RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 RNF6Q9Y252 685 aa1.84□□□□□ -2.11
SMCHD1-206ENST00000581631 OARD1Q9Y530 152 aa1.84□□□□□ -2.11
SMCHD1-206ENST00000581631 UBE4BO95155 1302 aa1.84□□□□□ -2.12
SMCHD1-206ENST00000581631 CUX2O14529 1486 aa1.83□□□□□ -2.12
SMCHD1-206ENST00000581631 HELTA6NFD8 242 aa1.83□□□□□ -2.12
SMCHD1-206ENST00000581631 NBR2O15453 112 aa1.83□□□□□ -2.12
SMCHD1-206ENST00000581631 TOM1L1O75674 476 aa1.83□□□□□ -2.12
SMCHD1-206ENST00000581631 SLC25A27O95847 323 aa1.83□□□□□ -2.12
SMCHD1-206ENST00000581631 LALBAP00709 142 aa1.83□□□□□ -2.12
SMCHD1-206ENST00000581631 TGFAP01135 160 aa1.83□□□□□ -2.12
SMCHD1-206ENST00000581631 PCCBP05166 539 aa1.83□□□□□ -2.12
SMCHD1-206ENST00000581631 RNH1P13489 461 aaKnown RBP1.83□□□□□ -2.12
SMCHD1-206ENST00000581631 ETS1P14921 441 aa1.83□□□□□ -2.12
SMCHD1-206ENST00000581631 CALB2P22676 271 aa1.83□□□□□ -2.12
SMCHD1-206ENST00000581631 DPP4P27487 766 aa1.83□□□□□ -2.12
SMCHD1-206ENST00000581631 OAS2P29728 719 aaKnown RBP1.83□□□□□ -2.12
SMCHD1-206ENST00000581631 PLK1P53350 603 aa1.83□□□□□ -2.12
SMCHD1-206ENST00000581631 SH3BGRP55822 239 aaPredicted RBP1.83□□□□□ -2.12
SMCHD1-206ENST00000581631 CHRNB3Q05901 458 aa1.83□□□□□ -2.12
SMCHD1-206ENST00000581631 GAMTQ14353 236 aa1.83□□□□□ -2.12
SMCHD1-206ENST00000581631 MAPK6Q16659 721 aa1.83□□□□□ -2.12
SMCHD1-206ENST00000581631 FAHD2BQ6P2I3 314 aaPredicted RBP1.83□□□□□ -2.12
SMCHD1-206ENST00000581631 RFLNAQ6ZTI6 216 aa1.83□□□□□ -2.12
SMCHD1-206ENST00000581631 ELMOD2Q8IZ81 293 aa1.83□□□□□ -2.12
SMCHD1-206ENST00000581631 KDM8Q8N371 416 aa1.83□□□□□ -2.12
SMCHD1-206ENST00000581631 PNKDQ8N490 385 aa1.83□□□□□ -2.12
SMCHD1-206ENST00000581631 BCORP1Q8N888 145 aa1.83□□□□□ -2.12
SMCHD1-206ENST00000581631 OR5AU1Q8NGC0 362 aa1.83□□□□□ -2.12
SMCHD1-206ENST00000581631 AENQ8WTP8 325 aaKnown RBP1.83□□□□□ -2.12
SMCHD1-206ENST00000581631 FAHD2AQ96GK7 314 aa1.83□□□□□ -2.12
SMCHD1-206ENST00000581631 TESK2Q96S53 571 aa1.83□□□□□ -2.12
SMCHD1-206ENST00000581631 GAL3ST1Q99999 423 aa1.83□□□□□ -2.12
SMCHD1-206ENST00000581631 SLC25A22Q9H936 323 aa1.83□□□□□ -2.12
SMCHD1-206ENST00000581631 AGPAT5Q9NUQ2 364 aa1.83□□□□□ -2.12
SMCHD1-206ENST00000581631 SOHLH2Q9NX45 425 aa1.83□□□□□ -2.12
SMCHD1-206ENST00000581631 TREM2Q9NZC2 230 aa1.83□□□□□ -2.12
SMCHD1-206ENST00000581631 WARS2Q9UGM6 360 aaKnown RBP1.83□□□□□ -2.12
SMCHD1-206ENST00000581631 IGLV4-60A0A075B6I1 120 aa1.82□□□□□ -2.12
SMCHD1-206ENST00000581631 A0A096LNJ9 63 aa1.82□□□□□ -2.12
SMCHD1-206ENST00000581631 IGHV3-64DA0A0J9YX35 117 aa1.82□□□□□ -2.12
SMCHD1-206ENST00000581631 ESYT2A0FGR8 921 aa1.82□□□□□ -2.12
SMCHD1-206ENST00000581631 PES1O00541 588 aaKnown RBP1.82□□□□□ -2.12
SMCHD1-206ENST00000581631 TNFSF13O75888 250 aa1.82□□□□□ -2.12
SMCHD1-206ENST00000581631 KIAA0754O94854 1291 aa1.82□□□□□ -2.12
SMCHD1-206ENST00000581631 GNA14O95837 355 aa1.82□□□□□ -2.12
SMCHD1-206ENST00000581631 MOSP00540 346 aa1.82□□□□□ -2.12
SMCHD1-206ENST00000581631 ZNF823P16415 610 aa1.82□□□□□ -2.12
SMCHD1-206ENST00000581631 PAICSP22234 425 aaKnown RBP1.82□□□□□ -2.12
SMCHD1-206ENST00000581631 PTGFRP43088 359 aa1.82□□□□□ -2.12
SMCHD1-206ENST00000581631 RIPPLY1Q0D2K3 151 aa1.82□□□□□ -2.12
SMCHD1-206ENST00000581631 RAB40BQ12829 278 aa1.82□□□□□ -2.12
SMCHD1-206ENST00000581631 PPP2R5CQ13362 524 aa1.82□□□□□ -2.12
SMCHD1-206ENST00000581631 CASC10Q5T4H9 136 aa1.82□□□□□ -2.12
SMCHD1-206ENST00000581631 OR52W1Q6IF63 320 aa1.82□□□□□ -2.12
SMCHD1-206ENST00000581631 LHFPL4Q7Z7J7 247 aa1.82□□□□□ -2.12
SMCHD1-206ENST00000581631 CBWD2Q8IUF1 395 aa1.82□□□□□ -2.12
SMCHD1-206ENST00000581631 OR51G2Q8NGK0 314 aa1.82□□□□□ -2.12
SMCHD1-206ENST00000581631 NANPQ8TBE9 248 aa1.82□□□□□ -2.12
SMCHD1-206ENST00000581631 MGARPQ8TDB4 240 aa1.82□□□□□ -2.12
SMCHD1-206ENST00000581631 CHCHD10Q8WYQ3 142 aaPredicted RBP1.82□□□□□ -2.12
SMCHD1-206ENST00000581631 FAM210BQ96KR6 192 aa1.82□□□□□ -2.12
SMCHD1-206ENST00000581631 SAMD8Q96LT4 415 aa1.82□□□□□ -2.12
SMCHD1-206ENST00000581631 KCNA7Q96RP8 456 aa1.82□□□□□ -2.12
SMCHD1-206ENST00000581631 TSG101Q99816 390 aa1.82□□□□□ -2.12
SMCHD1-206ENST00000581631 SPATA16Q9BXB7 569 aa1.82□□□□□ -2.12
SMCHD1-206ENST00000581631 GSDMCQ9BYG8 508 aa1.82□□□□□ -2.12
SMCHD1-206ENST00000581631 RAB17Q9H0T7 212 aa1.82□□□□□ -2.12
SMCHD1-206ENST00000581631 PLGRKTQ9HBL7 147 aa1.82□□□□□ -2.12
SMCHD1-206ENST00000581631 C6orf203Q9P0P8 240 aaPredicted RBP1.82□□□□□ -2.12
SMCHD1-206ENST00000581631 PHF11Q9UIL8 331 aa1.82□□□□□ -2.12
SMCHD1-206ENST00000581631 ASF1AQ9Y294 204 aa1.82□□□□□ -2.12
SMCHD1-206ENST00000581631 SPACA6W5XKT8 324 aa1.82□□□□□ -2.12
SMCHD1-206ENST00000581631 SPAG9O60271 1321 aaKnown RBP1.82□□□□□ -2.12
SMCHD1-206ENST00000581631 A0A0U1RQV5 110 aa1.81□□□□□ -2.12
SMCHD1-206ENST00000581631 SDHDO14521 159 aa1.81□□□□□ -2.12
SMCHD1-206ENST00000581631 ECI2O75521 394 aa1.81□□□□□ -2.12
SMCHD1-206ENST00000581631 MED6O75586 246 aa1.81□□□□□ -2.12
SMCHD1-206ENST00000581631 OPN1LWP04000 364 aa1.81□□□□□ -2.12
SMCHD1-206ENST00000581631 IGF1P05019 195 aa1.81□□□□□ -2.12
SMCHD1-206ENST00000581631 GIPP09681 153 aaPredicted RBP1.81□□□□□ -2.12
SMCHD1-206ENST00000581631 RBMY1CP0DJD4 496 aa1.81□□□□□ -2.12
SMCHD1-206ENST00000581631 FUT1P19526 365 aa1.81□□□□□ -2.12
SMCHD1-206ENST00000581631 CD80P33681 288 aa1.81□□□□□ -2.12
SMCHD1-206ENST00000581631 LONP1P36776 959 aaKnown RBP1.81□□□□□ -2.12
SMCHD1-206ENST00000581631 RPS9P46781 194 aaKnown RBP1.81□□□□□ -2.12
SMCHD1-206ENST00000581631 NAPAP54920 295 aa1.81□□□□□ -2.12
SMCHD1-206ENST00000581631 BIDP55957 195 aa1.81□□□□□ -2.12
SMCHD1-206ENST00000581631 ACTA1P68133 377 aa1.81□□□□□ -2.12
SMCHD1-206ENST00000581631 SPP2Q13103 211 aa1.81□□□□□ -2.12
SMCHD1-206ENST00000581631 TRIP10Q15642 601 aa1.81□□□□□ -2.12
SMCHD1-206ENST00000581631 SLC5A12Q1EHB4 618 aa1.81□□□□□ -2.12
SMCHD1-206ENST00000581631 LINC01620Q4KN68 170 aa1.81□□□□□ -2.12
SMCHD1-206ENST00000581631 SLC10A5Q5PT55 438 aa1.81□□□□□ -2.12
SMCHD1-206ENST00000581631 UNC5DQ6UXZ4 953 aa1.81□□□□□ -2.12
SMCHD1-206ENST00000581631 ACOT7LQ6ZUV0 252 aa1.81□□□□□ -2.12
SMCHD1-206ENST00000581631 COX15Q7KZN9 410 aa1.81□□□□□ -2.12
SMCHD1-206ENST00000581631 TMEM17Q86X19 198 aa1.81□□□□□ -2.12
SMCHD1-206ENST00000581631 SAXO1Q8IYX7 474 aa1.81□□□□□ -2.12
SMCHD1-206ENST00000581631 C15orf54Q8N8G6 183 aa1.81□□□□□ -2.12
SMCHD1-206ENST00000581631 NKAPP1Q8N9T2 125 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms