RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 TAS2R43P59537 309 aa17.64■□□□□ 0.41
SCARF1-206ENST00000573852 DEFB134Q4QY38 66 aa17.64■□□□□ 0.41
SCARF1-206ENST00000573852 DCST2Q5T1A1 773 aa17.64■□□□□ 0.41
SCARF1-206ENST00000573852 SDE2Q6IQ49 451 aa17.64■□□□□ 0.41
SCARF1-206ENST00000573852 ZNF687Q8N1G0 1237 aa17.64■□□□□ 0.41
SCARF1-206ENST00000573852 OR2M2Q96R28 347 aa17.64■□□□□ 0.41
SCARF1-206ENST00000573852 HEXA-AS1Q9H8Q6 139 aa17.64■□□□□ 0.41
SCARF1-206ENST00000573852 CXXC1Q9P0U4 656 aaPredicted RBP17.64■□□□□ 0.41
SCARF1-206ENST00000573852 TMEM5Q9Y2B1 443 aa17.64■□□□□ 0.41
SCARF1-206ENST00000573852 SLC17A4Q9Y2C5 497 aa17.64■□□□□ 0.41
SCARF1-206ENST00000573852 PPP1R3DO95685 299 aa17.63■□□□□ 0.41
SCARF1-206ENST00000573852 DBIP07108 87 aaKnown RBP17.63■□□□□ 0.41
SCARF1-206ENST00000573852 LAMP2P13473 410 aa17.63■□□□□ 0.41
SCARF1-206ENST00000573852 NUDT1P36639 197 aa17.63■□□□□ 0.41
SCARF1-206ENST00000573852 C2orf27AQ580R0 203 aa17.63■□□□□ 0.41
SCARF1-206ENST00000573852 MTFR2Q6P444 385 aa17.63■□□□□ 0.41
SCARF1-206ENST00000573852 BEST4Q8NFU0 473 aa17.63■□□□□ 0.41
SCARF1-206ENST00000573852 HAVCR2Q8TDQ0 301 aa17.63■□□□□ 0.41
SCARF1-206ENST00000573852 ST6GALNAC2Q9UJ37 374 aa17.63■□□□□ 0.41
SCARF1-206ENST00000573852 NPFFR2Q9Y5X5 522 aa17.63■□□□□ 0.41
SCARF1-206ENST00000573852 RIIAD1A6NNX1 92 aa17.63■□□□□ 0.41
SCARF1-206ENST00000573852 PTP4A3O75365 173 aa17.63■□□□□ 0.41
SCARF1-206ENST00000573852 UBL3O95164 117 aa17.63■□□□□ 0.41
SCARF1-206ENST00000573852 BMP8BP34820 402 aa17.63■□□□□ 0.41
SCARF1-206ENST00000573852 MMP15P51511 669 aa17.63■□□□□ 0.41
SCARF1-206ENST00000573852 PLAURQ03405 335 aa17.63■□□□□ 0.41
SCARF1-206ENST00000573852 BMP8AQ7Z5Y6 402 aa17.63■□□□□ 0.41
SCARF1-206ENST00000573852 CDK20Q8IZL9 346 aa17.63■□□□□ 0.41
SCARF1-206ENST00000573852 TEX19Q8NA77 164 aa17.63■□□□□ 0.41
SCARF1-206ENST00000573852 MAP6Q96JE9 813 aa17.63■□□□□ 0.41
SCARF1-206ENST00000573852 ASB16Q96NS5 453 aa17.63■□□□□ 0.41
SCARF1-206ENST00000573852 ORAI3Q9BRQ5 295 aa17.63■□□□□ 0.41
SCARF1-206ENST00000573852 USP36Q9P275 1121 aaKnown RBP17.63■□□□□ 0.41
SCARF1-206ENST00000573852 STX11O75558 287 aa17.62■□□□□ 0.41
SCARF1-206ENST00000573852 EML2O95834 649 aa17.62■□□□□ 0.41
SCARF1-206ENST00000573852 MT-ND4P03905 459 aa17.62■□□□□ 0.41
SCARF1-206ENST00000573852 RAF1P04049 648 aa17.62■□□□□ 0.41
SCARF1-206ENST00000573852 TPOP07202 933 aa17.62■□□□□ 0.41
SCARF1-206ENST00000573852 SRP54P61011 504 aaKnown RBP17.62■□□□□ 0.41
SCARF1-206ENST00000573852 RGS1Q08116 209 aa17.62■□□□□ 0.41
SCARF1-206ENST00000573852 PDGFRLQ15198 375 aa17.62■□□□□ 0.41
SCARF1-206ENST00000573852 ST3GAL2Q16842 350 aa17.62■□□□□ 0.41
SCARF1-206ENST00000573852 GSG1Q2KHT4 349 aa17.62■□□□□ 0.41
SCARF1-206ENST00000573852 AMZ1Q400G9 498 aa17.62■□□□□ 0.41
SCARF1-206ENST00000573852 TP53I3Q53FA7 332 aa17.62■□□□□ 0.41
SCARF1-206ENST00000573852 RPL13AP3Q6NVV1 102 aa17.62■□□□□ 0.41
SCARF1-206ENST00000573852 OR8H3Q8N146 312 aa17.62■□□□□ 0.41
SCARF1-206ENST00000573852 ARL14Q8N4G2 192 aa17.62■□□□□ 0.41
SCARF1-206ENST00000573852 OR51Q1Q8NH59 317 aa17.62■□□□□ 0.41
SCARF1-206ENST00000573852 OR4C6Q8NH72 309 aa17.62■□□□□ 0.41
SCARF1-206ENST00000573852 GSDMCQ9BYG8 508 aa17.62■□□□□ 0.41
SCARF1-206ENST00000573852 MED31Q9Y3C7 131 aa17.62■□□□□ 0.41
SCARF1-206ENST00000573852 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.62■□□□□ 0.41
SCARF1-206ENST00000573852 P2RX6O15547 441 aa17.62■□□□□ 0.41
SCARF1-206ENST00000573852 EPXP11678 715 aa17.62■□□□□ 0.41
SCARF1-206ENST00000573852 CPMP14384 443 aa17.62■□□□□ 0.41
SCARF1-206ENST00000573852 FHL5Q5TD97 284 aa17.62■□□□□ 0.41
SCARF1-206ENST00000573852 FBXO42Q6P3S6 717 aa17.62■□□□□ 0.41
SCARF1-206ENST00000573852 FIGNL1Q6PIW4 674 aa17.62■□□□□ 0.41
SCARF1-206ENST00000573852 VITQ6UXI7 678 aa17.62■□□□□ 0.41
SCARF1-206ENST00000573852 PRSS45Q7RTY3 260 aa17.62■□□□□ 0.41
SCARF1-206ENST00000573852 SIX5Q8N196 739 aa17.62■□□□□ 0.41
SCARF1-206ENST00000573852 GRHL3Q8TE85 626 aa17.62■□□□□ 0.41
SCARF1-206ENST00000573852 LCN9Q8WX39 176 aa17.62■□□□□ 0.41
SCARF1-206ENST00000573852 ADAMTS14Q8WXS8 1223 aa17.62■□□□□ 0.41
SCARF1-206ENST00000573852 C19orf53Q9UNZ5 99 aaPredicted RBP17.62■□□□□ 0.41
SCARF1-206ENST00000573852 TBC1D3EA0A087X179 549 aa17.61■□□□□ 0.41
SCARF1-206ENST00000573852 LINC00862A6NCI5 91 aa17.61■□□□□ 0.41
SCARF1-206ENST00000573852 RPS15AP62244 130 aaKnown RBP17.61■□□□□ 0.41
SCARF1-206ENST00000573852 TOR2AQ5JU69 321 aa17.61■□□□□ 0.41
SCARF1-206ENST00000573852 TMEFF1Q8IYR6 380 aa17.61■□□□□ 0.41
SCARF1-206ENST00000573852 MS4A15Q8N5U1 240 aa17.61■□□□□ 0.41
SCARF1-206ENST00000573852 OR6C4Q8NGE1 309 aa17.61■□□□□ 0.41
SCARF1-206ENST00000573852 TNFRSF13CQ96RJ3 184 aa17.61■□□□□ 0.41
SCARF1-206ENST00000573852 CCDC86Q9H6F5 360 aaKnown RBP17.61■□□□□ 0.41
SCARF1-206ENST00000573852 KIR3DX1Q9H7L2 352 aa17.61■□□□□ 0.41
SCARF1-206ENST00000573852 BRD7Q9NPI1 651 aa17.61■□□□□ 0.41
SCARF1-206ENST00000573852 STON1Q9Y6Q2 735 aa17.61■□□□□ 0.41
SCARF1-206ENST00000573852 CHD9Q3L8U1 2897 aa17.61■□□□□ 0.41
SCARF1-206ENST00000573852 H2AFB2P0C5Z0 115 aa17.61■□□□□ 0.41
SCARF1-206ENST00000573852 USP53Q70EK8 1073 aa17.61■□□□□ 0.41
SCARF1-206ENST00000573852 GET4Q7L5D6 327 aaPredicted RBP17.61■□□□□ 0.41
SCARF1-206ENST00000573852 THAP4Q8WY91 577 aa17.61■□□□□ 0.41
SCARF1-206ENST00000573852 RSPH9Q9H1X1 276 aaPredicted RBP17.61■□□□□ 0.41
SCARF1-206ENST00000573852 ATG2BQ96BY7 2078 aa17.6■□□□□ 0.41
SCARF1-206ENST00000573852 TRAV1-2A0A0B4J238 106 aa17.6■□□□□ 0.41
SCARF1-206ENST00000573852 ZNF860A6NHJ4 632 aa17.6■□□□□ 0.41
SCARF1-206ENST00000573852 GPR171O14626 319 aa17.6■□□□□ 0.41
SCARF1-206ENST00000573852 WNT1P04628 370 aa17.6■□□□□ 0.41
SCARF1-206ENST00000573852 ZNF3P17036 446 aa17.6■□□□□ 0.41
SCARF1-206ENST00000573852 IGFALSP35858 605 aa17.6■□□□□ 0.41
SCARF1-206ENST00000573852 SGCGQ13326 291 aa17.6■□□□□ 0.41
SCARF1-206ENST00000573852 CAMK2DQ13557 499 aa17.6■□□□□ 0.41
SCARF1-206ENST00000573852 PSRC1Q6PGN9 363 aaPredicted RBP17.6■□□□□ 0.41
SCARF1-206ENST00000573852 LUZP2Q86TE4 346 aa17.6■□□□□ 0.41
SCARF1-206ENST00000573852 IZUMO1Q8IYV9 350 aa17.6■□□□□ 0.41
SCARF1-206ENST00000573852 COX18Q8N8Q8 333 aa17.6■□□□□ 0.41
SCARF1-206ENST00000573852 NT5CQ8TCD5 201 aa17.6■□□□□ 0.41
SCARF1-206ENST00000573852 GIMAP1Q8WWP7 306 aa17.6■□□□□ 0.41
SCARF1-206ENST00000573852 SORCS2Q96PQ0 1159 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms