RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 BMP7P18075 431 aa26.66■■□□□ 1.86
CTDNEP1-208ENST00000573600 GSTT1P30711 240 aa26.66■■□□□ 1.86
CTDNEP1-208ENST00000573600 MAP2K4P45985 399 aa26.66■■□□□ 1.86
CTDNEP1-208ENST00000573600 SLC15A1P46059 708 aa26.66■■□□□ 1.86
CTDNEP1-208ENST00000573600 MASP1P48740 699 aa26.66■■□□□ 1.86
CTDNEP1-208ENST00000573600 CCR4P51679 360 aa26.66■■□□□ 1.86
CTDNEP1-208ENST00000573600 PGGHGQ32M88 737 aa26.66■■□□□ 1.86
CTDNEP1-208ENST00000573600 CLEC12AQ5QGZ9 265 aa26.66■■□□□ 1.86
CTDNEP1-208ENST00000573600 DESI1Q6ICB0 168 aa26.66■■□□□ 1.86
CTDNEP1-208ENST00000573600 CBLN3Q6UW01 205 aa26.66■■□□□ 1.86
CTDNEP1-208ENST00000573600 FCGR1BQ92637 280 aa26.66■■□□□ 1.86
CTDNEP1-208ENST00000573600 TAAR9Q96RI9 348 aa26.66■■□□□ 1.86
CTDNEP1-208ENST00000573600 DNAJC27Q9NZQ0 273 aa26.66■■□□□ 1.86
CTDNEP1-208ENST00000573600 MYO15AQ9UKN7 3530 aa26.66■■□□□ 1.86
CTDNEP1-208ENST00000573600 FADS1O60427 444 aa26.65■■□□□ 1.86
CTDNEP1-208ENST00000573600 SAGP10523 405 aaPredicted RBP26.65■■□□□ 1.86
CTDNEP1-208ENST00000573600 ETV5P41161 510 aa26.65■■□□□ 1.86
CTDNEP1-208ENST00000573600 ST3GAL4Q11206 333 aa26.65■■□□□ 1.86
CTDNEP1-208ENST00000573600 KIF26BQ2KJY2 2108 aa26.65■■□□□ 1.86
CTDNEP1-208ENST00000573600 B3GNT6Q6ZMB0 384 aa26.65■■□□□ 1.86
CTDNEP1-208ENST00000573600 CCDC81Q6ZN84 652 aa26.65■■□□□ 1.86
CTDNEP1-208ENST00000573600 FGF11Q92914 225 aa26.65■■□□□ 1.86
CTDNEP1-208ENST00000573600 SAMD8Q96LT4 415 aa26.65■■□□□ 1.86
CTDNEP1-208ENST00000573600 DDA1Q9BW61 102 aa26.65■■□□□ 1.86
CTDNEP1-208ENST00000573600 SLC19A3Q9BZV2 496 aa26.65■■□□□ 1.86
CTDNEP1-208ENST00000573600 ZBTB20Q9HC78 741 aaPredicted RBP26.65■■□□□ 1.86
CTDNEP1-208ENST00000573600 PCDHGA1Q9Y5H4 931 aa26.65■■□□□ 1.86
CTDNEP1-208ENST00000573600 SNTNA6NMZ2 147 aa26.65■■□□□ 1.86
CTDNEP1-208ENST00000573600 HCN1O60741 890 aa26.65■■□□□ 1.86
CTDNEP1-208ENST00000573600 EVI2BP34910 448 aa26.65■■□□□ 1.86
CTDNEP1-208ENST00000573600 TBCEQ15813 527 aaPredicted RBP26.65■■□□□ 1.86
CTDNEP1-208ENST00000573600 GPR107Q5VW38 600 aa26.65■■□□□ 1.86
CTDNEP1-208ENST00000573600 SLC30A6Q6NXT4 461 aa26.65■■□□□ 1.86
CTDNEP1-208ENST00000573600 MARCH3Q86UD3 253 aa26.65■■□□□ 1.86
CTDNEP1-208ENST00000573600 SLC43A2Q8N370 569 aa26.65■■□□□ 1.86
CTDNEP1-208ENST00000573600 OR2Y1Q8NGV0 311 aa26.65■■□□□ 1.86
CTDNEP1-208ENST00000573600 OR4Q3Q8NH05 313 aa26.65■■□□□ 1.86
CTDNEP1-208ENST00000573600 ISOC1Q96CN7 298 aa26.65■■□□□ 1.86
CTDNEP1-208ENST00000573600 C12orf10Q9HB07 376 aa26.65■■□□□ 1.86
CTDNEP1-208ENST00000573600 KLF7O75840 302 aaPredicted RBP26.64■■□□□ 1.85
CTDNEP1-208ENST00000573600 STK17BO94768 372 aa26.64■■□□□ 1.85
CTDNEP1-208ENST00000573600 INMTO95050 263 aa26.64■■□□□ 1.85
CTDNEP1-208ENST00000573600 UMODP07911 640 aa26.64■■□□□ 1.85
CTDNEP1-208ENST00000573600 STSP08842 583 aa26.64■■□□□ 1.85
CTDNEP1-208ENST00000573600 ZNF117Q03924 483 aa26.64■■□□□ 1.85
CTDNEP1-208ENST00000573600 CRYZQ08257 329 aaKnown RBP26.64■■□□□ 1.85
CTDNEP1-208ENST00000573600 SYT6Q5T7P8 510 aaPredicted RBP26.64■■□□□ 1.85
CTDNEP1-208ENST00000573600 MISPQ8IVT2 679 aa26.64■■□□□ 1.85
CTDNEP1-208ENST00000573600 C9orf43Q8TAL5 461 aaPredicted RBP26.64■■□□□ 1.85
CTDNEP1-208ENST00000573600 TTC28Q96AY4 2481 aa26.64■■□□□ 1.85
CTDNEP1-208ENST00000573600 LRR1Q96L50 414 aa26.64■■□□□ 1.85
CTDNEP1-208ENST00000573600 PTTG2Q9NZH5 202 aa26.64■■□□□ 1.85
CTDNEP1-208ENST00000573600 SIGLEC7Q9Y286 467 aa26.64■■□□□ 1.85
CTDNEP1-208ENST00000573600 C4orf47A7E2U8 309 aa26.63■■□□□ 1.85
CTDNEP1-208ENST00000573600 HCRTR2O43614 444 aa26.63■■□□□ 1.85
CTDNEP1-208ENST00000573600 NOL3O60936 208 aaKnown RBP26.63■■□□□ 1.85
CTDNEP1-208ENST00000573600 IGHEP01854 428 aa26.63■■□□□ 1.85
CTDNEP1-208ENST00000573600 C21orf33P30042 268 aaPredicted RBP26.63■■□□□ 1.85
CTDNEP1-208ENST00000573600 GP2P55259 537 aaKnown RBP26.63■■□□□ 1.85
CTDNEP1-208ENST00000573600 PCOLCEQ15113 449 aa26.63■■□□□ 1.85
CTDNEP1-208ENST00000573600 SYT14P1Q58G82 188 aa26.63■■□□□ 1.85
CTDNEP1-208ENST00000573600 SMARCD3Q6STE5 483 aa26.63■■□□□ 1.85
CTDNEP1-208ENST00000573600 ZNF563Q8TA94 476 aa26.63■■□□□ 1.85
CTDNEP1-208ENST00000573600 TMCO6Q96DC7 493 aa26.63■■□□□ 1.85
CTDNEP1-208ENST00000573600 PLEKHA8Q96JA3 519 aa26.63■■□□□ 1.85
CTDNEP1-208ENST00000573600 PHOX2BQ99453 314 aa26.63■■□□□ 1.85
CTDNEP1-208ENST00000573600 DOK1Q99704 481 aa26.63■■□□□ 1.85
CTDNEP1-208ENST00000573600 EXPH5Q8NEV8 1989 aa26.63■■□□□ 1.85
CTDNEP1-208ENST00000573600 TEX51A0A1B0GUA7 166 aa26.62■■□□□ 1.85
CTDNEP1-208ENST00000573600 TMEM200CA6NKL6 621 aa26.62■■□□□ 1.85
CTDNEP1-208ENST00000573600 ELOA3DA6NLF2 546 aaPredicted RBP26.62■■□□□ 1.85
CTDNEP1-208ENST00000573600 ENO4A6NNW6 628 aa26.62■■□□□ 1.85
CTDNEP1-208ENST00000573600 SURF4O15260 269 aa26.62■■□□□ 1.85
CTDNEP1-208ENST00000573600 PTP4A3O75365 173 aa26.62■■□□□ 1.85
CTDNEP1-208ENST00000573600 IGF2P01344 180 aa26.62■■□□□ 1.85
CTDNEP1-208ENST00000573600 JMJD7P0C870 316 aa26.62■■□□□ 1.85
CTDNEP1-208ENST00000573600 TMBIM6P55061 237 aa26.62■■□□□ 1.85
CTDNEP1-208ENST00000573600 CSRP2Q16527 193 aa26.62■■□□□ 1.85
CTDNEP1-208ENST00000573600 TMEM44Q2T9K0 475 aa26.62■■□□□ 1.85
CTDNEP1-208ENST00000573600 ELOA3BQ3SY89 546 aa26.62■■□□□ 1.85
CTDNEP1-208ENST00000573600 UBE2UQ5VVX9 321 aa26.62■■□□□ 1.85
CTDNEP1-208ENST00000573600 ATG4DQ86TL0 474 aaPredicted RBP26.62■■□□□ 1.85
CTDNEP1-208ENST00000573600 AMER2Q8N7J2 671 aa26.62■■□□□ 1.85
CTDNEP1-208ENST00000573600 ELOA3Q8NG57 546 aa26.62■■□□□ 1.85
CTDNEP1-208ENST00000573600 THAP3Q8WTV1 239 aaPredicted RBP26.62■■□□□ 1.85
CTDNEP1-208ENST00000573600 SGTBQ96EQ0 304 aa26.62■■□□□ 1.85
CTDNEP1-208ENST00000573600 RTN4RQ9BZR6 473 aa26.62■■□□□ 1.85
CTDNEP1-208ENST00000573600 ZNF700Q9H0M5 742 aa26.62■■□□□ 1.85
CTDNEP1-208ENST00000573600 UBQLN3Q9H347 655 aa26.62■■□□□ 1.85
CTDNEP1-208ENST00000573600 HHATLQ9HCP6 504 aa26.62■■□□□ 1.85
CTDNEP1-208ENST00000573600 CSO75390 466 aaKnown RBP26.62■■□□□ 1.85
CTDNEP1-208ENST00000573600 TRMUO75648 421 aaKnown RBP26.62■■□□□ 1.85
CTDNEP1-208ENST00000573600 NADKO95544 446 aaPredicted RBP26.62■■□□□ 1.85
CTDNEP1-208ENST00000573600 GRK5P34947 590 aa26.62■■□□□ 1.85
CTDNEP1-208ENST00000573600 FOLR3P41439 243 aa26.62■■□□□ 1.85
CTDNEP1-208ENST00000573600 SLC1A3P43003 542 aa26.62■■□□□ 1.85
CTDNEP1-208ENST00000573600 PLAG1Q6DJT9 500 aa26.62■■□□□ 1.85
CTDNEP1-208ENST00000573600 OR13C2Q8NGS9 318 aa26.62■■□□□ 1.85
CTDNEP1-208ENST00000573600 ZNF582Q96NG8 517 aaPredicted RBP26.62■■□□□ 1.85
CTDNEP1-208ENST00000573600 TMEM43Q9BTV4 400 aa26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms