RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 SLC7A5P1Q8MH63 180 aa9.47□□□□□ -0.89
RFFL-212ENST00000584655 BCORP1Q8N888 145 aa9.47□□□□□ -0.89
RFFL-212ENST00000584655 GOT1L1Q8NHS2 421 aaPredicted RBP9.47□□□□□ -0.89
RFFL-212ENST00000584655 ZPLD1Q8TCW7 415 aa9.47□□□□□ -0.89
RFFL-212ENST00000584655 SLC2A12Q8TD20 617 aa9.47□□□□□ -0.89
RFFL-212ENST00000584655 PRRC1Q96M27 445 aa9.47□□□□□ -0.89
RFFL-212ENST00000584655 C19orf43Q9BQ61 176 aa9.47□□□□□ -0.89
RFFL-212ENST00000584655 BEX2Q9BXY8 128 aa9.47□□□□□ -0.89
RFFL-212ENST00000584655 BEX1Q9HBH7 125 aa9.47□□□□□ -0.89
RFFL-212ENST00000584655 SIDT1Q9NXL6 827 aaKnown RBP9.47□□□□□ -0.89
RFFL-212ENST00000584655 FAAHO00519 579 aa9.47□□□□□ -0.89
RFFL-212ENST00000584655 ARHGAP33O14559 1287 aa9.47□□□□□ -0.89
RFFL-212ENST00000584655 SMAD9O15198 467 aaKnown RBP9.47□□□□□ -0.89
RFFL-212ENST00000584655 SEC14L5O43304 696 aa9.47□□□□□ -0.89
RFFL-212ENST00000584655 CPNE3O75131 537 aaKnown RBP9.47□□□□□ -0.89
RFFL-212ENST00000584655 ALDH3B2P48448 385 aa9.47□□□□□ -0.89
RFFL-212ENST00000584655 EFNA3P52797 238 aa9.47□□□□□ -0.89
RFFL-212ENST00000584655 GNA13Q14344 377 aa9.47□□□□□ -0.89
RFFL-212ENST00000584655 SPHARQ15513 63 aa9.47□□□□□ -0.89
RFFL-212ENST00000584655 ZNF628Q5EBL2 1059 aa9.47□□□□□ -0.89
RFFL-212ENST00000584655 C3orf38Q5JPI3 329 aa9.47□□□□□ -0.89
RFFL-212ENST00000584655 MYO7BQ6PIF6 2116 aa9.47□□□□□ -0.89
RFFL-212ENST00000584655 ZNF574Q6ZN55 896 aaPredicted RBP9.47□□□□□ -0.89
RFFL-212ENST00000584655 MOSPD2Q8NHP6 518 aa9.47□□□□□ -0.89
RFFL-212ENST00000584655 IFI44Q8TCB0 444 aa9.47□□□□□ -0.89
RFFL-212ENST00000584655 NSMAFQ92636 917 aa9.47□□□□□ -0.89
RFFL-212ENST00000584655 CCDC74BQ96LY2 380 aa9.47□□□□□ -0.89
RFFL-212ENST00000584655 GFM1Q96RP9 751 aaKnown RBP9.47□□□□□ -0.89
RFFL-212ENST00000584655 RBM38Q9H0Z9 239 aaKnown RBP9.47□□□□□ -0.89
RFFL-212ENST00000584655 CHRDQ9H2X0 955 aa9.47□□□□□ -0.89
RFFL-212ENST00000584655 PIGUQ9H490 435 aa9.47□□□□□ -0.89
RFFL-212ENST00000584655 C19orf53Q9UNZ5 99 aaPredicted RBP9.47□□□□□ -0.89
RFFL-212ENST00000584655 DAPL1A0PJW8 107 aa9.46□□□□□ -0.89
RFFL-212ENST00000584655 MTNR1AP48039 350 aa9.46□□□□□ -0.89
RFFL-212ENST00000584655 SMSP52788 366 aa9.46□□□□□ -0.89
RFFL-212ENST00000584655 TPTEP56180 551 aa9.46□□□□□ -0.89
RFFL-212ENST00000584655 RTL4Q6ZR62 310 aa9.46□□□□□ -0.89
RFFL-212ENST00000584655 IZUMO1Q8IYV9 350 aa9.46□□□□□ -0.89
RFFL-212ENST00000584655 CYP4Z2PQ8N1L4 340 aa9.46□□□□□ -0.89
RFFL-212ENST00000584655 DIO2Q92813 273 aa9.46□□□□□ -0.89
RFFL-212ENST00000584655 NDEL1Q9GZM8 345 aa9.46□□□□□ -0.89
RFFL-212ENST00000584655 WNT16Q9UBV4 365 aa9.46□□□□□ -0.89
RFFL-212ENST00000584655 FER1L5A0AVI2 2057 aa9.46□□□□□ -0.9
RFFL-212ENST00000584655 AGAP5A6NIR3 686 aa9.46□□□□□ -0.9
RFFL-212ENST00000584655 SEC14L2O76054 403 aa9.46□□□□□ -0.9
RFFL-212ENST00000584655 C1DQ13901 141 aaKnown RBP9.46□□□□□ -0.9
RFFL-212ENST00000584655 NKAIN1Q4KMZ8 207 aa9.46□□□□□ -0.9
RFFL-212ENST00000584655 SYT14P1Q58G82 188 aa9.46□□□□□ -0.9
RFFL-212ENST00000584655 FAHD1Q6P587 224 aa9.46□□□□□ -0.9
RFFL-212ENST00000584655 PAPD4Q6PIY7 484 aaKnown RBP9.46□□□□□ -0.9
RFFL-212ENST00000584655 CXXC5Q7LFL8 322 aaKnown RBP9.46□□□□□ -0.9
RFFL-212ENST00000584655 SVOPQ8N4V2 548 aa9.46□□□□□ -0.9
RFFL-212ENST00000584655 TMEM99Q8N816 258 aa9.46□□□□□ -0.9
RFFL-212ENST00000584655 POC5Q8NA72 575 aa9.46□□□□□ -0.9
RFFL-212ENST00000584655 OR13F1Q8NGS4 319 aa9.46□□□□□ -0.9
RFFL-212ENST00000584655 BORCS5Q969J3 196 aa9.46□□□□□ -0.9
RFFL-212ENST00000584655 ZNF524Q96C55 264 aa9.46□□□□□ -0.9
RFFL-212ENST00000584655 TRMT61AQ96FX7 289 aaKnown RBP9.46□□□□□ -0.9
RFFL-212ENST00000584655 MOGAT1Q96PD6 335 aa9.46□□□□□ -0.9
RFFL-212ENST00000584655 UBQLN3Q9H347 655 aa9.46□□□□□ -0.9
RFFL-212ENST00000584655 GNG8Q9UK08 70 aa9.46□□□□□ -0.9
RFFL-212ENST00000584655 RARRES3Q9UL19 164 aa9.46□□□□□ -0.9
RFFL-212ENST00000584655 IFT52Q9Y366 437 aa9.46□□□□□ -0.9
RFFL-212ENST00000584655 A0A075B6Q4 140 aa9.46□□□□□ -0.9
RFFL-212ENST00000584655 A0A1W2PNR3 127 aa9.46□□□□□ -0.9
RFFL-212ENST00000584655 EFCAB10A6NFE3 127 aa9.46□□□□□ -0.9
RFFL-212ENST00000584655 NGFRP08138 427 aa9.46□□□□□ -0.9
RFFL-212ENST00000584655 TACR3P29371 465 aa9.46□□□□□ -0.9
RFFL-212ENST00000584655 EMP2P54851 167 aa9.46□□□□□ -0.9
RFFL-212ENST00000584655 CLDN12P56749 244 aa9.46□□□□□ -0.9
RFFL-212ENST00000584655 RPS25P62851 125 aaKnown RBP9.46□□□□□ -0.9
RFFL-212ENST00000584655 MRPS15P82914 257 aaKnown RBP9.46□□□□□ -0.9
RFFL-212ENST00000584655 MEP1BQ16820 701 aa9.46□□□□□ -0.9
RFFL-212ENST00000584655 C9orf135Q5VTT2 229 aa9.46□□□□□ -0.9
RFFL-212ENST00000584655 OR4C15Q8NGM1 316 aa9.46□□□□□ -0.9
RFFL-212ENST00000584655 THEM6Q8WUY1 208 aa9.46□□□□□ -0.9
RFFL-212ENST00000584655 TRNT1Q96Q11 434 aaKnown RBP9.46□□□□□ -0.9
RFFL-212ENST00000584655 MICU1Q9BPX6 476 aa9.46□□□□□ -0.9
RFFL-212ENST00000584655 KATNB1Q9BVA0 655 aa9.46□□□□□ -0.9
RFFL-212ENST00000584655 PRRG3Q9BZD7 231 aa9.46□□□□□ -0.9
RFFL-212ENST00000584655 MRPL15Q9P015 296 aaKnown RBP9.46□□□□□ -0.9
RFFL-212ENST00000584655 ZNF639Q9UID6 485 aa9.46□□□□□ -0.9
RFFL-212ENST00000584655 ADAM29Q9UKF5 820 aa9.46□□□□□ -0.9
RFFL-212ENST00000584655 IGHV3-15A0A0B4J1V0 119 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 CXorf51AA0A1B0GTR3 108 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 FAM25AB3EWG3 89 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 FAM25CB3EWG5 89 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 FAM25GB3EWG6 89 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 ZNF354AO60765 605 aaPredicted RBP9.45□□□□□ -0.9
RFFL-212ENST00000584655 OR5F1O95221 314 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 OR6A2O95222 327 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 IGHV3-9P01782 118 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 PRKAR1AP10644 381 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 SERPINB1P30740 379 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 S100A5P33763 92 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 HNRNPA0Q13151 305 aaKnown RBP9.45□□□□□ -0.9
RFFL-212ENST00000584655 GALNT6Q8NCL4 622 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 TANKQ92844 425 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 DCLRE1CQ96SD1 692 aaKnown RBP9.45□□□□□ -0.9
RFFL-212ENST00000584655 MEPEQ9NQ76 525 aaPredicted RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms