RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 SCRG1O75711 98 aa2.32□□□□□ -2.04
COPS3-217ENST00000583160 AREGP15514 252 aa2.32□□□□□ -2.04
COPS3-217ENST00000583160 ZNF44P15621 663 aa2.32□□□□□ -2.04
COPS3-217ENST00000583160 ZNF18P17022 549 aa2.32□□□□□ -2.04
COPS3-217ENST00000583160 CD1BP29016 333 aa2.32□□□□□ -2.04
COPS3-217ENST00000583160 RPS10P46783 165 aaKnown RBP2.32□□□□□ -2.04
COPS3-217ENST00000583160 GYG1P46976 350 aa2.32□□□□□ -2.04
COPS3-217ENST00000583160 CCL11P51671 97 aa2.32□□□□□ -2.04
COPS3-217ENST00000583160 NUP107P57740 925 aa2.32□□□□□ -2.04
COPS3-217ENST00000583160 BTG3Q14201 252 aaPredicted RBP2.32□□□□□ -2.04
COPS3-217ENST00000583160 LRIT3Q3SXY7 679 aa2.32□□□□□ -2.04
COPS3-217ENST00000583160 FAM133BQ5BKY9 247 aaKnown RBP2.32□□□□□ -2.04
COPS3-217ENST00000583160 BEND6Q5SZJ8 279 aaPredicted RBP2.32□□□□□ -2.04
COPS3-217ENST00000583160 HACD2Q6Y1H2 254 aa2.32□□□□□ -2.04
COPS3-217ENST00000583160 AMZ2Q86W34 360 aa2.32□□□□□ -2.04
COPS3-217ENST00000583160 PEX5LQ8IYB4 626 aa2.32□□□□□ -2.04
COPS3-217ENST00000583160 C7orf33Q8WU49 177 aa2.32□□□□□ -2.04
COPS3-217ENST00000583160 ARNTL2Q8WYA1 636 aa2.32□□□□□ -2.04
COPS3-217ENST00000583160 TAF4BQ92750 862 aa2.32□□□□□ -2.04
COPS3-217ENST00000583160 TMEM101Q96IK0 257 aa2.32□□□□□ -2.04
COPS3-217ENST00000583160 SLC5A7Q9GZV3 580 aa2.32□□□□□ -2.04
COPS3-217ENST00000583160 TMEM245Q9H330 911 aa2.32□□□□□ -2.04
COPS3-217ENST00000583160 NXF3Q9H4D5 531 aaKnown RBP2.32□□□□□ -2.04
COPS3-217ENST00000583160 LCMT1Q9UIC8 334 aa2.32□□□□□ -2.04
COPS3-217ENST00000583160 ZNF223Q9UK11 482 aaPredicted RBP2.32□□□□□ -2.04
COPS3-217ENST00000583160 FZR1Q9UM11 496 aa2.32□□□□□ -2.04
COPS3-217ENST00000583160 PRG3Q9Y2Y8 225 aaPredicted RBP2.32□□□□□ -2.04
COPS3-217ENST00000583160 PARP14Q460N5 1801 aa2.32□□□□□ -2.04
COPS3-217ENST00000583160 A0A0G2JMZ2 1700 aa2.31□□□□□ -2.04
COPS3-217ENST00000583160 MUC3AQ02505 3323 aa2.31□□□□□ -2.04
COPS3-217ENST00000583160 MYH1P12882 1939 aa2.31□□□□□ -2.04
COPS3-217ENST00000583160 TRBV6-6A0A0A6YYG2 114 aa2.31□□□□□ -2.04
COPS3-217ENST00000583160 A0A0J9YXY3 114 aa2.31□□□□□ -2.04
COPS3-217ENST00000583160 CCDC69A6NI79 296 aa2.31□□□□□ -2.04
COPS3-217ENST00000583160 C19orf81C9J6K1 198 aa2.31□□□□□ -2.04
COPS3-217ENST00000583160 K7ENP7 123 aa2.31□□□□□ -2.04
COPS3-217ENST00000583160 ZNF324O75467 553 aaPredicted RBP2.31□□□□□ -2.04
COPS3-217ENST00000583160 OR8U8P0C7N1 319 aa2.31□□□□□ -2.04
COPS3-217ENST00000583160 VDAC1P21796 283 aa2.31□□□□□ -2.04
COPS3-217ENST00000583160 MARCKSP29966 332 aaPredicted RBP2.31□□□□□ -2.04
COPS3-217ENST00000583160 KIAA1024LP59773 190 aa2.31□□□□□ -2.04
COPS3-217ENST00000583160 PFN3P60673 137 aa2.31□□□□□ -2.04
COPS3-217ENST00000583160 DPYSL3Q14195 570 aa2.31□□□□□ -2.04
COPS3-217ENST00000583160 SLMAPQ14BN4 828 aa2.31□□□□□ -2.04
COPS3-217ENST00000583160 LRRC36Q1X8D7 754 aa2.31□□□□□ -2.04
COPS3-217ENST00000583160 SLC39A12Q504Y0 691 aa2.31□□□□□ -2.04
COPS3-217ENST00000583160 TEX44Q53QW1 395 aa2.31□□□□□ -2.04
COPS3-217ENST00000583160 PRAMEF7Q5VXH5 474 aa2.31□□□□□ -2.04
COPS3-217ENST00000583160 YRDCQ86U90 279 aaKnown RBP2.31□□□□□ -2.04
COPS3-217ENST00000583160 OR2A12Q8NGT7 310 aa2.31□□□□□ -2.04
COPS3-217ENST00000583160 MYDGFQ969H8 173 aa2.31□□□□□ -2.04
COPS3-217ENST00000583160 TADA1Q96BN2 335 aa2.31□□□□□ -2.04
COPS3-217ENST00000583160 CCDC51Q96ER9 411 aa2.31□□□□□ -2.04
COPS3-217ENST00000583160 C12orf42Q96LP6 360 aa2.31□□□□□ -2.04
COPS3-217ENST00000583160 NTN4Q9HB63 628 aa2.31□□□□□ -2.04
COPS3-217ENST00000583160 APMAPQ9HDC9 416 aa2.31□□□□□ -2.04
COPS3-217ENST00000583160 DUS2Q9NX74 493 aaKnown RBP2.31□□□□□ -2.04
COPS3-217ENST00000583160 TMOD2Q9NZR1 351 aa2.31□□□□□ -2.04
COPS3-217ENST00000583160 NDUFA13Q9P0J0 144 aa2.31□□□□□ -2.04
COPS3-217ENST00000583160 OR1A1Q9P1Q5 309 aa2.31□□□□□ -2.04
COPS3-217ENST00000583160 SPRR3Q9UBC9 169 aa2.31□□□□□ -2.04
COPS3-217ENST00000583160 SMC3Q9UQE7 1217 aa2.31□□□□□ -2.04
COPS3-217ENST00000583160 EXOSC1Q9Y3B2 195 aaKnown RBP2.31□□□□□ -2.04
COPS3-217ENST00000583160 LTBP2Q14767 1821 aa2.31□□□□□ -2.04
COPS3-217ENST00000583160 CDH23Q9H251 3354 aa2.3□□□□□ -2.04
COPS3-217ENST00000583160 TUBAL3A6NHL2 446 aa2.3□□□□□ -2.04
COPS3-217ENST00000583160 CCL5P13501 91 aa2.3□□□□□ -2.04
COPS3-217ENST00000583160 GLULP15104 373 aa2.3□□□□□ -2.04
COPS3-217ENST00000583160 HNRNPA2B1P22626 353 aaKnown RBP2.3□□□□□ -2.04
COPS3-217ENST00000583160 ADORA2BP29275 332 aa2.3□□□□□ -2.04
COPS3-217ENST00000583160 UGT1A5P35504 534 aa2.3□□□□□ -2.04
COPS3-217ENST00000583160 CNN1P51911 297 aaKnown RBP2.3□□□□□ -2.04
COPS3-217ENST00000583160 CASP9P55211 416 aa2.3□□□□□ -2.04
COPS3-217ENST00000583160 MRPS11P82912 194 aaKnown RBP2.3□□□□□ -2.04
COPS3-217ENST00000583160 GPNMBQ14956 572 aa2.3□□□□□ -2.04
COPS3-217ENST00000583160 AANATQ16613 207 aa2.3□□□□□ -2.04
COPS3-217ENST00000583160 ACSF3Q4G176 576 aaPredicted RBP2.3□□□□□ -2.04
COPS3-217ENST00000583160 TPRX1Q8N7U7 411 aa2.3□□□□□ -2.04
COPS3-217ENST00000583160 SUMF2Q8NBJ7 301 aa2.3□□□□□ -2.04
COPS3-217ENST00000583160 TMEM80Q96HE8 168 aa2.3□□□□□ -2.04
COPS3-217ENST00000583160 JAKMIP1Q96N16 626 aaKnown RBP2.3□□□□□ -2.04
COPS3-217ENST00000583160 API5Q9BZZ5 524 aaKnown RBP2.3□□□□□ -2.04
COPS3-217ENST00000583160 PSG11Q9UQ72 335 aa2.3□□□□□ -2.04
COPS3-217ENST00000583160 MROH7-TTC4A0A0A0MT08 1334 aa2.3□□□□□ -2.04
COPS3-217ENST00000583160 ZMYM6O95789 1325 aa2.3□□□□□ -2.04
COPS3-217ENST00000583160 ROBO3Q96MS0 1386 aa2.3□□□□□ -2.04
COPS3-217ENST00000583160 KIF26AQ9ULI4 1882 aaPredicted RBP2.3□□□□□ -2.04
COPS3-217ENST00000583160 A0A0C4DFX4 3053 aa2.3□□□□□ -2.04
COPS3-217ENST00000583160 VCANP13611 3396 aa2.29□□□□□ -2.04
COPS3-217ENST00000583160 UNC80Q8N2C7 3258 aa2.29□□□□□ -2.04
COPS3-217ENST00000583160 LAMA2P24043 3122 aaKnown RBP2.29□□□□□ -2.04
COPS3-217ENST00000583160 DNAH12Q6ZR08 3092 aa2.29□□□□□ -2.04
COPS3-217ENST00000583160 MYH7P12883 1935 aa2.29□□□□□ -2.04
COPS3-217ENST00000583160 MYH8P13535 1937 aa2.29□□□□□ -2.04
COPS3-217ENST00000583160 IGHV7-81A0A0B4J1V7 117 aa2.29□□□□□ -2.04
COPS3-217ENST00000583160 A0A1B0GUL7 405 aa2.29□□□□□ -2.04
COPS3-217ENST00000583160 SAGE2PA6NJ88 616 aa2.29□□□□□ -2.04
COPS3-217ENST00000583160 CCER2I3L3R5 266 aa2.29□□□□□ -2.04
COPS3-217ENST00000583160 IMPA2O14732 288 aa2.29□□□□□ -2.04
COPS3-217ENST00000583160 TM9SF1O15321 606 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms