RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 CLEC4AQ9UMR7 237 aa18.69■□□□□ 0.58
CCDC42-203ENST00000581598 CARD8Q9Y2G2 431 aa18.69■□□□□ 0.58
CCDC42-203ENST00000581598 NPIPA5A0A0B4J1W7 369 aa18.68■□□□□ 0.58
CCDC42-203ENST00000581598 NPIPA7E9PJI5 369 aa18.68■□□□□ 0.58
CCDC42-203ENST00000581598 OIP5O43482 229 aa18.68■□□□□ 0.58
CCDC42-203ENST00000581598 EFNA2O43921 213 aa18.68■□□□□ 0.58
CCDC42-203ENST00000581598 NTN1O95631 604 aa18.68■□□□□ 0.58
CCDC42-203ENST00000581598 NPIPA8P0DM63 369 aa18.68■□□□□ 0.58
CCDC42-203ENST00000581598 FPR1P21462 350 aa18.68■□□□□ 0.58
CCDC42-203ENST00000581598 AGTR1P30556 359 aa18.68■□□□□ 0.58
CCDC42-203ENST00000581598 ZNF239Q16600 458 aaKnown RBP18.68■□□□□ 0.58
CCDC42-203ENST00000581598 STAC2Q6ZMT1 411 aa18.68■□□□□ 0.58
CCDC42-203ENST00000581598 C22orf34Q6ZV56 151 aa18.68■□□□□ 0.58
CCDC42-203ENST00000581598 WFDC11Q8NEX6 87 aa18.68■□□□□ 0.58
CCDC42-203ENST00000581598 OR5AK3PQ8NH89 298 aa18.68■□□□□ 0.58
CCDC42-203ENST00000581598 FBXO27Q8NI29 283 aa18.68■□□□□ 0.58
CCDC42-203ENST00000581598 RNF128Q8TEB7 428 aa18.68■□□□□ 0.58
CCDC42-203ENST00000581598 MRGPRX4Q96LA9 322 aa18.68■□□□□ 0.58
CCDC42-203ENST00000581598 LRRC37BQ96QE4 947 aa18.68■□□□□ 0.58
CCDC42-203ENST00000581598 CCDC106Q9BWC9 280 aa18.68■□□□□ 0.58
CCDC42-203ENST00000581598 KLHL4Q9C0H6 718 aa18.68■□□□□ 0.58
CCDC42-203ENST00000581598 ARID1AO14497 2285 aa18.68■□□□□ 0.58
CCDC42-203ENST00000581598 GTPBP1O00178 669 aaKnown RBP18.67■□□□□ 0.58
CCDC42-203ENST00000581598 DNAJA2O60884 412 aa18.67■□□□□ 0.58
CCDC42-203ENST00000581598 SCN2BO60939 215 aa18.67■□□□□ 0.58
CCDC42-203ENST00000581598 NUDT14O95848 222 aa18.67■□□□□ 0.58
CCDC42-203ENST00000581598 GUSBP08236 651 aa18.67■□□□□ 0.58
CCDC42-203ENST00000581598 PRKCAP17252 672 aa18.67■□□□□ 0.58
CCDC42-203ENST00000581598 MATN1P21941 496 aa18.67■□□□□ 0.58
CCDC42-203ENST00000581598 SHC1P29353 583 aa18.67■□□□□ 0.58
CCDC42-203ENST00000581598 SOAT1P35610 550 aa18.67■□□□□ 0.58
CCDC42-203ENST00000581598 UFM1P61960 85 aa18.67■□□□□ 0.58
CCDC42-203ENST00000581598 RNPS1Q15287 305 aaKnown RBP18.67■□□□□ 0.58
CCDC42-203ENST00000581598 ACKR1Q16570 336 aa18.67■□□□□ 0.58
CCDC42-203ENST00000581598 EXOC3L2Q2M3D2 409 aa18.67■□□□□ 0.58
CCDC42-203ENST00000581598 PGS1Q32NB8 556 aa18.67■□□□□ 0.58
CCDC42-203ENST00000581598 OR4F3Q6IEY1 312 aa18.67■□□□□ 0.58
CCDC42-203ENST00000581598 C20orf204Q6ZNR8 217 aa18.67■□□□□ 0.58
CCDC42-203ENST00000581598 C6orf120Q7Z4R8 191 aa18.67■□□□□ 0.58
CCDC42-203ENST00000581598 STK32CQ86UX6 486 aa18.67■□□□□ 0.58
CCDC42-203ENST00000581598 CLECL1Q8IZS7 167 aa18.67■□□□□ 0.58
CCDC42-203ENST00000581598 OR5D16Q8NGK9 328 aa18.67■□□□□ 0.58
CCDC42-203ENST00000581598 MIPOL1Q8TD10 442 aa18.67■□□□□ 0.58
CCDC42-203ENST00000581598 OIT3Q8WWZ8 545 aa18.67■□□□□ 0.58
CCDC42-203ENST00000581598 TEX37Q96LM6 180 aa18.67■□□□□ 0.58
CCDC42-203ENST00000581598 SERHL2Q9H4I8 314 aa18.67■□□□□ 0.58
CCDC42-203ENST00000581598 GPR52Q9Y2T5 361 aa18.67■□□□□ 0.58
CCDC42-203ENST00000581598 CAPN7Q9Y6W3 813 aa18.67■□□□□ 0.58
CCDC42-203ENST00000581598 DSCAMO60469 2012 aa18.67■□□□□ 0.58
CCDC42-203ENST00000581598 ZNF264O43296 627 aa18.66■□□□□ 0.58
CCDC42-203ENST00000581598 STX11O75558 287 aa18.66■□□□□ 0.58
CCDC42-203ENST00000581598 SLC22A3O75751 556 aa18.66■□□□□ 0.58
CCDC42-203ENST00000581598 THBDP07204 575 aa18.66■□□□□ 0.58
CCDC42-203ENST00000581598 PSMB1P20618 241 aaKnown RBP18.66■□□□□ 0.58
CCDC42-203ENST00000581598 IL12AP29459 219 aa18.66■□□□□ 0.58
CCDC42-203ENST00000581598 SFTPDP35247 375 aa18.66■□□□□ 0.58
CCDC42-203ENST00000581598 CLNS1AP54105 237 aaKnown RBP18.66■□□□□ 0.58
CCDC42-203ENST00000581598 NKX6-1P78426 367 aaPredicted RBP18.66■□□□□ 0.58
CCDC42-203ENST00000581598 KLF10Q13118 480 aa18.66■□□□□ 0.58
CCDC42-203ENST00000581598 SELENBP1Q13228 472 aa18.66■□□□□ 0.58
CCDC42-203ENST00000581598 ZNF141Q15928 474 aa18.66■□□□□ 0.58
CCDC42-203ENST00000581598 ARHGAP11BQ3KRB8 267 aa18.66■□□□□ 0.58
CCDC42-203ENST00000581598 AP1ARQ63HQ0 302 aa18.66■□□□□ 0.58
CCDC42-203ENST00000581598 FUNDC1Q8IVP5 155 aa18.66■□□□□ 0.58
CCDC42-203ENST00000581598 GLB1L3Q8NCI6 653 aaPredicted RBP18.66■□□□□ 0.58
CCDC42-203ENST00000581598 OR9I1Q8NGQ6 314 aa18.66■□□□□ 0.58
CCDC42-203ENST00000581598 OR5W2Q8NH69 310 aa18.66■□□□□ 0.58
CCDC42-203ENST00000581598 TESCQ96BS2 214 aa18.66■□□□□ 0.58
CCDC42-203ENST00000581598 REXO5Q96IC2 774 aaKnown RBP18.66■□□□□ 0.58
CCDC42-203ENST00000581598 SLC35G5Q96KT7 338 aa18.66■□□□□ 0.58
CCDC42-203ENST00000581598 DPY30Q9C005 99 aa18.66■□□□□ 0.58
CCDC42-203ENST00000581598 COQ10BQ9H8M1 238 aa18.66■□□□□ 0.58
CCDC42-203ENST00000581598 ARMCX1Q9P291 453 aa18.66■□□□□ 0.58
CCDC42-203ENST00000581598 RNF103-CHMP3A0A140T963 221 aa18.65■□□□□ 0.58
CCDC42-203ENST00000581598 SERINC4A6NH21 518 aa18.65■□□□□ 0.58
CCDC42-203ENST00000581598 ARHGEF9O43307 516 aa18.65■□□□□ 0.58
CCDC42-203ENST00000581598 KLF4O43474 513 aa18.65■□□□□ 0.58
CCDC42-203ENST00000581598 AGR2O95994 175 aa18.65■□□□□ 0.58
CCDC42-203ENST00000581598 UBL4AP11441 157 aa18.65■□□□□ 0.58
CCDC42-203ENST00000581598 NME5P56597 212 aa18.65■□□□□ 0.58
CCDC42-203ENST00000581598 CBFBQ13951 182 aa18.65■□□□□ 0.58
CCDC42-203ENST00000581598 TOMM34Q15785 309 aaPredicted RBP18.65■□□□□ 0.58
CCDC42-203ENST00000581598 DPY19L1Q2PZI1 675 aa18.65■□□□□ 0.58
CCDC42-203ENST00000581598 BEX5Q5H9J7 111 aa18.65■□□□□ 0.58
CCDC42-203ENST00000581598 ANXA8L1Q5VT79 327 aa18.65■□□□□ 0.58
CCDC42-203ENST00000581598 ANKRD34AQ69YU3 496 aa18.65■□□□□ 0.58
CCDC42-203ENST00000581598 HEPHL1Q6MZM0 1159 aa18.65■□□□□ 0.58
CCDC42-203ENST00000581598 FITM2Q8N6M3 262 aa18.65■□□□□ 0.58
CCDC42-203ENST00000581598 ZNF614Q8N883 585 aa18.65■□□□□ 0.58
CCDC42-203ENST00000581598 ZFP90Q8TF47 636 aa18.65■□□□□ 0.58
CCDC42-203ENST00000581598 ROBO4Q8WZ75 1007 aa18.65■□□□□ 0.58
CCDC42-203ENST00000581598 ZC3HAV1LQ96H79 300 aaKnown RBP18.65■□□□□ 0.58
CCDC42-203ENST00000581598 HS3ST6Q96QI5 342 aa18.65■□□□□ 0.58
CCDC42-203ENST00000581598 TACO1Q9BSH4 297 aaKnown RBP18.65■□□□□ 0.58
CCDC42-203ENST00000581598 SRXN1Q9BYN0 137 aa18.65■□□□□ 0.58
CCDC42-203ENST00000581598 ZNF350Q9GZX5 532 aa18.65■□□□□ 0.58
CCDC42-203ENST00000581598 LAT2Q9GZY6 243 aa18.65■□□□□ 0.58
CCDC42-203ENST00000581598 KLHL13Q9P2N7 655 aa18.65■□□□□ 0.58
CCDC42-203ENST00000581598 PCDHGB4Q9UN71 923 aa18.65■□□□□ 0.58
CCDC42-203ENST00000581598 FREM1Q5H8C1 2179 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms