RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 HMGN4O00479 90 aa14.04□□□□□ -0.16
SKA2-209ENST00000583976 FADS1O60427 444 aa14.04□□□□□ -0.16
SKA2-209ENST00000583976 AQP8O94778 261 aa14.04□□□□□ -0.16
SKA2-209ENST00000583976 FAM107AO95990 144 aa14.04□□□□□ -0.16
SKA2-209ENST00000583976 CGAP01215 116 aa14.04□□□□□ -0.16
SKA2-209ENST00000583976 PEPDP12955 493 aa14.04□□□□□ -0.16
SKA2-209ENST00000583976 HOXB9P17482 250 aaPredicted RBP14.04□□□□□ -0.16
SKA2-209ENST00000583976 ATP6V1C1P21283 382 aa14.04□□□□□ -0.16
SKA2-209ENST00000583976 PCSK6P29122 969 aa14.04□□□□□ -0.16
SKA2-209ENST00000583976 CYLC2Q14093 348 aaPredicted RBP14.04□□□□□ -0.16
SKA2-209ENST00000583976 GUSBP1Q15486 140 aa14.04□□□□□ -0.16
SKA2-209ENST00000583976 BCL2A1Q16548 175 aa14.04□□□□□ -0.16
SKA2-209ENST00000583976 GPAT3Q53EU6 434 aa14.04□□□□□ -0.16
SKA2-209ENST00000583976 ANKRD34AQ69YU3 496 aa14.04□□□□□ -0.16
SKA2-209ENST00000583976 DLEU7Q6UYE1 221 aa14.04□□□□□ -0.16
SKA2-209ENST00000583976 CHMP1BQ7LBR1 199 aa14.04□□□□□ -0.16
SKA2-209ENST00000583976 YTHDF3Q7Z739 585 aaKnown RBP14.04□□□□□ -0.16
SKA2-209ENST00000583976 DHDDSQ86SQ9 333 aa14.04□□□□□ -0.16
SKA2-209ENST00000583976 MARCH3Q86UD3 253 aa14.04□□□□□ -0.16
SKA2-209ENST00000583976 MEIOBQ8N635 442 aa14.04□□□□□ -0.16
SKA2-209ENST00000583976 OR4C3Q8NH37 302 aa14.04□□□□□ -0.16
SKA2-209ENST00000583976 RNF122Q9H9V4 155 aa14.04□□□□□ -0.16
SKA2-209ENST00000583976 MRPS18CQ9Y3D5 142 aaKnown RBP14.04□□□□□ -0.16
SKA2-209ENST00000583976 DSCAMO60469 2012 aa14.03□□□□□ -0.16
SKA2-209ENST00000583976 CSPG4Q6UVK1 2322 aa14.03□□□□□ -0.16
SKA2-209ENST00000583976 SOX30O94993 753 aa14.03□□□□□ -0.16
SKA2-209ENST00000583976 AGR2O95994 175 aa14.03□□□□□ -0.16
SKA2-209ENST00000583976 CRHP06850 196 aa14.03□□□□□ -0.16
SKA2-209ENST00000583976 SLC6A8P48029 635 aa14.03□□□□□ -0.16
SKA2-209ENST00000583976 KCNJ5P48544 419 aa14.03□□□□□ -0.16
SKA2-209ENST00000583976 RNF144AP50876 292 aaPredicted RBP14.03□□□□□ -0.16
SKA2-209ENST00000583976 MVDP53602 400 aa14.03□□□□□ -0.16
SKA2-209ENST00000583976 CAPRIN1Q14444 709 aaKnown RBP14.03□□□□□ -0.16
SKA2-209ENST00000583976 GPR68Q15743 365 aa14.03□□□□□ -0.16
SKA2-209ENST00000583976 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.03□□□□□ -0.16
SKA2-209ENST00000583976 EXOC3L2Q2M3D2 409 aa14.03□□□□□ -0.16
SKA2-209ENST00000583976 ARHGAP11BQ3KRB8 267 aa14.03□□□□□ -0.16
SKA2-209ENST00000583976 REP15Q6BDI9 236 aa14.03□□□□□ -0.16
SKA2-209ENST00000583976 OR2A2Q6IF42 318 aa14.03□□□□□ -0.16
SKA2-209ENST00000583976 PPP4R4Q6NUP7 873 aa14.03□□□□□ -0.16
SKA2-209ENST00000583976 GGNQ86UU5 652 aa14.03□□□□□ -0.16
SKA2-209ENST00000583976 TREML1Q86YW5 311 aa14.03□□□□□ -0.16
SKA2-209ENST00000583976 DPP10Q8N608 796 aa14.03□□□□□ -0.16
SKA2-209ENST00000583976 C1GALT1C1Q96EU7 318 aa14.03□□□□□ -0.16
SKA2-209ENST00000583976 SDF2Q99470 211 aa14.03□□□□□ -0.16
SKA2-209ENST00000583976 NPAS1Q99742 590 aa14.03□□□□□ -0.16
SKA2-209ENST00000583976 PIP5K1AQ99755 562 aa14.03□□□□□ -0.16
SKA2-209ENST00000583976 MYLK2Q9H1R3 596 aa14.03□□□□□ -0.16
SKA2-209ENST00000583976 ZNF226Q9NYT6 803 aa14.03□□□□□ -0.16
SKA2-209ENST00000583976 MKLN1Q9UL63 735 aa14.03□□□□□ -0.16
SKA2-209ENST00000583976 CLEC4AQ9UMR7 237 aa14.03□□□□□ -0.16
SKA2-209ENST00000583976 ABCG2Q9UNQ0 655 aa14.03□□□□□ -0.16
SKA2-209ENST00000583976 PRAMEF27A3QJZ7 478 aa14.02□□□□□ -0.17
SKA2-209ENST00000583976 KIAA1324LA8MWY0 1029 aaPredicted RBP14.02□□□□□ -0.17
SKA2-209ENST00000583976 MRASO14807 208 aa14.02□□□□□ -0.17
SKA2-209ENST00000583976 SLC22A2O15244 555 aa14.02□□□□□ -0.17
SKA2-209ENST00000583976 FCMRO60667 390 aa14.02□□□□□ -0.17
SKA2-209ENST00000583976 OXSR1O95747 527 aaPredicted RBP14.02□□□□□ -0.17
SKA2-209ENST00000583976 THBDP07204 575 aa14.02□□□□□ -0.17
SKA2-209ENST00000583976 COX4I1P13073 169 aa14.02□□□□□ -0.17
SKA2-209ENST00000583976 HPGDP15428 266 aa14.02□□□□□ -0.17
SKA2-209ENST00000583976 CLK3P49761 638 aaKnown RBP14.02□□□□□ -0.17
SKA2-209ENST00000583976 ANXA11P50995 505 aaKnown RBP14.02□□□□□ -0.17
SKA2-209ENST00000583976 DSTNP60981 165 aa14.02□□□□□ -0.17
SKA2-209ENST00000583976 FUT5Q11128 374 aa14.02□□□□□ -0.17
SKA2-209ENST00000583976 GANABQ14697 944 aaKnown RBP14.02□□□□□ -0.17
SKA2-209ENST00000583976 RGNQ15493 299 aa14.02□□□□□ -0.17
SKA2-209ENST00000583976 SYPL1Q16563 259 aa14.02□□□□□ -0.17
SKA2-209ENST00000583976 ACKR1Q16570 336 aa14.02□□□□□ -0.17
SKA2-209ENST00000583976 GKAP1Q5VSY0 366 aaPredicted RBP14.02□□□□□ -0.17
SKA2-209ENST00000583976 HEPHL1Q6MZM0 1159 aa14.02□□□□□ -0.17
SKA2-209ENST00000583976 APOOLQ6UXV4 268 aa14.02□□□□□ -0.17
SKA2-209ENST00000583976 LRRC75A-AS1Q8N1F1 130 aa14.02□□□□□ -0.17
SKA2-209ENST00000583976 ZNF614Q8N883 585 aa14.02□□□□□ -0.17
SKA2-209ENST00000583976 ANKFN1Q8N957 763 aa14.02□□□□□ -0.17
SKA2-209ENST00000583976 ZNF610Q8N9Z0 462 aa14.02□□□□□ -0.17
SKA2-209ENST00000583976 GATSQ8NAP1 163 aa14.02□□□□□ -0.17
SKA2-209ENST00000583976 RP9Q8TA86 221 aaKnown RBP14.02□□□□□ -0.17
SKA2-209ENST00000583976 ROPN1LQ96C74 230 aa14.02□□□□□ -0.17
SKA2-209ENST00000583976 DTNBP1Q96EV8 351 aa14.02□□□□□ -0.17
SKA2-209ENST00000583976 CGREF1Q99674 301 aa14.02□□□□□ -0.17
SKA2-209ENST00000583976 KLHDC3Q9BQ90 382 aa14.02□□□□□ -0.17
SKA2-209ENST00000583976 TBL1XR1Q9BZK7 514 aa14.02□□□□□ -0.17
SKA2-209ENST00000583976 ZNF175Q9Y473 711 aa14.02□□□□□ -0.17
SKA2-209ENST00000583976 PRR14LQ5THK1 2151 aa14.02□□□□□ -0.17
SKA2-209ENST00000583976 FBN3Q75N90 2809 aa14.01□□□□□ -0.17
SKA2-209ENST00000583976 TRBV5-3A0A0A0MS03 114 aa14.01□□□□□ -0.17
SKA2-209ENST00000583976 EVPLLA8MZ36 301 aa14.01□□□□□ -0.17
SKA2-209ENST00000583976 ARHGEF9O43307 516 aa14.01□□□□□ -0.17
SKA2-209ENST00000583976 STX11O75558 287 aa14.01□□□□□ -0.17
SKA2-209ENST00000583976 AK1P00568 194 aa14.01□□□□□ -0.17
SKA2-209ENST00000583976 NUDT7P0C024 238 aa14.01□□□□□ -0.17
SKA2-209ENST00000583976 NR2F1P10589 423 aa14.01□□□□□ -0.17
SKA2-209ENST00000583976 TBXA2RP21731 343 aa14.01□□□□□ -0.17
SKA2-209ENST00000583976 MTPNP58546 118 aa14.01□□□□□ -0.17
SKA2-209ENST00000583976 EEF1A1P68104 462 aaKnown RBP14.01□□□□□ -0.17
SKA2-209ENST00000583976 RUNDC3AQ59EK9 446 aa14.01□□□□□ -0.17
SKA2-209ENST00000583976 EEF1A1P5Q5VTE0 462 aa14.01□□□□□ -0.17
SKA2-209ENST00000583976 HMGN2P46Q86SG4 172 aa14.01□□□□□ -0.17
SKA2-209ENST00000583976 METTL25Q8N6Q8 603 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms