RNA–Protein interactions for RNA: ENST00000582821.5

GGA3-215, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 1,018 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-215ENST00000582821 AQP8O94778 261 aa12.52□□□□□ -0.41
GGA3-215ENST00000582821 CGAP01215 116 aa12.52□□□□□ -0.41
GGA3-215ENST00000582821 OPN1LWP04000 364 aa12.52□□□□□ -0.41
GGA3-215ENST00000582821 HNRNPCL4P0DMR1 293 aa12.52□□□□□ -0.41
GGA3-215ENST00000582821 IL7RP16871 459 aa12.52□□□□□ -0.41
GGA3-215ENST00000582821 NCF2P19878 526 aaPredicted RBP12.52□□□□□ -0.41
GGA3-215ENST00000582821 PPIBP23284 216 aaKnown RBP12.52□□□□□ -0.41
GGA3-215ENST00000582821 CCR4P51679 360 aa12.52□□□□□ -0.41
GGA3-215ENST00000582821 CRISP3P54108 245 aa12.52□□□□□ -0.41
GGA3-215ENST00000582821 CARD18P57730 90 aa12.52□□□□□ -0.41
GGA3-215ENST00000582821 SORDQ00796 357 aa12.52□□□□□ -0.41
GGA3-215ENST00000582821 PLAURQ03405 335 aa12.52□□□□□ -0.41
GGA3-215ENST00000582821 SELENBP1Q13228 472 aa12.52□□□□□ -0.41
GGA3-215ENST00000582821 GNA13Q14344 377 aa12.52□□□□□ -0.41
GGA3-215ENST00000582821 ZSWIM7Q19AV6 140 aa12.52□□□□□ -0.41
GGA3-215ENST00000582821 TMEM176BQ3YBM2 270 aaPredicted RBP12.52□□□□□ -0.41
GGA3-215ENST00000582821 PAGE3Q5JUK9 113 aa12.52□□□□□ -0.41
GGA3-215ENST00000582821 PRAMEF8Q5VWM4 474 aa12.52□□□□□ -0.41
GGA3-215ENST00000582821 PRAMEF7Q5VXH5 474 aa12.52□□□□□ -0.41
GGA3-215ENST00000582821 HBMQ6B0K9 141 aa12.52□□□□□ -0.41
GGA3-215ENST00000582821 MSRB3Q8IXL7 192 aa12.52□□□□□ -0.41
GGA3-215ENST00000582821 PEX5LQ8IYB4 626 aa12.52□□□□□ -0.41
GGA3-215ENST00000582821 THOC1Q96FV9 657 aaKnown RBP12.52□□□□□ -0.41
GGA3-215ENST00000582821 QRSL1Q9H0R6 528 aaKnown RBP12.52□□□□□ -0.41
GGA3-215ENST00000582821 CCDC134Q9H6E4 229 aa12.52□□□□□ -0.41
GGA3-215ENST00000582821 BCL2L10Q9HD36 194 aa12.52□□□□□ -0.41
GGA3-215ENST00000582821 TIGARQ9NQ88 270 aa12.52□□□□□ -0.41
GGA3-215ENST00000582821 GLRX2Q9NS18 164 aa12.52□□□□□ -0.41
GGA3-215ENST00000582821 UQCRHLA0A096LP55 91 aa12.51□□□□□ -0.41
GGA3-215ENST00000582821 A0A0G2JND7 137 aa12.51□□□□□ -0.41
GGA3-215ENST00000582821 TMEM247A6NEH6 219 aa12.51□□□□□ -0.41
GGA3-215ENST00000582821 CLDN24A6NM45 220 aa12.51□□□□□ -0.41
GGA3-215ENST00000582821 EEF1E1-BLOC1S5C9J1V9 151 aa12.51□□□□□ -0.41
GGA3-215ENST00000582821 EEF1E1O43324 174 aaKnown RBP12.51□□□□□ -0.41
GGA3-215ENST00000582821 SYNGR4O95473 234 aa12.51□□□□□ -0.41
GGA3-215ENST00000582821 PABPC4LP0CB38 370 aaKnown RBP12.51□□□□□ -0.41
GGA3-215ENST00000582821 CD8BP10966 210 aa12.51□□□□□ -0.41
GGA3-215ENST00000582821 CD1EP15812 388 aa12.51□□□□□ -0.41
GGA3-215ENST00000582821 FKBP2P26885 142 aaKnown RBP12.51□□□□□ -0.41
GGA3-215ENST00000582821 SHC1P29353 583 aa12.51□□□□□ -0.41
GGA3-215ENST00000582821 SFTPDP35247 375 aa12.51□□□□□ -0.41
GGA3-215ENST00000582821 APOBEC1P41238 236 aaKnown RBP12.51□□□□□ -0.41
GGA3-215ENST00000582821 KIR2DL3P43628 341 aa12.51□□□□□ -0.41
GGA3-215ENST00000582821 TLE4Q04727 773 aa12.51□□□□□ -0.41
GGA3-215ENST00000582821 GTF2IRD2BQ6EKJ0 949 aa12.51□□□□□ -0.41
GGA3-215ENST00000582821 DLEU7Q6UYE1 221 aa12.51□□□□□ -0.41
GGA3-215ENST00000582821 PLEKHM3Q6ZWE6 761 aa12.51□□□□□ -0.41
GGA3-215ENST00000582821 FAM214BQ7L5A3 538 aa12.51□□□□□ -0.41
GGA3-215ENST00000582821 BTLAQ7Z6A9 289 aa12.51□□□□□ -0.41
GGA3-215ENST00000582821 GTF2IRD2Q86UP8 949 aa12.51□□□□□ -0.41
GGA3-215ENST00000582821 DPP10Q8N608 796 aa12.51□□□□□ -0.41
GGA3-215ENST00000582821 OR52P1PQ8NH57 321 aa12.51□□□□□ -0.41
GGA3-215ENST00000582821 FAM222BQ8WU58 562 aa12.51□□□□□ -0.41
GGA3-215ENST00000582821 WDR60Q8WVS4 1066 aa12.51□□□□□ -0.41
GGA3-215ENST00000582821 CNOT9Q92600 299 aaKnown RBP12.51□□□□□ -0.41
GGA3-215ENST00000582821 CPNE4Q96A23 557 aaPredicted RBP12.51□□□□□ -0.41
GGA3-215ENST00000582821 GMPPAQ96IJ6 420 aaPredicted RBP12.51□□□□□ -0.41
GGA3-215ENST00000582821 ZNF559Q9BR84 538 aa12.51□□□□□ -0.41
GGA3-215ENST00000582821 RBM24Q9BX46 236 aaKnown RBP12.51□□□□□ -0.41
GGA3-215ENST00000582821 PRRG4Q9BZD6 226 aa12.51□□□□□ -0.41
GGA3-215ENST00000582821 TMEM185BQ9H7F4 350 aa12.51□□□□□ -0.41
GGA3-215ENST00000582821 COQ10BQ9H8M1 238 aa12.51□□□□□ -0.41
GGA3-215ENST00000582821 A4GALTQ9NPC4 353 aa12.51□□□□□ -0.41
GGA3-215ENST00000582821 SERINC1Q9NRX5 453 aa12.51□□□□□ -0.41
GGA3-215ENST00000582821 MRGBPQ9NV56 204 aa12.51□□□□□ -0.41
GGA3-215ENST00000582821 DNAJB12Q9NXW2 375 aaKnown RBP12.51□□□□□ -0.41
GGA3-215ENST00000582821 VAPAQ9P0L0 249 aa12.51□□□□□ -0.41
GGA3-215ENST00000582821 CCDC168Q8NDH2 2452 aa12.51□□□□□ -0.41
GGA3-215ENST00000582821 MYO9AB2RTY4 2548 aa12.51□□□□□ -0.41
GGA3-215ENST00000582821 ANKRD17O75179 2603 aaKnown RBP12.5□□□□□ -0.41
GGA3-215ENST00000582821 FAM221AA4D161 298 aa12.5□□□□□ -0.41
GGA3-215ENST00000582821 ADAM11O75078 769 aa12.5□□□□□ -0.41
GGA3-215ENST00000582821 SS18L1O75177 396 aaPredicted RBP12.5□□□□□ -0.41
GGA3-215ENST00000582821 THBS1P07996 1170 aa12.5□□□□□ -0.41
GGA3-215ENST00000582821 TROVE2P10155 538 aaKnown RBP eCLIP12.5□□□□□ -0.41
GGA3-215ENST00000582821 GPX2P18283 190 aa12.5□□□□□ -0.41
GGA3-215ENST00000582821 RAC3P60763 192 aa12.5□□□□□ -0.41
GGA3-215ENST00000582821 MERTKQ12866 999 aa12.5□□□□□ -0.41
GGA3-215ENST00000582821 DAZAP2Q15038 168 aaPredicted RBP12.5□□□□□ -0.41
GGA3-215ENST00000582821 MRPL2Q5T653 305 aaKnown RBP12.5□□□□□ -0.41
GGA3-215ENST00000582821 C3orf33Q6P1S2 294 aa12.5□□□□□ -0.41
GGA3-215ENST00000582821 VWA1Q6PCB0 445 aa12.5□□□□□ -0.41
GGA3-215ENST00000582821 GRINAQ7Z429 371 aa12.5□□□□□ -0.41
GGA3-215ENST00000582821 HMGN2P46Q86SG4 172 aa12.5□□□□□ -0.41
GGA3-215ENST00000582821 LUZP2Q86TE4 346 aa12.5□□□□□ -0.41
GGA3-215ENST00000582821 ZNF440Q8IYI8 595 aa12.5□□□□□ -0.41
GGA3-215ENST00000582821 CNEP1R1Q8N9A8 125 aa12.5□□□□□ -0.41
GGA3-215ENST00000582821 SLC25A43Q8WUT9 341 aaPredicted RBP12.5□□□□□ -0.41
GGA3-215ENST00000582821 TMEM19Q96HH6 336 aa12.5□□□□□ -0.41
GGA3-215ENST00000582821 LURAP1Q96LR2 239 aa12.5□□□□□ -0.41
GGA3-215ENST00000582821 CCDC106Q9BWC9 280 aa12.5□□□□□ -0.41
GGA3-215ENST00000582821 GP6Q9HCN6 339 aa12.5□□□□□ -0.41
GGA3-215ENST00000582821 PLSCR4Q9NRQ2 329 aa12.5□□□□□ -0.41
GGA3-215ENST00000582821 LEF1Q9UJU2 399 aaPredicted RBP12.5□□□□□ -0.41
GGA3-215ENST00000582821 ZNF232Q9UNY5 417 aa12.5□□□□□ -0.41
GGA3-215ENST00000582821 CORO2BQ9UQ03 480 aa12.5□□□□□ -0.41
GGA3-215ENST00000582821 NDUFAF1Q9Y375 327 aa12.5□□□□□ -0.41
GGA3-215ENST00000582821 CDHR4A6H8M9 788 aa12.49□□□□□ -0.41
GGA3-215ENST00000582821 TUBAL3A6NHL2 446 aa12.49□□□□□ -0.41
GGA3-215ENST00000582821 BCHEP06276 602 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms