RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 ARF3P61204 181 aaPredicted RBP12.68□□□□□ -0.38
NDEL1-204ENST00000578172 DEFA5Q01523 94 aa12.68□□□□□ -0.38
NDEL1-204ENST00000578172 ETFBKMTQ8IXQ9 262 aa12.68□□□□□ -0.38
NDEL1-204ENST00000578172 OR52R1Q8NGF1 315 aa12.68□□□□□ -0.38
NDEL1-204ENST00000578172 OR5J2Q8NH18 312 aa12.68□□□□□ -0.38
NDEL1-204ENST00000578172 GHSRQ92847 366 aa12.68□□□□□ -0.38
NDEL1-204ENST00000578172 UPRTQ96BW1 309 aa12.68□□□□□ -0.38
NDEL1-204ENST00000578172 OR14A2Q96R54 314 aa12.68□□□□□ -0.38
NDEL1-204ENST00000578172 LSM2Q9Y333 95 aaKnown RBP12.68□□□□□ -0.38
NDEL1-204ENST00000578172 PCDHGB2Q9Y5G2 931 aa12.68□□□□□ -0.38
NDEL1-204ENST00000578172 LAMA1P25391 3075 aa12.67□□□□□ -0.38
NDEL1-204ENST00000578172 CHD9Q3L8U1 2897 aa12.67□□□□□ -0.38
NDEL1-204ENST00000578172 TRBV2A0A0J9YWF9 115 aa12.67□□□□□ -0.38
NDEL1-204ENST00000578172 HMX3A6NHT5 357 aa12.67□□□□□ -0.38
NDEL1-204ENST00000578172 FABP7O15540 132 aa12.67□□□□□ -0.38
NDEL1-204ENST00000578172 SDC3O75056 442 aa12.67□□□□□ -0.38
NDEL1-204ENST00000578172 F13BP05160 661 aa12.67□□□□□ -0.38
NDEL1-204ENST00000578172 CELA2BP08218 269 aaPredicted RBP12.67□□□□□ -0.38
NDEL1-204ENST00000578172 HSD17B2P37059 387 aa12.67□□□□□ -0.38
NDEL1-204ENST00000578172 TMEM240Q5SV17 173 aa12.67□□□□□ -0.38
NDEL1-204ENST00000578172 ZNF511Q8NB15 262 aa12.67□□□□□ -0.38
NDEL1-204ENST00000578172 OR4D9Q8NGE8 314 aa12.67□□□□□ -0.38
NDEL1-204ENST00000578172 SMPDL3BQ92485 455 aa12.67□□□□□ -0.38
NDEL1-204ENST00000578172 RIT1Q92963 219 aa12.67□□□□□ -0.38
NDEL1-204ENST00000578172 HS6ST2Q96MM7 605 aa12.67□□□□□ -0.38
NDEL1-204ENST00000578172 NMNAT3Q96T66 252 aa12.67□□□□□ -0.38
NDEL1-204ENST00000578172 C1QTNF7Q9BXJ2 289 aa12.67□□□□□ -0.38
NDEL1-204ENST00000578172 KCNN2Q9H2S1 579 aa12.67□□□□□ -0.38
NDEL1-204ENST00000578172 EPHX3Q9H6B9 360 aa12.67□□□□□ -0.38
NDEL1-204ENST00000578172 PNO1Q9NRX1 252 aaKnown RBP12.67□□□□□ -0.38
NDEL1-204ENST00000578172 C9orf50Q5SZB4 431 aa12.67□□□□□ -0.38
NDEL1-204ENST00000578172 ANKRD54Q6NXT1 300 aa12.67□□□□□ -0.38
NDEL1-204ENST00000578172 ZNF322Q6U7Q0 402 aaPredicted RBP12.67□□□□□ -0.38
NDEL1-204ENST00000578172 PIAS4Q8N2W9 510 aaPredicted RBP12.67□□□□□ -0.38
NDEL1-204ENST00000578172 DNAAF1Q8NEP3 725 aa12.67□□□□□ -0.38
NDEL1-204ENST00000578172 THAP3Q8WTV1 239 aaPredicted RBP12.67□□□□□ -0.38
NDEL1-204ENST00000578172 FAM3CQ92520 227 aa12.67□□□□□ -0.38
NDEL1-204ENST00000578172 BABAM2Q9NXR7 383 aa12.67□□□□□ -0.38
NDEL1-204ENST00000578172 CALML5Q9NZT1 146 aa12.67□□□□□ -0.38
NDEL1-204ENST00000578172 MARK1Q9P0L2 795 aa12.67□□□□□ -0.38
NDEL1-204ENST00000578172 FLVCR2Q9UPI3 526 aa12.67□□□□□ -0.38
NDEL1-204ENST00000578172 RWDD3Q9Y3V2 267 aa12.67□□□□□ -0.38
NDEL1-204ENST00000578172 RNF13O43567 381 aa12.67□□□□□ -0.38
NDEL1-204ENST00000578172 STX11O75558 287 aa12.67□□□□□ -0.38
NDEL1-204ENST00000578172 ZIC2O95409 532 aaPredicted RBP12.67□□□□□ -0.38
NDEL1-204ENST00000578172 PLATP00750 562 aa12.67□□□□□ -0.38
NDEL1-204ENST00000578172 ARSBP15848 533 aa12.67□□□□□ -0.38
NDEL1-204ENST00000578172 PEBP1P30086 187 aaKnown RBP12.67□□□□□ -0.38
NDEL1-204ENST00000578172 MAZP56270 477 aaKnown RBP12.67□□□□□ -0.38
NDEL1-204ENST00000578172 OCLNQ16625 522 aa12.67□□□□□ -0.38
NDEL1-204ENST00000578172 C3orf38Q5JPI3 329 aa12.67□□□□□ -0.38
NDEL1-204ENST00000578172 BICRALQ6AI39 1079 aa12.67□□□□□ -0.38
NDEL1-204ENST00000578172 ZNF620Q6ZNG0 422 aa12.67□□□□□ -0.38
NDEL1-204ENST00000578172 LINC00471Q8N535 108 aa12.67□□□□□ -0.38
NDEL1-204ENST00000578172 GDPD1Q8N9F7 314 aa12.67□□□□□ -0.38
NDEL1-204ENST00000578172 TMEM52Q8NDY8 209 aa12.67□□□□□ -0.38
NDEL1-204ENST00000578172 SPACA7Q96KW9 195 aa12.67□□□□□ -0.38
NDEL1-204ENST00000578172 SDF2Q99470 211 aa12.67□□□□□ -0.38
NDEL1-204ENST00000578172 TPSD1Q9BZJ3 242 aa12.67□□□□□ -0.38
NDEL1-204ENST00000578172 MTHFD2LQ9H903 347 aaPredicted RBP12.67□□□□□ -0.38
NDEL1-204ENST00000578172 CDH10Q9Y6N8 788 aa12.67□□□□□ -0.38
NDEL1-204ENST00000578172 HRKO00198 91 aa12.66□□□□□ -0.38
NDEL1-204ENST00000578172 MT-ND5P03915 603 aa12.66□□□□□ -0.38
NDEL1-204ENST00000578172 HRGP04196 525 aa12.66□□□□□ -0.38
NDEL1-204ENST00000578172 MAS1P04201 325 aa12.66□□□□□ -0.38
NDEL1-204ENST00000578172 ZNF3P17036 446 aa12.66□□□□□ -0.38
NDEL1-204ENST00000578172 FOXL2P58012 376 aa12.66□□□□□ -0.38
NDEL1-204ENST00000578172 DPTQ07507 201 aa12.66□□□□□ -0.38
NDEL1-204ENST00000578172 ZNHIT3Q15649 155 aaPredicted RBP12.66□□□□□ -0.38
NDEL1-204ENST00000578172 Q5BKY6 102 aa12.66□□□□□ -0.38
NDEL1-204ENST00000578172 SLC25A25Q6KCM7 469 aa12.66□□□□□ -0.38
NDEL1-204ENST00000578172 WDR88Q6ZMY6 472 aa12.66□□□□□ -0.38
NDEL1-204ENST00000578172 KANSL1Q7Z3B3 1105 aa12.66□□□□□ -0.38
NDEL1-204ENST00000578172 OR8S1Q8NH09 359 aa12.66□□□□□ -0.38
NDEL1-204ENST00000578172 ZNF563Q8TA94 476 aa12.66□□□□□ -0.38
NDEL1-204ENST00000578172 MS4A4EQ96PG1 132 aa12.66□□□□□ -0.38
NDEL1-204ENST00000578172 CACNG6Q9BXT2 260 aa12.66□□□□□ -0.38
NDEL1-204ENST00000578172 OR8D2Q9GZM6 311 aa12.66□□□□□ -0.38
NDEL1-204ENST00000578172 NRSN2Q9GZP1 204 aa12.66□□□□□ -0.38
NDEL1-204ENST00000578172 MGAT4AQ9UM21 535 aa12.66□□□□□ -0.38
NDEL1-204ENST00000578172 A0A1B0GTH9 108 aa12.66□□□□□ -0.38
NDEL1-204ENST00000578172 TRAPPC13A5PLN9 417 aa12.66□□□□□ -0.38
NDEL1-204ENST00000578172 SURF4O15260 269 aa12.66□□□□□ -0.38
NDEL1-204ENST00000578172 RGS9O75916 674 aaPredicted RBP12.66□□□□□ -0.38
NDEL1-204ENST00000578172 TP53P04637 393 aaPredicted RBP12.66□□□□□ -0.38
NDEL1-204ENST00000578172 PKLRP30613 574 aa12.66□□□□□ -0.38
NDEL1-204ENST00000578172 VASPP50552 380 aaPredicted RBP12.66□□□□□ -0.38
NDEL1-204ENST00000578172 CDK5Q00535 292 aa12.66□□□□□ -0.38
NDEL1-204ENST00000578172 ARHGAP19Q14CB8 494 aa12.66□□□□□ -0.38
NDEL1-204ENST00000578172 CDK10Q15131 360 aa12.66□□□□□ -0.38
NDEL1-204ENST00000578172 AMZ1Q400G9 498 aa12.66□□□□□ -0.38
NDEL1-204ENST00000578172 TMEM35AQ53FP2 167 aa12.66□□□□□ -0.38
NDEL1-204ENST00000578172 OR5M10Q6IEU7 315 aa12.66□□□□□ -0.38
NDEL1-204ENST00000578172 ADAMTSL4Q6UY14 1074 aa12.66□□□□□ -0.38
NDEL1-204ENST00000578172 RTL4Q6ZR62 310 aa12.66□□□□□ -0.38
NDEL1-204ENST00000578172 VN1R4Q7Z5H5 301 aa12.66□□□□□ -0.38
NDEL1-204ENST00000578172 MEIOBQ8N635 442 aa12.66□□□□□ -0.38
NDEL1-204ENST00000578172 NATD1Q8N6N6 113 aa12.66□□□□□ -0.38
NDEL1-204ENST00000578172 CSNK1A1LQ8N752 337 aa12.66□□□□□ -0.38
NDEL1-204ENST00000578172 AVL9Q8NBF6 648 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms