RNA–Protein interactions for RNA: ENST00000577897.1

SREBF1-217, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-217ENST00000577897 IPCEF1Q8WWN9 437 aaPredicted RBP12.85□□□□□ -0.35
SREBF1-217ENST00000577897 DGCR14Q96DF8 476 aaKnown RBP12.85□□□□□ -0.35
SREBF1-217ENST00000577897 HRASLS5Q96KN8 279 aa12.85□□□□□ -0.35
SREBF1-217ENST00000577897 SDF2Q99470 211 aa12.85□□□□□ -0.35
SREBF1-217ENST00000577897 PITX2Q99697 317 aa12.85□□□□□ -0.35
SREBF1-217ENST00000577897 ARHGDIGQ99819 225 aa12.85□□□□□ -0.35
SREBF1-217ENST00000577897 TUBA1CQ9BQE3 449 aa12.85□□□□□ -0.35
SREBF1-217ENST00000577897 PRRG3Q9BZD7 231 aa12.85□□□□□ -0.35
SREBF1-217ENST00000577897 ZNF350Q9GZX5 532 aa12.85□□□□□ -0.35
SREBF1-217ENST00000577897 SAP130Q9H0E3 1048 aa12.85□□□□□ -0.35
SREBF1-217ENST00000577897 MKKSQ9NPJ1 570 aaPredicted RBP12.85□□□□□ -0.35
SREBF1-217ENST00000577897 IMPAD1Q9NX62 359 aa12.85□□□□□ -0.35
SREBF1-217ENST00000577897 NDRG4Q9ULP0 352 aaKnown RBP12.85□□□□□ -0.35
SREBF1-217ENST00000577897 ZNF443Q9Y2A4 671 aaPredicted RBP12.85□□□□□ -0.35
SREBF1-217ENST00000577897 AKAP6Q13023 2319 aa12.84□□□□□ -0.35
SREBF1-217ENST00000577897 PRAMEF27A3QJZ7 478 aa12.84□□□□□ -0.35
SREBF1-217ENST00000577897 CCDC160A6NGH7 325 aa12.84□□□□□ -0.35
SREBF1-217ENST00000577897 TRIM64A6NGJ6 449 aa12.84□□□□□ -0.35
SREBF1-217ENST00000577897 NME6O75414 186 aaPredicted RBP12.84□□□□□ -0.35
SREBF1-217ENST00000577897 OR5F1O95221 314 aa12.84□□□□□ -0.35
SREBF1-217ENST00000577897 CLIC3O95833 236 aa12.84□□□□□ -0.35
SREBF1-217ENST00000577897 ANGPTL1O95841 491 aa12.84□□□□□ -0.35
SREBF1-217ENST00000577897 HPP00738 406 aa12.84□□□□□ -0.35
SREBF1-217ENST00000577897 GABRA3P34903 492 aa12.84□□□□□ -0.35
SREBF1-217ENST00000577897 LIMS1P48059 325 aa12.84□□□□□ -0.35
SREBF1-217ENST00000577897 ISL1P61371 349 aa12.84□□□□□ -0.35
SREBF1-217ENST00000577897 DCAF7P61962 342 aa12.84□□□□□ -0.35
SREBF1-217ENST00000577897 RPP38P78345 283 aaKnown RBP12.84□□□□□ -0.35
SREBF1-217ENST00000577897 ZNF267Q14586 743 aaPredicted RBP12.84□□□□□ -0.35
SREBF1-217ENST00000577897 GPR68Q15743 365 aa12.84□□□□□ -0.35
SREBF1-217ENST00000577897 CYP27C1Q4G0S4 372 aa12.84□□□□□ -0.35
SREBF1-217ENST00000577897 MFSD4BQ5TF39 518 aa12.84□□□□□ -0.35
SREBF1-217ENST00000577897 ZNF773Q6PK81 442 aa12.84□□□□□ -0.35
SREBF1-217ENST00000577897 FRRS1Q6ZNA5 592 aa12.84□□□□□ -0.35
SREBF1-217ENST00000577897 PLEKHM3Q6ZWE6 761 aa12.84□□□□□ -0.35
SREBF1-217ENST00000577897 GPR141Q7Z602 305 aa12.84□□□□□ -0.35
SREBF1-217ENST00000577897 METTL27Q8N6F8 245 aaPredicted RBP12.84□□□□□ -0.35
SREBF1-217ENST00000577897 AQP11Q8NBQ7 271 aa12.84□□□□□ -0.35
SREBF1-217ENST00000577897 TMEM52Q8NDY8 209 aa12.84□□□□□ -0.35
SREBF1-217ENST00000577897 SPATA3Q8NHX4 192 aa12.84□□□□□ -0.35
SREBF1-217ENST00000577897 SLC35B4Q969S0 331 aa12.84□□□□□ -0.35
SREBF1-217ENST00000577897 ZNF566Q969W8 418 aa12.84□□□□□ -0.35
SREBF1-217ENST00000577897 C8orf44Q96CB5 159 aa12.84□□□□□ -0.35
SREBF1-217ENST00000577897 Q96MT0 163 aa12.84□□□□□ -0.35
SREBF1-217ENST00000577897 PTCHD1Q96NR3 888 aa12.84□□□□□ -0.35
SREBF1-217ENST00000577897 FOXC2Q99958 501 aa12.84□□□□□ -0.35
SREBF1-217ENST00000577897 DGCR6LQ9BY27 220 aa12.84□□□□□ -0.35
SREBF1-217ENST00000577897 UCK2Q9BZX2 261 aa12.84□□□□□ -0.35
SREBF1-217ENST00000577897 HOXD1Q9GZZ0 328 aa12.84□□□□□ -0.35
SREBF1-217ENST00000577897 WDR54Q9H977 334 aa12.84□□□□□ -0.35
SREBF1-217ENST00000577897 FOLH1BQ9HBA9 442 aa12.84□□□□□ -0.35
SREBF1-217ENST00000577897 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.84□□□□□ -0.35
SREBF1-217ENST00000577897 TNFRSF10DQ9UBN6 386 aa12.84□□□□□ -0.35
SREBF1-217ENST00000577897 CTSFQ9UBX1 484 aa12.84□□□□□ -0.35
SREBF1-217ENST00000577897 FN1P02751 2386 aaKnown RBP12.84□□□□□ -0.35
SREBF1-217ENST00000577897 A0A1W2PS29 197 aa12.83□□□□□ -0.36
SREBF1-217ENST00000577897 AGAP5A6NIR3 686 aa12.83□□□□□ -0.36
SREBF1-217ENST00000577897 J3KTA2 159 aa12.83□□□□□ -0.36
SREBF1-217ENST00000577897 FMO6PO60774 539 aa12.83□□□□□ -0.36
SREBF1-217ENST00000577897 DNAJB6O75190 326 aa12.83□□□□□ -0.36
SREBF1-217ENST00000577897 NID1P14543 1247 aa12.83□□□□□ -0.36
SREBF1-217ENST00000577897 CBLP22681 906 aa12.83□□□□□ -0.36
SREBF1-217ENST00000577897 TRHRP34981 398 aaPredicted RBP12.83□□□□□ -0.36
SREBF1-217ENST00000577897 PTGER1P34995 402 aa12.83□□□□□ -0.36
SREBF1-217ENST00000577897 GGT2P36268 569 aa12.83□□□□□ -0.36
SREBF1-217ENST00000577897 MGAT2Q10469 447 aa12.83□□□□□ -0.36
SREBF1-217ENST00000577897 FUT5Q11128 374 aa12.83□□□□□ -0.36
SREBF1-217ENST00000577897 EXOSC6Q5RKV6 272 aaKnown RBP12.83□□□□□ -0.36
SREBF1-217ENST00000577897 RNF220Q5VTB9 566 aa12.83□□□□□ -0.36
SREBF1-217ENST00000577897 TYW3Q6IPR3 259 aaKnown RBP12.83□□□□□ -0.36
SREBF1-217ENST00000577897 C3P1Q6ZMU1 363 aa12.83□□□□□ -0.36
SREBF1-217ENST00000577897 COX15Q7KZN9 410 aa12.83□□□□□ -0.36
SREBF1-217ENST00000577897 TSEN54Q7Z6J9 526 aaKnown RBP12.83□□□□□ -0.36
SREBF1-217ENST00000577897 PRSS58Q8IYP2 241 aa12.83□□□□□ -0.36
SREBF1-217ENST00000577897 SVOPQ8N4V2 548 aa12.83□□□□□ -0.36
SREBF1-217ENST00000577897 ACBD4Q8NC06 268 aa12.83□□□□□ -0.36
SREBF1-217ENST00000577897 HAS2Q92819 552 aa12.83□□□□□ -0.36
SREBF1-217ENST00000577897 HOXB13Q92826 284 aaPredicted RBP12.83□□□□□ -0.36
SREBF1-217ENST00000577897 DAZLQ92904 295 aaKnown RBP12.83□□□□□ -0.36
SREBF1-217ENST00000577897 ZNF559Q9BR84 538 aa12.83□□□□□ -0.36
SREBF1-217ENST00000577897 CRB3Q9BUF7 120 aa12.83□□□□□ -0.36
SREBF1-217ENST00000577897 CNPPD1Q9BV87 410 aa12.83□□□□□ -0.36
SREBF1-217ENST00000577897 TSPAN10Q9H1Z9 355 aaPredicted RBP12.83□□□□□ -0.36
SREBF1-217ENST00000577897 CXXC4Q9H2H0 198 aa12.83□□□□□ -0.36
SREBF1-217ENST00000577897 MKLN1Q9UL63 735 aa12.83□□□□□ -0.36
SREBF1-217ENST00000577897 OR10H1Q9Y4A9 318 aa12.83□□□□□ -0.36
SREBF1-217ENST00000577897 KCNE3Q9Y6H6 103 aa12.83□□□□□ -0.36
SREBF1-217ENST00000577897 CLCA3PQ9Y6N3 262 aa12.83□□□□□ -0.36
SREBF1-217ENST00000577897 ATRQ13535 2644 aa12.83□□□□□ -0.36
SREBF1-217ENST00000577897 VPS13CQ709C8 3753 aa12.82□□□□□ -0.36
SREBF1-217ENST00000577897 NSG1A0A0A6YYJ2 146 aa12.82□□□□□ -0.36
SREBF1-217ENST00000577897 SH3PXD2BA1X283 911 aa12.82□□□□□ -0.36
SREBF1-217ENST00000577897 TRIM64CA6NLI5 447 aa12.82□□□□□ -0.36
SREBF1-217ENST00000577897 M0R3H8 397 aa12.82□□□□□ -0.36
SREBF1-217ENST00000577897 ZNHIT1O43257 154 aa12.82□□□□□ -0.36
SREBF1-217ENST00000577897 KIAA0513O60268 411 aa12.82□□□□□ -0.36
SREBF1-217ENST00000577897 ABCB7O75027 752 aa12.82□□□□□ -0.36
SREBF1-217ENST00000577897 MITFO75030 526 aaPredicted RBP12.82□□□□□ -0.36
SREBF1-217ENST00000577897 CYP7B1O75881 506 aa12.82□□□□□ -0.36
SREBF1-217ENST00000577897 WDPCPO95876 746 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms