RNA–Protein interactions for RNA: ENST00000578240.1

CTC1-203, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-203ENST00000578240 GPR4P46093 362 aa11.96□□□□□ -0.5
CTC1-203ENST00000578240 CTU2Q2VPK5 515 aaKnown RBP11.96□□□□□ -0.5
CTC1-203ENST00000578240 ALG10BQ5I7T1 473 aa11.96□□□□□ -0.5
CTC1-203ENST00000578240 DCAF10Q5QP82 559 aa11.96□□□□□ -0.5
CTC1-203ENST00000578240 ZNF691Q5VV52 312 aa11.96□□□□□ -0.5
CTC1-203ENST00000578240 LAIR2Q6ISS4 152 aa11.96□□□□□ -0.5
CTC1-203ENST00000578240 CD300LDQ6UXZ3 194 aa11.96□□□□□ -0.5
CTC1-203ENST00000578240 ZNF730Q6ZMV8 503 aa11.96□□□□□ -0.5
CTC1-203ENST00000578240 ATG4DQ86TL0 474 aaPredicted RBP11.96□□□□□ -0.5
CTC1-203ENST00000578240 RPS19BP1Q86WX3 136 aaKnown RBP11.96□□□□□ -0.5
CTC1-203ENST00000578240 ZNF227Q86WZ6 799 aa11.96□□□□□ -0.5
CTC1-203ENST00000578240 TOR1AIP2Q8NFQ8 470 aa11.96□□□□□ -0.5
CTC1-203ENST00000578240 NPAS1Q99742 590 aa11.96□□□□□ -0.5
CTC1-203ENST00000578240 PLA2G12AQ9BZM1 189 aa11.96□□□□□ -0.5
CTC1-203ENST00000578240 DSN1Q9H410 356 aa11.96□□□□□ -0.5
CTC1-203ENST00000578240 Q9H521 79 aa11.96□□□□□ -0.5
CTC1-203ENST00000578240 PROK2Q9HC23 129 aa11.96□□□□□ -0.5
CTC1-203ENST00000578240 EIF4E1BA6NMX2 242 aaKnown RBP11.95□□□□□ -0.5
CTC1-203ENST00000578240 BCKDKO14874 412 aa11.95□□□□□ -0.5
CTC1-203ENST00000578240 EIF4E2O60573 245 aaKnown RBP11.95□□□□□ -0.5
CTC1-203ENST00000578240 CCL3P10147 92 aa11.95□□□□□ -0.5
CTC1-203ENST00000578240 FUT1P19526 365 aa11.95□□□□□ -0.5
CTC1-203ENST00000578240 CHMP24386 653 aa11.95□□□□□ -0.5
CTC1-203ENST00000578240 CASP3P42574 277 aa11.95□□□□□ -0.5
CTC1-203ENST00000578240 IDH2P48735 452 aaKnown RBP11.95□□□□□ -0.5
CTC1-203ENST00000578240 FXYD6P3P58550 94 aa11.95□□□□□ -0.5
CTC1-203ENST00000578240 KEAP1Q14145 624 aa11.95□□□□□ -0.5
CTC1-203ENST00000578240 INPP5JQ15735 1006 aaPredicted RBP11.95□□□□□ -0.5
CTC1-203ENST00000578240 SWT1Q5T5J6 900 aaKnown RBP11.95□□□□□ -0.5
CTC1-203ENST00000578240 TMEM81Q6P7N7 255 aa11.95□□□□□ -0.5
CTC1-203ENST00000578240 OR8D4Q8NGM9 314 aa11.95□□□□□ -0.5
CTC1-203ENST00000578240 FBLIM1Q8WUP2 373 aa11.95□□□□□ -0.5
CTC1-203ENST00000578240 TMEM239Q8WW34 195 aa11.95□□□□□ -0.5
CTC1-203ENST00000578240 TMCO6Q96DC7 493 aa11.95□□□□□ -0.5
CTC1-203ENST00000578240 HRASLS5Q96KN8 279 aa11.95□□□□□ -0.5
CTC1-203ENST00000578240 TMEM27Q9HBJ8 222 aa11.95□□□□□ -0.5
CTC1-203ENST00000578240 ATP13A2Q9NQ11 1180 aa11.95□□□□□ -0.5
CTC1-203ENST00000578240 ORC6Q9Y5N6 252 aa11.95□□□□□ -0.5
CTC1-203ENST00000578240 WIF1Q9Y5W5 379 aa11.95□□□□□ -0.5
CTC1-203ENST00000578240 KMT2BQ9UMN6 2715 aaPredicted RBP11.95□□□□□ -0.5
CTC1-203ENST00000578240 MAP1BP46821 2468 aaKnown RBP11.95□□□□□ -0.5
CTC1-203ENST00000578240 A0A087WUJ7 227 aa11.94□□□□□ -0.5
CTC1-203ENST00000578240 IGLV3-32A0A0A0MS00 114 aa11.94□□□□□ -0.5
CTC1-203ENST00000578240 H3BNH8 94 aa11.94□□□□□ -0.5
CTC1-203ENST00000578240 GTPBP1O00178 669 aaKnown RBP11.94□□□□□ -0.5
CTC1-203ENST00000578240 KPNA4O00629 521 aaPredicted RBP11.94□□□□□ -0.5
CTC1-203ENST00000578240 LINGO3P0C6S8 592 aa11.94□□□□□ -0.5
CTC1-203ENST00000578240 MAKP20794 623 aa11.94□□□□□ -0.5
CTC1-203ENST00000578240 FPR3P25089 353 aa11.94□□□□□ -0.5
CTC1-203ENST00000578240 SSR4P51571 173 aa11.94□□□□□ -0.5
CTC1-203ENST00000578240 P2RX1P51575 399 aa11.94□□□□□ -0.5
CTC1-203ENST00000578240 ISL1P61371 349 aa11.94□□□□□ -0.5
CTC1-203ENST00000578240 CLN3Q13286 438 aa11.94□□□□□ -0.5
CTC1-203ENST00000578240 COL28A1Q2UY09 1125 aa11.94□□□□□ -0.5
CTC1-203ENST00000578240 TTC23Q5W5X9 447 aa11.94□□□□□ -0.5
CTC1-203ENST00000578240 OR5M10Q6IEU7 315 aa11.94□□□□□ -0.5
CTC1-203ENST00000578240 ULK3Q6PHR2 472 aa11.94□□□□□ -0.5
CTC1-203ENST00000578240 IL20RBQ6UXL0 311 aa11.94□□□□□ -0.5
CTC1-203ENST00000578240 P3H2Q8IVL5 708 aa11.94□□□□□ -0.5
CTC1-203ENST00000578240 LINC00471Q8N535 108 aa11.94□□□□□ -0.5
CTC1-203ENST00000578240 GPR119Q8TDV5 335 aa11.94□□□□□ -0.5
CTC1-203ENST00000578240 DUSP19Q8WTR2 217 aa11.94□□□□□ -0.5
CTC1-203ENST00000578240 FRMD6Q96NE9 622 aa11.94□□□□□ -0.5
CTC1-203ENST00000578240 NR1H4Q96RI1 486 aaPredicted RBP11.94□□□□□ -0.5
CTC1-203ENST00000578240 UCK2Q9BZX2 261 aa11.94□□□□□ -0.5
CTC1-203ENST00000578240 CCDC86Q9H6F5 360 aaKnown RBP11.94□□□□□ -0.5
CTC1-203ENST00000578240 AASSQ9UDR5 926 aa11.94□□□□□ -0.5
CTC1-203ENST00000578240 ALPK2Q86TB3 2170 aa11.94□□□□□ -0.5
CTC1-203ENST00000578240 ZNF407Q9C0G0 2248 aa11.94□□□□□ -0.5
CTC1-203ENST00000578240 IGF2RP11717 2491 aa11.94□□□□□ -0.5
CTC1-203ENST00000578240 TRABD2BA6NFA1 517 aa11.94□□□□□ -0.5
CTC1-203ENST00000578240 ZAR1LA6NP61 321 aa11.94□□□□□ -0.5
CTC1-203ENST00000578240 M0R129 80 aa11.94□□□□□ -0.5
CTC1-203ENST00000578240 GNB5O14775 395 aa11.94□□□□□ -0.5
CTC1-203ENST00000578240 LYNP07948 512 aa11.94□□□□□ -0.5
CTC1-203ENST00000578240 ICAM2P13598 275 aa11.94□□□□□ -0.5
CTC1-203ENST00000578240 OSMP13725 252 aa11.94□□□□□ -0.5
CTC1-203ENST00000578240 CDH2P19022 906 aaPredicted RBP11.94□□□□□ -0.5
CTC1-203ENST00000578240 CTBP2P56545 445 aa11.94□□□□□ -0.5
CTC1-203ENST00000578240 RPP38P78345 283 aaKnown RBP11.94□□□□□ -0.5
CTC1-203ENST00000578240 EGR4Q05215 589 aa11.94□□□□□ -0.5
CTC1-203ENST00000578240 PRKCDQ05655 676 aa11.94□□□□□ -0.5
CTC1-203ENST00000578240 CD47Q08722 323 aa11.94□□□□□ -0.5
CTC1-203ENST00000578240 TSPAN31Q12999 210 aa11.94□□□□□ -0.5
CTC1-203ENST00000578240 FHL1Q13642 323 aa11.94□□□□□ -0.5
CTC1-203ENST00000578240 PRAMEF20Q5VT98 475 aa11.94□□□□□ -0.5
CTC1-203ENST00000578240 WBP2NLQ6ICG8 309 aa11.94□□□□□ -0.5
CTC1-203ENST00000578240 OPN5Q6U736 354 aa11.94□□□□□ -0.5
CTC1-203ENST00000578240 BEST3Q8N1M1 668 aa11.94□□□□□ -0.5
CTC1-203ENST00000578240 OR5W2Q8NH69 310 aa11.94□□□□□ -0.5
CTC1-203ENST00000578240 B4GALNT2Q8NHY0 566 aa11.94□□□□□ -0.5
CTC1-203ENST00000578240 PIGXQ8TBF5 258 aa11.94□□□□□ -0.5
CTC1-203ENST00000578240 PAQR8Q8TEZ7 354 aa11.94□□□□□ -0.5
CTC1-203ENST00000578240 ASB15Q8WXK1 588 aa11.94□□□□□ -0.5
CTC1-203ENST00000578240 THOC3Q96J01 351 aaKnown RBP11.94□□□□□ -0.5
CTC1-203ENST00000578240 MPP4Q96JB8 637 aa11.94□□□□□ -0.5
CTC1-203ENST00000578240 ADAM19Q9H013 955 aa11.94□□□□□ -0.5
CTC1-203ENST00000578240 EGLN3Q9H6Z9 239 aa11.94□□□□□ -0.5
CTC1-203ENST00000578240 KLRF1Q9NZS2 232 aa11.94□□□□□ -0.5
CTC1-203ENST00000578240 DNAJC13O75165 2243 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms