q16600 458 aaKnown RBP11.91□□□□□ -0.5
SREBF1-223ENST00000584760 C6orf10Q5SRN2 563 aa11.91□□□□□ -0.5
SREBF1-223ENST00000584760 LRRC74BQ6ZQY2 392 aa11.91□□□□□ -0.5
SREBF1-223ENST00000584760 CDC20BQ86Y33 519 aa11.91□□□□□ -0.5
SREBF1-223ENST00000584760 FUNDC1Q8IVP5 155 aa11.91□□□□□ -0.5
SREBF1-223ENST00000584760 GTF2H4Q92759 462 aa11.91□□□□□ -0.5
SREBF1-223ENST00000584760 AURKBQ96GD4 344 aaPredicted RBP11.91□□□□□ -0.5
SREBF1-223ENST00000584760 ALPK1Q96QP1 1244 aa11.91□□□□□ -0.5
SREBF1-223ENST00000584760 THUMPD3Q9BV44 507 aaKnown RBP11.91□□□□□ -0.5
SREBF1-223ENST00000584760 SRXN1Q9BYN0 137 aa11.91□□□□□ -0.5
SREBF1-223ENST00000584760 PAIP1Q9H074 479 aaKnown RBP11.91□□□□□ -0.5
SREBF1-223ENST00000584760 TPT1P8Q9HAU6 139 aa11.91□□□□□ -0.5
SREBF1-223ENST00000584760 EXOSC3Q9NQT5 275 aaKnown RBP11.91□□□□□ -0.5
SREBF1-223ENST00000584760 ZNF446Q9NWS9 450 aa11.91□□□□□ -0.5
SREBF1-223ENST00000584760 MCTS1Q9ULC4 181 aaKnown RBP11.91□□□□□ -0.5
SREBF1-223ENST00000584760 ABCA4P78363 2273 aa11.9□□□□□ -0.5
SREBF1-223ENST00000584760 DSPPQ9NZW4 1301 aa11.9□□□□□ -0.5
SREBF1-223ENST00000584760 AGAP5A6NIR3 686 aa11.9□□□□□ -0.5
SREBF1-223ENST00000584760 GJE1A6NN92 205 aa11.9□□□□□ -0.5
SREBF1-223ENST00000584760 A6NNC1 897 aa11.9□□□□□ -0.5
SREBF1-223ENST00000584760 ADAM11O75078 769 aa11.9□□□□□ -0.5
SREBF1-223ENST00000584760 SS18L1O75177 396 aaPredicted RBP11.9□□□□□ -0.5
SREBF1-223ENST00000584760 SMNDC1O75940 238 aaKnown RBP eCLIP11.9□□□□□ -0.52e-6■■□□□ 12.7
SREBF1-223ENST00000584760 ANP32DO95626 131 aa11.9□□□□□ -0.5
SREBF1-223ENST00000584760 CD8BP10966 210 aa11.9□□□□□ -0.5
SREBF1-223ENST00000584760 ETFAP13804 333 aa11.9□□□□□ -0.5
SREBF1-223ENST00000584760 CCKARP32238 428 aa11.9□□□□□ -0.5
SREBF1-223ENST00000584760 SESN3P58005 492 aa11.9□□□□□ -0.5
SREBF1-223ENST00000584760 KCNJ10P78508 379 aa11.9□□□□□ -0.5
SREBF1-223ENST00000584760 FREM1Q5H8C1 2179 aa11.9□□□□□ -0.5
SREBF1-223ENST00000584760 PDSS1Q5T2R2 415 aa11.9□□□□□ -0.5
SREBF1-223ENST00000584760 PPP4R4Q6NUP7 873 aa11.9□□□□□ -0.5
SREBF1-223ENST00000584760 C3orf33Q6P1S2 294 aa11.9□□□□□ -0.5
SREBF1-223ENST00000584760 SLC2A7Q6PXP3 512 aa11.9□□□□□ -0.5
SREBF1-223ENST00000584760 BLOC1S3Q6QNY0 202 aa11.9□□□□□ -0.5
SREBF1-223ENST00000584760 ZNF474Q6S9Z5 364 aaPredicted RBP11.9□□□□□ -0.5
SREBF1-223ENST00000584760 FAM214BQ7L5A3 538 aa11.9□□□□□ -0.5
SREBF1-223ENST00000584760 BIVMQ86UB2 503 aa11.9□□□□□ -0.5
SREBF1-223ENST00000584760 LINC01560Q8TB33 94 aa11.9□□□□□ -0.5
SREBF1-223ENST00000584760 RNF128Q8TEB7 428 aa11.9□□□□□ -0.5
SREBF1-223ENST00000584760 GMPPAQ96IJ6 420 aaPredicted RBP11.9□□□□□ -0.5
SREBF1-223ENST00000584760 PRRG4Q9BZD6 226 aa11.9□□□□□ -0.5
SREBF1-223ENST00000584760 OPN3Q9H1Y3 402 aaPredicted RBP11.9□□□□□ -0.5
SREBF1-223ENST00000584760 SLC52A3Q9NQ40 469 aa11.9□□□□□ -0.5
SREBF1-223ENST00000584760 ACER3Q9NUN7 267 aa11.9□□□□□ -0.5
SREBF1-223ENST00000584760 CCDC167Q9P0B6 97 aa11.9□□□□□ -0.5
SREBF1-223ENST00000584760 P2RX2Q9UBL9 471 aa11.9□□□□□ -0.5
SREBF1-223ENST00000584760 AKAP6Q13023 2319 aa11.89□□□□□ -0.51
SREBF1-223ENST00000584760 NR5A2O00482 541 aa11.89□□□□□ -0.51
SREBF1-223ENST00000584760 SYNGR4O95473 234 aa11.89□□□□□ -0.51
SREBF1-223ENST00000584760 NR2F1P10589 423 aa11.89□□□□□ -0.51
SREBF1-223ENST00000584760 EPXP11678 715 aa11.89□□□□□ -0.51
SREBF1-223ENST00000584760 PGCP20142 388 aa11.89□□□□□ -0.51
SREBF1-223ENST00000584760 ATP4BP51164 291 aa11.89□□□□□ -0.51
SREBF1-223ENST00000584760 CARD18P57730 90 aa11.89□□□□□ -0.51
SREBF1-223ENST00000584760 DSTNP60981 165 aa11.89□□□□□ -0.51
SREBF1-223ENST00000584760 SQLEQ14534 574 aa11.89□□□□□ -0.51
SREBF1-223ENST00000584760 DAZAP2Q15038 168 aaPredicted RBP11.89□□□□□ -0.51
SREBF1-223ENST00000584760 TMEM176BQ3YBM2 270 aaPredicted RBP11.89□□□□□ -0.51
SREBF1-223ENST00000584760 CMIPQ8IY22 773 aa11.89□□□□□ -0.51
SREBF1-223ENST00000584760 WFDC11Q8NEX6 87 aa11.89□□□□□ -0.51
SREBF1-223ENST00000584760 OR6K3Q8NGY3 331 aa11.89□□□□□ -0.51
SREBF1-223ENST00000584760 ABHD3Q8WU67 409 aa11.89□□□□□ -0.51
SREBF1-223ENST00000584760 TMEM234Q8WY98 164 aa11.89□□□□□ -0.51
SREBF1-223ENST00000584760 CNOT9Q92600 299 aaKnown RBP11.89□□□□□ -0.51
SREBF1-223ENST00000584760 OSTF1Q92882 214 aa11.89□□□□□ -0.51
SREBF1-223ENST00000584760 CPNE4Q96A23 557 aaPredicted RBP11.89□□□□□ -0.51
SREBF1-223ENST00000584760 SPDL1Q96EA4 605 aa11.89□□□□□ -0.51
SREBF1-223ENST00000584760 ZNF385DQ9H6B1 395 aa11.89□□□□□ -0.51
SREBF1-223ENST00000584760 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.89□□□□□ -0.51
SREBF1-223ENST00000584760 TMEM45AQ9NWC5 275 aa11.89□□□□□ -0.51
SREBF1-223ENST00000584760 SLC25A37Q9NYZ2 338 aa11.89□□□□□ -0.51
SREBF1-223ENST00000584760 CLEC4AQ9UMR7 237 aa11.89□□□□□ -0.51
SREBF1-223ENST00000584760 PCDHB14Q9Y5E9 798 aa11.89□□□□□ -0.51
SREBF1-223ENST00000584760 FBN3Q75N90 2809 aa11.89□□□□□ -0.51
SREBF1-223ENST00000584760 A0A096LPI6 279 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms