RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 APOL3O95236 402 aa9.32□□□□□ -0.92
SMG6-213ENST00000573166 OSMP13725 252 aa9.32□□□□□ -0.92
SMG6-213ENST00000573166 HSD11B1P28845 292 aa9.32□□□□□ -0.92
SMG6-213ENST00000573166 GNALP38405 381 aa9.32□□□□□ -0.92
SMG6-213ENST00000573166 PLP2Q04941 152 aa9.32□□□□□ -0.92
SMG6-213ENST00000573166 MRM1Q6IN84 353 aaKnown RBP9.32□□□□□ -0.92
SMG6-213ENST00000573166 IGFN1Q86VF2 1251 aa9.32□□□□□ -0.92
SMG6-213ENST00000573166 CMIPQ8IY22 773 aa9.32□□□□□ -0.92
SMG6-213ENST00000573166 OR4N2Q8NGD1 307 aa9.32□□□□□ -0.92
SMG6-213ENST00000573166 ARSGQ96EG1 525 aa9.32□□□□□ -0.92
SMG6-213ENST00000573166 MFRPQ9BY79 579 aa9.32□□□□□ -0.92
SMG6-213ENST00000573166 NUAK2Q9H093 628 aa9.32□□□□□ -0.92
SMG6-213ENST00000573166 SLC6A13Q9NSD5 602 aa9.32□□□□□ -0.92
SMG6-213ENST00000573166 SUSD5O60279 629 aa9.32□□□□□ -0.92
SMG6-213ENST00000573166 CBFA2T3O75081 653 aa9.32□□□□□ -0.92
SMG6-213ENST00000573166 PPP1R3DO95685 299 aa9.32□□□□□ -0.92
SMG6-213ENST00000573166 MRPL3P09001 348 aaKnown RBP9.32□□□□□ -0.92
SMG6-213ENST00000573166 TACSTD2P09758 323 aa9.32□□□□□ -0.92
SMG6-213ENST00000573166 MSX1P28360 303 aa9.32□□□□□ -0.92
SMG6-213ENST00000573166 POLR2HP52434 150 aaKnown RBP9.32□□□□□ -0.92
SMG6-213ENST00000573166 PNLIPRP2P54317 469 aa9.32□□□□□ -0.92
SMG6-213ENST00000573166 WNT3P56703 355 aa9.32□□□□□ -0.92
SMG6-213ENST00000573166 RBPJQ06330 500 aa9.32□□□□□ -0.92
SMG6-213ENST00000573166 ZXDCQ2QGD7 858 aaPredicted RBP9.32□□□□□ -0.92
SMG6-213ENST00000573166 COL28A1Q2UY09 1125 aa9.32□□□□□ -0.92
SMG6-213ENST00000573166 C11orf91Q3C1V1 193 aa9.32□□□□□ -0.92
SMG6-213ENST00000573166 KLHL26Q53HC5 615 aa9.32□□□□□ -0.92
SMG6-213ENST00000573166 C1orf94Q6P1W5 598 aa9.32□□□□□ -0.92
SMG6-213ENST00000573166 ZNF836Q6ZNA1 936 aa9.32□□□□□ -0.92
SMG6-213ENST00000573166 CXXC5Q7LFL8 322 aaKnown RBP9.32□□□□□ -0.92
SMG6-213ENST00000573166 CHERPQ8IWX8 916 aaKnown RBP9.32□□□□□ -0.92
SMG6-213ENST00000573166 FAM86B1Q8N7N1 296 aa9.32□□□□□ -0.92
SMG6-213ENST00000573166 CYB561A3Q8NBI2 242 aa9.32□□□□□ -0.92
SMG6-213ENST00000573166 LRR1Q96L50 414 aa9.32□□□□□ -0.92
SMG6-213ENST00000573166 GPR87Q9BY21 358 aa9.32□□□□□ -0.92
SMG6-213ENST00000573166 AGPAT4Q9NRZ5 378 aa9.32□□□□□ -0.92
SMG6-213ENST00000573166 PILRAQ9UKJ1 303 aa9.32□□□□□ -0.92
SMG6-213ENST00000573166 KLF13Q9Y2Y9 288 aaPredicted RBP9.32□□□□□ -0.92
SMG6-213ENST00000573166 CCL27Q9Y4X3 112 aa9.32□□□□□ -0.92
SMG6-213ENST00000573166 TMED7-TICAM2A0A0A6YYA0 188 aa9.32□□□□□ -0.92
SMG6-213ENST00000573166 FRG2CA6NGY1 282 aa9.32□□□□□ -0.92
SMG6-213ENST00000573166 ACOT8O14734 319 aa9.32□□□□□ -0.92
SMG6-213ENST00000573166 EIF4E2O60573 245 aaKnown RBP9.32□□□□□ -0.92
SMG6-213ENST00000573166 LRP3O75074 770 aa9.32□□□□□ -0.92
SMG6-213ENST00000573166 SPARCP09486 303 aa9.32□□□□□ -0.92
SMG6-213ENST00000573166 DBTP11182 482 aaKnown RBP9.32□□□□□ -0.92
SMG6-213ENST00000573166 NAA10P41227 235 aaPredicted RBP9.32□□□□□ -0.92
SMG6-213ENST00000573166 EIF1P41567 113 aaKnown RBP9.32□□□□□ -0.92
SMG6-213ENST00000573166 PIGFQ07326 219 aa9.32□□□□□ -0.92
SMG6-213ENST00000573166 IL18R1Q13478 541 aa9.32□□□□□ -0.92
SMG6-213ENST00000573166 NDUFAF6Q330K2 333 aa9.32□□□□□ -0.92
SMG6-213ENST00000573166 MEDAGQ5VYS4 303 aa9.32□□□□□ -0.92
SMG6-213ENST00000573166 TMEM236Q5W0B7 351 aa9.32□□□□□ -0.92
SMG6-213ENST00000573166 OR2L13Q8N349 312 aa9.32□□□□□ -0.92
SMG6-213ENST00000573166 ZNF433Q8N7K0 673 aaPredicted RBP9.32□□□□□ -0.92
SMG6-213ENST00000573166 ZNF676Q8N7Q3 588 aa9.32□□□□□ -0.92
SMG6-213ENST00000573166 DRAXINQ8NBI3 349 aaPredicted RBP9.32□□□□□ -0.92
SMG6-213ENST00000573166 ZNF775Q96BV0 537 aaPredicted RBP9.32□□□□□ -0.92
SMG6-213ENST00000573166 TTTY10Q9BZA0 68 aa9.32□□□□□ -0.92
SMG6-213ENST00000573166 COMMD4Q9H0A8 199 aa9.32□□□□□ -0.92
SMG6-213ENST00000573166 TMED7Q9Y3B3 224 aa9.32□□□□□ -0.92
SMG6-213ENST00000573166 IER3IP1Q9Y5U9 82 aa9.32□□□□□ -0.92
SMG6-213ENST00000573166 CLDN24A6NM45 220 aa9.31□□□□□ -0.92
SMG6-213ENST00000573166 GBX2P52951 348 aaPredicted RBP9.31□□□□□ -0.92
SMG6-213ENST00000573166 AIMP2Q13155 320 aaKnown RBP9.31□□□□□ -0.92
SMG6-213ENST00000573166 FZD5Q13467 585 aa9.31□□□□□ -0.92
SMG6-213ENST00000573166 MLC1Q15049 377 aa9.31□□□□□ -0.92
SMG6-213ENST00000573166 LEG1Q6P5S2 330 aa9.31□□□□□ -0.92
SMG6-213ENST00000573166 RBM45Q8IUH3 476 aaKnown RBP9.31□□□□□ -0.92
SMG6-213ENST00000573166 GRAMD2AQ8IUY3 354 aa9.31□□□□□ -0.92
SMG6-213ENST00000573166 ERI1Q8IV48 349 aaKnown RBP9.31□□□□□ -0.92
SMG6-213ENST00000573166 SPACA9Q96E40 222 aaPredicted RBP9.31□□□□□ -0.92
SMG6-213ENST00000573166 GPER1Q99527 375 aa9.31□□□□□ -0.92
SMG6-213ENST00000573166 CCDC86Q9H6F5 360 aaKnown RBP9.31□□□□□ -0.92
SMG6-213ENST00000573166 CKLFQ9UBR5 152 aa9.31□□□□□ -0.92
SMG6-213ENST00000573166 LAMP5Q9UJQ1 280 aa9.31□□□□□ -0.92
SMG6-213ENST00000573166 GPR52Q9Y2T5 361 aa9.31□□□□□ -0.92
SMG6-213ENST00000573166 CAB39Q9Y376 341 aaPredicted RBP9.31□□□□□ -0.92
SMG6-213ENST00000573166 NOX1Q9Y5S8 564 aa9.31□□□□□ -0.92
SMG6-213ENST00000573166 TICRRQ7Z2Z1 1910 aa9.31□□□□□ -0.92
SMG6-213ENST00000573166 TRAV27A0A087WT01 109 aa9.31□□□□□ -0.92
SMG6-213ENST00000573166 AGAP5A6NIR3 686 aa9.31□□□□□ -0.92
SMG6-213ENST00000573166 TTLL8A6PVC2 850 aa9.31□□□□□ -0.92
SMG6-213ENST00000573166 ZNF670-ZNF695F2Z2N8 137 aa9.31□□□□□ -0.92
SMG6-213ENST00000573166 CD2P06729 351 aa9.31□□□□□ -0.92
SMG6-213ENST00000573166 PIGAP37287 484 aa9.31□□□□□ -0.92
SMG6-213ENST00000573166 RFC3P40938 356 aa9.31□□□□□ -0.92
SMG6-213ENST00000573166 FOXL2P58012 376 aa9.31□□□□□ -0.92
SMG6-213ENST00000573166 RSBN1Q5VWQ0 802 aaPredicted RBP9.31□□□□□ -0.92
SMG6-213ENST00000573166 SLC6A19Q695T7 634 aa9.31□□□□□ -0.92
SMG6-213ENST00000573166 HMBOX1Q6NT76 420 aa9.31□□□□□ -0.92
SMG6-213ENST00000573166 C16orf47Q6ZP98 133 aaPredicted RBP9.31□□□□□ -0.92
SMG6-213ENST00000573166 YRDCQ86U90 279 aaKnown RBP9.31□□□□□ -0.92
SMG6-213ENST00000573166 SLC22A16Q86VW1 577 aa9.31□□□□□ -0.92
SMG6-213ENST00000573166 ATCAYQ86WG3 371 aa9.31□□□□□ -0.92
SMG6-213ENST00000573166 GID4Q8IVV7 300 aa9.31□□□□□ -0.92
SMG6-213ENST00000573166 CACTIN-AS1Q8N1I8 211 aa9.31□□□□□ -0.92
SMG6-213ENST00000573166 KLHL36Q8N4N3 616 aa9.31□□□□□ -0.92
SMG6-213ENST00000573166 YIPF7Q8N8F6 280 aa9.31□□□□□ -0.92
SMG6-213ENST00000573166 CNEP1R1Q8N9A8 125 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms