RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 CHERPQ8IWX8 916 aaKnown RBP7.75□□□□□ -1.17
NUP88-211ENST00000575976 ULK2Q8IYT8 1036 aa7.75□□□□□ -1.17
NUP88-211ENST00000575976 GHDCQ8N2G8 530 aa7.75□□□□□ -1.17
NUP88-211ENST00000575976 OR6T1Q8NGN1 323 aa7.75□□□□□ -1.17
NUP88-211ENST00000575976 PROX1Q92786 737 aa7.75□□□□□ -1.17
NUP88-211ENST00000575976 SLC35B4Q969S0 331 aa7.75□□□□□ -1.17
NUP88-211ENST00000575976 MCUR1Q96AQ8 359 aa7.75□□□□□ -1.17
NUP88-211ENST00000575976 MIB2Q96AX9 1013 aa7.75□□□□□ -1.17
NUP88-211ENST00000575976 ZBTB8AQ96BR9 441 aa7.75□□□□□ -1.17
NUP88-211ENST00000575976 CCDC124Q96CT7 223 aaKnown RBP7.75□□□□□ -1.17
NUP88-211ENST00000575976 TPD52L3Q96J77 140 aa7.75□□□□□ -1.17
NUP88-211ENST00000575976 NSMCE2Q96MF7 247 aa7.75□□□□□ -1.17
NUP88-211ENST00000575976 SFXN2Q96NB2 322 aa7.75□□□□□ -1.17
NUP88-211ENST00000575976 ACER3Q9NUN7 267 aa7.75□□□□□ -1.17
NUP88-211ENST00000575976 DCAF13Q9NV06 445 aaKnown RBP7.75□□□□□ -1.17
NUP88-211ENST00000575976 ADPRHL2Q9NX46 363 aa7.75□□□□□ -1.17
NUP88-211ENST00000575976 ACTR3BQ9P1U1 418 aa7.75□□□□□ -1.17
NUP88-211ENST00000575976 SPRR3Q9UBC9 169 aa7.75□□□□□ -1.17
NUP88-211ENST00000575976 TNFRSF10DQ9UBN6 386 aa7.75□□□□□ -1.17
NUP88-211ENST00000575976 BAG5Q9UL15 447 aa7.75□□□□□ -1.17
NUP88-211ENST00000575976 SH3GLB1Q9Y371 365 aa7.75□□□□□ -1.17
NUP88-211ENST00000575976 NCKAP5O14513 1909 aa7.75□□□□□ -1.17
NUP88-211ENST00000575976 C7orf72A4D263 438 aa7.74□□□□□ -1.17
NUP88-211ENST00000575976 NPIPA2E9PIF3 369 aa7.74□□□□□ -1.17
NUP88-211ENST00000575976 NPIPA3F8WFD2 350 aa7.74□□□□□ -1.17
NUP88-211ENST00000575976 ETV2O00321 342 aaPredicted RBP7.74□□□□□ -1.17
NUP88-211ENST00000575976 FAAHO00519 579 aa7.74□□□□□ -1.17
NUP88-211ENST00000575976 ACOT8O14734 319 aa7.74□□□□□ -1.17
NUP88-211ENST00000575976 EFNA2O43921 213 aa7.74□□□□□ -1.17
NUP88-211ENST00000575976 PRKD3O94806 890 aa7.74□□□□□ -1.17
NUP88-211ENST00000575976 NTN1O95631 604 aa7.74□□□□□ -1.17
NUP88-211ENST00000575976 BMP7P18075 431 aa7.74□□□□□ -1.17
NUP88-211ENST00000575976 IL11P20809 199 aa7.74□□□□□ -1.17
NUP88-211ENST00000575976 CHMP24386 653 aa7.74□□□□□ -1.17
NUP88-211ENST00000575976 HTR2AP28223 471 aa7.74□□□□□ -1.17
NUP88-211ENST00000575976 ADH6P28332 368 aa7.74□□□□□ -1.17
NUP88-211ENST00000575976 PTGS2P35354 604 aa7.74□□□□□ -1.17
NUP88-211ENST00000575976 DLX5P56178 289 aa7.74□□□□□ -1.17
NUP88-211ENST00000575976 CRYZQ08257 329 aaKnown RBP7.74□□□□□ -1.17
NUP88-211ENST00000575976 TRAP1Q12931 704 aaKnown RBP7.74□□□□□ -1.17
NUP88-211ENST00000575976 OR1Q1Q15612 314 aa7.74□□□□□ -1.17
NUP88-211ENST00000575976 NPTX1Q15818 432 aa7.74□□□□□ -1.17
NUP88-211ENST00000575976 IFI44LQ53G44 452 aa7.74□□□□□ -1.17
NUP88-211ENST00000575976 NHSL2Q5HYW2 709 aa7.74□□□□□ -1.17
NUP88-211ENST00000575976 DCST1Q5T197 706 aa7.74□□□□□ -1.17
NUP88-211ENST00000575976 LCE2DQ5TA82 110 aaPredicted RBP7.74□□□□□ -1.17
NUP88-211ENST00000575976 VASNQ6EMK4 673 aa7.74□□□□□ -1.17
NUP88-211ENST00000575976 LCN8Q6JVE9 175 aa7.74□□□□□ -1.17
NUP88-211ENST00000575976 ARHGAP11AQ6P4F7 1023 aa7.74□□□□□ -1.17
NUP88-211ENST00000575976 ENPP6Q6UWR7 440 aa7.74□□□□□ -1.17
NUP88-211ENST00000575976 PLEKHM3Q6ZWE6 761 aa7.74□□□□□ -1.17
NUP88-211ENST00000575976 FKBP9P1Q75LS8 142 aa7.74□□□□□ -1.17
NUP88-211ENST00000575976 DHFR2Q86XF0 187 aa7.74□□□□□ -1.17
NUP88-211ENST00000575976 EID3Q8N140 333 aa7.74□□□□□ -1.17
NUP88-211ENST00000575976 CADM2Q8N3J6 435 aa7.74□□□□□ -1.17
NUP88-211ENST00000575976 GTPBP8Q8N3Z3 284 aaPredicted RBP7.74□□□□□ -1.17
NUP88-211ENST00000575976 FAM86B1Q8N7N1 296 aa7.74□□□□□ -1.17
NUP88-211ENST00000575976 ST6GALNAC3Q8NDV1 305 aa7.74□□□□□ -1.17
NUP88-211ENST00000575976 OR52E4Q8NGH9 312 aa7.74□□□□□ -1.17
NUP88-211ENST00000575976 TMEM234Q8WY98 164 aa7.74□□□□□ -1.17
NUP88-211ENST00000575976 LZICQ8WZA0 190 aa7.74□□□□□ -1.17
NUP88-211ENST00000575976 ST8SIA1Q92185 356 aa7.74□□□□□ -1.17
NUP88-211ENST00000575976 ABTB1Q969K4 478 aaPredicted RBP7.74□□□□□ -1.17
NUP88-211ENST00000575976 ASB9Q96DX5 294 aa7.74□□□□□ -1.17
NUP88-211ENST00000575976 PYURFQ96I23 114 aa7.74□□□□□ -1.17
NUP88-211ENST00000575976 HSH2DQ96JZ2 352 aa7.74□□□□□ -1.17
NUP88-211ENST00000575976 MRGPRX4Q96LA9 322 aa7.74□□□□□ -1.17
NUP88-211ENST00000575976 RNF145Q96MT1 663 aa7.74□□□□□ -1.17
NUP88-211ENST00000575976 MCHR1Q99705 422 aa7.74□□□□□ -1.17
NUP88-211ENST00000575976 TIMP4Q99727 224 aa7.74□□□□□ -1.17
NUP88-211ENST00000575976 PIGQQ9BRB3 760 aa7.74□□□□□ -1.17
NUP88-211ENST00000575976 UGT2B28Q9BY64 529 aa7.74□□□□□ -1.17
NUP88-211ENST00000575976 MMADHCQ9H3L0 296 aaPredicted RBP7.74□□□□□ -1.17
NUP88-211ENST00000575976 MUC13Q9H3R2 512 aa7.74□□□□□ -1.17
NUP88-211ENST00000575976 EVA1AQ9H8M9 152 aa7.74□□□□□ -1.17
NUP88-211ENST00000575976 CTPS2Q9NRF8 586 aa7.74□□□□□ -1.17
NUP88-211ENST00000575976 TESQ9UGI8 421 aaKnown RBP7.74□□□□□ -1.17
NUP88-211ENST00000575976 SLC7A8Q9UHI5 535 aa7.74□□□□□ -1.17
NUP88-211ENST00000575976 RPS6KA6Q9UK32 745 aa7.74□□□□□ -1.17
NUP88-211ENST00000575976 SAMD4AQ9UPU9 718 aaKnown RBP7.74□□□□□ -1.17
NUP88-211ENST00000575976 POMPQ9Y244 141 aa7.74□□□□□ -1.17
NUP88-211ENST00000575976 ZNF337Q9Y3M9 751 aa7.74□□□□□ -1.17
NUP88-211ENST00000575976 V9GYQ6 96 aa7.74□□□□□ -1.17
NUP88-211ENST00000575976 CREBBPQ92793 2442 aa7.73□□□□□ -1.17
NUP88-211ENST00000575976 DOPEY2Q9Y3R5 2298 aa7.73□□□□□ -1.17
NUP88-211ENST00000575976 LRRK2Q5S007 2527 aa7.73□□□□□ -1.17
NUP88-211ENST00000575976 A0A1B0GWA3 101 aa7.73□□□□□ -1.17
NUP88-211ENST00000575976 TCRBV5S2A0A599 114 aa7.73□□□□□ -1.17
NUP88-211ENST00000575976 H3BML4 177 aa7.73□□□□□ -1.17
NUP88-211ENST00000575976 ACTL6AO96019 429 aa7.73□□□□□ -1.17
NUP88-211ENST00000575976 OPN1LWP04000 364 aa7.73□□□□□ -1.17
NUP88-211ENST00000575976 UQCRBP14927 111 aa7.73□□□□□ -1.17
NUP88-211ENST00000575976 ZNF17P17021 662 aa7.73□□□□□ -1.17
NUP88-211ENST00000575976 TACR3P29371 465 aa7.73□□□□□ -1.17
NUP88-211ENST00000575976 GCKP35557 465 aa7.73□□□□□ -1.17
NUP88-211ENST00000575976 EIF1P41567 113 aaKnown RBP7.73□□□□□ -1.17
NUP88-211ENST00000575976 SLC1A3P43003 542 aa7.73□□□□□ -1.17
NUP88-211ENST00000575976 COPZ1P61923 177 aa7.73□□□□□ -1.17
NUP88-211ENST00000575976 MERTKQ12866 999 aa7.73□□□□□ -1.17
NUP88-211ENST00000575976 MRPL49Q13405 166 aaKnown RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms