RNA–Protein interactions for RNA: ENST00000580584.1

PMP22-208, Transcript of peripheral myelin protein 22, human

TSL 3

Gene PMP22, Length 428 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PMP22-208	ENST00000580584	SLC35A3	Q9Y2D2	325 aa		13.86	□□□□□ -0.19
PMP22-208	ENST00000580584	PCNX3	Q9H6A9	2034 aa		13.86	□□□□□ -0.19
PMP22-208	ENST00000580584		A0A1W2PPR1	153 aa		13.85	□□□□□ -0.19
PMP22-208	ENST00000580584	C16orf97	H3BN30	126 aa		13.85	□□□□□ -0.19
PMP22-208	ENST00000580584	CASK	O14936	926 aa		13.85	□□□□□ -0.19
PMP22-208	ENST00000580584	ADAM11	O75078	769 aa		13.85	□□□□□ -0.19
PMP22-208	ENST00000580584	PGC	P20142	388 aa		13.85	□□□□□ -0.19
PMP22-208	ENST00000580584	KLK2	P20151	261 aa		13.85	□□□□□ -0.19
PMP22-208	ENST00000580584	SLC7A1	P30825	629 aa		13.85	□□□□□ -0.19
PMP22-208	ENST00000580584	POLR2J	P52435	117 aa	Known RBP	13.85	□□□□□ -0.19
PMP22-208	ENST00000580584	MERTK	Q12866	999 aa		13.85	□□□□□ -0.19
PMP22-208	ENST00000580584	ANKRD34A	Q69YU3	496 aa		13.85	□□□□□ -0.19
PMP22-208	ENST00000580584	C3orf33	Q6P1S2	294 aa		13.85	□□□□□ -0.19
PMP22-208	ENST00000580584	MIER2	Q8N344	545 aa		13.85	□□□□□ -0.19
PMP22-208	ENST00000580584	ST8SIA1	Q92185	356 aa		13.85	□□□□□ -0.19
PMP22-208	ENST00000580584	AURKB	Q96GD4	344 aa	Predicted RBP	13.85	□□□□□ -0.19
PMP22-208	ENST00000580584	ZC3HAV1L	Q96H79	300 aa	Known RBP	13.85	□□□□□ -0.19
PMP22-208	ENST00000580584	REXO5	Q96IC2	774 aa	Known RBP	13.85	□□□□□ -0.19
PMP22-208	ENST00000580584	TRNT1	Q96Q11	434 aa	Known RBP	13.85	□□□□□ -0.19
PMP22-208	ENST00000580584	OR5B2	Q96R09	309 aa		13.85	□□□□□ -0.19
PMP22-208	ENST00000580584	EBF4	Q9BQW3	602 aa		13.85	□□□□□ -0.19
PMP22-208	ENST00000580584	KLHL4	Q9C0H6	718 aa		13.85	□□□□□ -0.19
PMP22-208	ENST00000580584	TIGAR	Q9NQ88	270 aa		13.85	□□□□□ -0.19
PMP22-208	ENST00000580584	PLSCR4	Q9NRQ2	329 aa		13.85	□□□□□ -0.19
PMP22-208	ENST00000580584	GLRX2	Q9NS18	164 aa		13.85	□□□□□ -0.19
PMP22-208	ENST00000580584	ACER3	Q9NUN7	267 aa		13.85	□□□□□ -0.19
PMP22-208	ENST00000580584	HIVEP1	P15822	2718 aa		13.85	□□□□□ -0.19
PMP22-208	ENST00000580584	MED12L	Q86YW9	2145 aa		13.84	□□□□□ -0.19
PMP22-208	ENST00000580584	AP3D1	O14617	1153 aa		13.84	□□□□□ -0.19
PMP22-208	ENST00000580584	SIAH2	O43255	324 aa		13.84	□□□□□ -0.19
PMP22-208	ENST00000580584	ANP32D	O95626	131 aa		13.84	□□□□□ -0.19
PMP22-208	ENST00000580584	KRT75	O95678	551 aa		13.84	□□□□□ -0.19
PMP22-208	ENST00000580584	NR2F1	P10589	423 aa		13.84	□□□□□ -0.19
PMP22-208	ENST00000580584	ETFA	P13804	333 aa		13.84	□□□□□ -0.19
PMP22-208	ENST00000580584	ENPP1	P22413	925 aa		13.84	□□□□□ -0.19
PMP22-208	ENST00000580584	PCYT1A	P49585	367 aa		13.84	□□□□□ -0.19
PMP22-208	ENST00000580584	IDH3A	P50213	366 aa		13.84	□□□□□ -0.19
PMP22-208	ENST00000580584	ANXA11	P50995	505 aa	Known RBP	13.84	□□□□□ -0.19
PMP22-208	ENST00000580584	MVD	P53602	400 aa		13.84	□□□□□ -0.19
PMP22-208	ENST00000580584	KCNJ10	P78508	379 aa		13.84	□□□□□ -0.19
PMP22-208	ENST00000580584	MAPK11	Q15759	364 aa		13.84	□□□□□ -0.19
PMP22-208	ENST00000580584	C6orf10	Q5SRN2	563 aa		13.84	□□□□□ -0.19
PMP22-208	ENST00000580584	PAMR1	Q6UXH9	720 aa		13.84	□□□□□ -0.19
PMP22-208	ENST00000580584	SPNS3	Q6ZMD2	512 aa		13.84	□□□□□ -0.19
PMP22-208	ENST00000580584	C22orf34	Q6ZV56	151 aa		13.84	□□□□□ -0.19
PMP22-208	ENST00000580584	PLEKHM3	Q6ZWE6	761 aa		13.84	□□□□□ -0.19
PMP22-208	ENST00000580584	FCRLA	Q7L513	359 aa		13.84	□□□□□ -0.19
PMP22-208	ENST00000580584	ARFGAP2	Q8N6H7	521 aa		13.84	□□□□□ -0.19
PMP22-208	ENST00000580584	ZNF563	Q8TA94	476 aa		13.84	□□□□□ -0.19
PMP22-208	ENST00000580584	DYDC1	Q8WWB3	177 aa		13.84	□□□□□ -0.19
PMP22-208	ENST00000580584	OIT3	Q8WWZ8	545 aa		13.84	□□□□□ -0.19
PMP22-208	ENST00000580584	CNOT9	Q92600	299 aa	Known RBP	13.84	□□□□□ -0.19
PMP22-208	ENST00000580584	NINJ1	Q92982	152 aa		13.84	□□□□□ -0.19
PMP22-208	ENST00000580584	DNAJA3	Q96EY1	480 aa		13.84	□□□□□ -0.19
PMP22-208	ENST00000580584	ITCH	Q96J02	903 aa		13.84	□□□□□ -0.19
PMP22-208	ENST00000580584	PLEKHF2	Q9H8W4	249 aa		13.84	□□□□□ -0.19
PMP22-208	ENST00000580584	TCF7L2	Q9NQB0	619 aa		13.84	□□□□□ -0.19
PMP22-208	ENST00000580584	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	13.84	□□□□□ -0.19
PMP22-208	ENST00000580584	KLHL13	Q9P2N7	655 aa		13.84	□□□□□ -0.19
PMP22-208	ENST00000580584	LIPT1	Q9Y234	373 aa		13.84	□□□□□ -0.19
PMP22-208	ENST00000580584	TEP1	Q99973	2627 aa	Known RBP	13.84	□□□□□ -0.19
PMP22-208	ENST00000580584	FAM234B	A2RU67	622 aa		13.83	□□□□□ -0.2
PMP22-208	ENST00000580584	AGAP5	A6NIR3	686 aa		13.83	□□□□□ -0.2
PMP22-208	ENST00000580584	DEFB108A	A8MXU0	73 aa		13.83	□□□□□ -0.2
PMP22-208	ENST00000580584	POLR3G	O15318	223 aa	Predicted RBP	13.83	□□□□□ -0.2
PMP22-208	ENST00000580584	GOSR1	O95249	250 aa		13.83	□□□□□ -0.2
PMP22-208	ENST00000580584	CRAT	P43155	626 aa		13.83	□□□□□ -0.2
PMP22-208	ENST00000580584	TXNL4A	P83876	142 aa	Known RBP	13.83	□□□□□ -0.2
PMP22-208	ENST00000580584	RNPS1	Q15287	305 aa	Known RBP	13.83	□□□□□ -0.2
PMP22-208	ENST00000580584	AP1AR	Q63HQ0	302 aa		13.83	□□□□□ -0.2
PMP22-208	ENST00000580584	SLC2A7	Q6PXP3	512 aa		13.83	□□□□□ -0.2
PMP22-208	ENST00000580584	LRRC74B	Q6ZQY2	392 aa		13.83	□□□□□ -0.2
PMP22-208	ENST00000580584	HDX	Q7Z353	690 aa		13.83	□□□□□ -0.2
PMP22-208	ENST00000580584	NUFIP2	Q7Z417	695 aa	Known RBP	13.83	□□□□□ -0.2
PMP22-208	ENST00000580584	TUSC5	Q8IXB3	177 aa		13.83	□□□□□ -0.2
PMP22-208	ENST00000580584	GOLGA6L1	Q8N7Z2	621 aa		13.83	□□□□□ -0.2
PMP22-208	ENST00000580584	TMEM234	Q8WY98	164 aa		13.83	□□□□□ -0.2
PMP22-208	ENST00000580584	CCDC106	Q9BWC9	280 aa		13.83	□□□□□ -0.2
PMP22-208	ENST00000580584	RMND5A	Q9H871	391 aa		13.83	□□□□□ -0.2
PMP22-208	ENST00000580584	EXOSC3	Q9NQT5	275 aa	Known RBP	13.83	□□□□□ -0.2
PMP22-208	ENST00000580584	CTPS2	Q9NRF8	586 aa		13.83	□□□□□ -0.2
PMP22-208	ENST00000580584	SERINC1	Q9NRX5	453 aa		13.83	□□□□□ -0.2
PMP22-208	ENST00000580584	P2RX2	Q9UBL9	471 aa		13.83	□□□□□ -0.2
PMP22-208	ENST00000580584	SPG11	Q96JI7	2443 aa		13.82	□□□□□ -0.2
PMP22-208	ENST00000580584	HMGB1P1	B2RPK0	211 aa	Predicted RBP	13.82	□□□□□ -0.2
PMP22-208	ENST00000580584	SMAD9	O15198	467 aa	Known RBP	13.82	□□□□□ -0.2
PMP22-208	ENST00000580584	BCHE	P06276	602 aa		13.82	□□□□□ -0.2
PMP22-208	ENST00000580584	PABPC4L	P0CB38	370 aa	Known RBP	13.82	□□□□□ -0.2
PMP22-208	ENST00000580584	H2AFX	P16104	143 aa	Predicted RBP	13.82	□□□□□ -0.2
PMP22-208	ENST00000580584	RPS4Y1	P22090	263 aa	Known RBP	13.82	□□□□□ -0.2
PMP22-208	ENST00000580584	CRYGS	P22914	178 aa		13.82	□□□□□ -0.2
PMP22-208	ENST00000580584	DNASE1	P24855	282 aa		13.82	□□□□□ -0.2
PMP22-208	ENST00000580584	AQP5	P55064	265 aa		13.82	□□□□□ -0.2
PMP22-208	ENST00000580584	RAC3	P60763	192 aa		13.82	□□□□□ -0.2
PMP22-208	ENST00000580584	STX1B	P61266	288 aa		13.82	□□□□□ -0.2
PMP22-208	ENST00000580584	SYT14P1	Q58G82	188 aa		13.82	□□□□□ -0.2
PMP22-208	ENST00000580584	TMEM201	Q5SNT2	666 aa		13.82	□□□□□ -0.2
PMP22-208	ENST00000580584	GTF2IRD2B	Q6EKJ0	949 aa		13.82	□□□□□ -0.2
PMP22-208	ENST00000580584	STAC2	Q6ZMT1	411 aa		13.82	□□□□□ -0.2
PMP22-208	ENST00000580584	MSANTD1	Q6ZTZ1	278 aa		13.82	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms