RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 STAC2Q6ZMT1 411 aa15.44■□□□□ 0.06
SMG6-212ENST00000573153 EIF3MQ7L2H7 374 aaKnown RBP15.44■□□□□ 0.06
SMG6-212ENST00000573153 RNF130Q86XS8 419 aa15.44■□□□□ 0.06
SMG6-212ENST00000573153 ZNF619Q8N2I2 560 aa15.44■□□□□ 0.06
SMG6-212ENST00000573153 ZNF614Q8N883 585 aa15.44■□□□□ 0.06
SMG6-212ENST00000573153 LRRC8CQ8TDW0 803 aa15.44■□□□□ 0.06
SMG6-212ENST00000573153 ABHD3Q8WU67 409 aa15.44■□□□□ 0.06
SMG6-212ENST00000573153 ROBO4Q8WZ75 1007 aa15.44■□□□□ 0.06
SMG6-212ENST00000573153 ST8SIA1Q92185 356 aa15.44■□□□□ 0.06
SMG6-212ENST00000573153 OSTF1Q92882 214 aa15.44■□□□□ 0.06
SMG6-212ENST00000573153 ALPK1Q96QP1 1244 aa15.44■□□□□ 0.06
SMG6-212ENST00000573153 DLL4Q9NR61 685 aa15.44■□□□□ 0.06
SMG6-212ENST00000573153 C6orf203Q9P0P8 240 aaPredicted RBP15.44■□□□□ 0.06
SMG6-212ENST00000573153 PROCRQ9UNN8 238 aa15.44■□□□□ 0.06
SMG6-212ENST00000573153 PRR14LQ5THK1 2151 aa15.43■□□□□ 0.06
SMG6-212ENST00000573153 ZFHX3Q15911 3703 aa15.43■□□□□ 0.06
SMG6-212ENST00000573153 MTORP42345 2549 aa15.43■□□□□ 0.06
SMG6-212ENST00000573153 RFXANKO14593 260 aa15.43■□□□□ 0.06
SMG6-212ENST00000573153 KRT75O95678 551 aa15.43■□□□□ 0.06
SMG6-212ENST00000573153 NUDT14O95848 222 aa15.43■□□□□ 0.06
SMG6-212ENST00000573153 CSTAP01040 98 aa15.43■□□□□ 0.06
SMG6-212ENST00000573153 POU2F1P14859 743 aa15.43■□□□□ 0.06
SMG6-212ENST00000573153 SELENBP1Q13228 472 aa15.43■□□□□ 0.06
SMG6-212ENST00000573153 LRRC74BQ6ZQY2 392 aa15.43■□□□□ 0.06
SMG6-212ENST00000573153 ZNF621Q6ZSS3 439 aa15.43■□□□□ 0.06
SMG6-212ENST00000573153 HMGN2P46Q86SG4 172 aa15.43■□□□□ 0.06
SMG6-212ENST00000573153 CXorf67Q86X51 503 aaPredicted RBP15.43■□□□□ 0.06
SMG6-212ENST00000573153 ZFP90Q8TF47 636 aa15.43■□□□□ 0.06
SMG6-212ENST00000573153 STON2Q8WXE9 905 aa15.43■□□□□ 0.06
SMG6-212ENST00000573153 QRSL1Q9H0R6 528 aaKnown RBP15.43■□□□□ 0.06
SMG6-212ENST00000573153 SLC38A1Q9H2H9 487 aa15.43■□□□□ 0.06
SMG6-212ENST00000573153 EXOSC3Q9NQT5 275 aaKnown RBP15.43■□□□□ 0.06
SMG6-212ENST00000573153 ARGLU1Q9NWB6 273 aaPredicted RBP15.43■□□□□ 0.06
SMG6-212ENST00000573153 FAM234BA2RU67 622 aa15.42■□□□□ 0.06
SMG6-212ENST00000573153 DIAPH2O60879 1101 aa15.42■□□□□ 0.06
SMG6-212ENST00000573153 GCM2O75603 506 aaPredicted RBP15.42■□□□□ 0.06
SMG6-212ENST00000573153 SYNGR4O95473 234 aa15.42■□□□□ 0.06
SMG6-212ENST00000573153 RAF1P04049 648 aa15.42■□□□□ 0.06
SMG6-212ENST00000573153 CHRM4P08173 479 aa15.42■□□□□ 0.06
SMG6-212ENST00000573153 HOXB9P17482 250 aaPredicted RBP15.42■□□□□ 0.06
SMG6-212ENST00000573153 RPS4Y1P22090 263 aaKnown RBP15.42■□□□□ 0.06
SMG6-212ENST00000573153 EDNRAP25101 427 aa15.42■□□□□ 0.06
SMG6-212ENST00000573153 POLR2JP52435 117 aaKnown RBP15.42■□□□□ 0.06
SMG6-212ENST00000573153 CARD18P57730 90 aa15.42■□□□□ 0.06
SMG6-212ENST00000573153 IRX1P78414 480 aaPredicted RBP15.42■□□□□ 0.06
SMG6-212ENST00000573153 CHRNEQ04844 493 aa15.42■□□□□ 0.06
SMG6-212ENST00000573153 COX20Q5RI15 118 aa15.42■□□□□ 0.06
SMG6-212ENST00000573153 SEZ6L2Q6UXD5 910 aa15.42■□□□□ 0.06
SMG6-212ENST00000573153 TFAP2EQ6VUC0 442 aa15.42■□□□□ 0.06
SMG6-212ENST00000573153 NUFIP2Q7Z417 695 aaKnown RBP15.42■□□□□ 0.06
SMG6-212ENST00000573153 CMIPQ8IY22 773 aa15.42■□□□□ 0.06
SMG6-212ENST00000573153 MIER2Q8N344 545 aa15.42■□□□□ 0.06
SMG6-212ENST00000573153 ANKFN1Q8N957 763 aa15.42■□□□□ 0.06
SMG6-212ENST00000573153 IGFBPL1Q8WX77 278 aa15.42■□□□□ 0.06
SMG6-212ENST00000573153 CPNE4Q96A23 557 aaPredicted RBP15.42■□□□□ 0.06
SMG6-212ENST00000573153 CCDC28BQ9BUN5 200 aa15.42■□□□□ 0.06
SMG6-212ENST00000573153 THUMPD3Q9BV44 507 aaKnown RBP15.42■□□□□ 0.06
SMG6-212ENST00000573153 RMND5AQ9H871 391 aa15.42■□□□□ 0.06
SMG6-212ENST00000573153 GP6Q9HCN6 339 aa15.42■□□□□ 0.06
SMG6-212ENST00000573153 SLCO1B3Q9NPD5 702 aa15.42■□□□□ 0.06
SMG6-212ENST00000573153 TIGARQ9NQ88 270 aa15.42■□□□□ 0.06
SMG6-212ENST00000573153 TCF7L2Q9NQB0 619 aa15.42■□□□□ 0.06
SMG6-212ENST00000573153 TMEM45AQ9NWC5 275 aa15.42■□□□□ 0.06
SMG6-212ENST00000573153 PRDM4Q9UKN5 801 aa15.42■□□□□ 0.06
SMG6-212ENST00000573153 EMC9Q9Y3B6 208 aa15.42■□□□□ 0.06
SMG6-212ENST00000573153 FREM1Q5H8C1 2179 aa15.41■□□□□ 0.06
SMG6-212ENST00000573153 A0A1W2PNR3 127 aa15.41■□□□□ 0.06
SMG6-212ENST00000573153 AGAP5A6NIR3 686 aa15.41■□□□□ 0.06
SMG6-212ENST00000573153 C16orf97H3BN30 126 aa15.41■□□□□ 0.06
SMG6-212ENST00000573153 SMAD9O15198 467 aaKnown RBP15.41■□□□□ 0.06
SMG6-212ENST00000573153 KLF4O43474 513 aa15.41■□□□□ 0.06
SMG6-212ENST00000573153 PABPC4LP0CB38 370 aaKnown RBP15.41■□□□□ 0.06
SMG6-212ENST00000573153 PGCP20142 388 aa15.41■□□□□ 0.06
SMG6-212ENST00000573153 ENPP1P22413 925 aa15.41■□□□□ 0.06
SMG6-212ENST00000573153 SESN3P58005 492 aa15.41■□□□□ 0.06
SMG6-212ENST00000573153 HPCAP84074 193 aa15.41■□□□□ 0.06
SMG6-212ENST00000573153 SYPL1Q16563 259 aa15.41■□□□□ 0.06
SMG6-212ENST00000573153 TMEM176BQ3YBM2 270 aaPredicted RBP15.41■□□□□ 0.06
SMG6-212ENST00000573153 GTDC1Q4AE62 458 aa15.41■□□□□ 0.06
SMG6-212ENST00000573153 GTF2IRD2BQ6EKJ0 949 aa15.41■□□□□ 0.06
SMG6-212ENST00000573153 C3orf33Q6P1S2 294 aa15.41■□□□□ 0.06
SMG6-212ENST00000573153 PLEKHM3Q6ZWE6 761 aa15.41■□□□□ 0.06
SMG6-212ENST00000573153 GTF2IRD2Q86UP8 949 aa15.41■□□□□ 0.06
SMG6-212ENST00000573153 TGIF2LYQ8IUE0 185 aa15.41■□□□□ 0.06
SMG6-212ENST00000573153 GABRG1Q8N1C3 465 aa15.41■□□□□ 0.06
SMG6-212ENST00000573153 TMCO5AQ8N6Q1 288 aa15.41■□□□□ 0.06
SMG6-212ENST00000573153 OR9I1Q8NGQ6 314 aa15.41■□□□□ 0.06
SMG6-212ENST00000573153 RFWD2Q8NHY2 731 aa15.41■□□□□ 0.06
SMG6-212ENST00000573153 TMEM234Q8WY98 164 aa15.41■□□□□ 0.06
SMG6-212ENST00000573153 ITCHQ96J02 903 aa15.41■□□□□ 0.06
SMG6-212ENST00000573153 PSD2Q9BQI7 771 aa15.41■□□□□ 0.06
SMG6-212ENST00000573153 SLC39A3Q9BRY0 314 aa15.41■□□□□ 0.06
SMG6-212ENST00000573153 CCDC106Q9BWC9 280 aa15.41■□□□□ 0.06
SMG6-212ENST00000573153 PRRG4Q9BZD6 226 aa15.41■□□□□ 0.06
SMG6-212ENST00000573153 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.41■□□□□ 0.06
SMG6-212ENST00000573153 ACER3Q9NUN7 267 aa15.41■□□□□ 0.06
SMG6-212ENST00000573153 KLHL13Q9P2N7 655 aa15.41■□□□□ 0.06
SMG6-212ENST00000573153 NDRG3Q9UGV2 375 aa15.41■□□□□ 0.06
SMG6-212ENST00000573153 DSPPQ9NZW4 1301 aa15.41■□□□□ 0.06
SMG6-212ENST00000573153 POLR3GO15318 223 aaPredicted RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms