RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 CLDN20P56880 219 aa4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 PAX2Q02962 417 aa4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 ZNF33AQ06730 810 aa4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 MGAT3Q09327 533 aa4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 ZP4Q12836 540 aa4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 KLRB1Q12918 225 aa4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 ZBTB6Q15916 424 aa4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 ZNF77Q15935 545 aa4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 GUK1Q16774 197 aa4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 KCTD19Q17RG1 926 aaPredicted RBP4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 MS4A18Q3C1V0 323 aa4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 CCDC153Q494R4 210 aa4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 RAB6CQ53S08 254 aa4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 NKAPLQ5M9Q1 402 aa4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 BEND6Q5SZJ8 279 aaPredicted RBP4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 IDNKQ5T6J7 187 aa4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 LEG1Q6P5S2 330 aa4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 PAQR6Q6TCH4 344 aa4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 ENPP6Q6UWR7 440 aa4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 METTL7BQ6UX53 244 aa4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 TMEM64Q6YI46 380 aa4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 RBM44Q6ZP01 1051 aaKnown RBP4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 ABHD13Q7L211 337 aa4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 NIPA1Q7RTP0 329 aa4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 SLC29A4Q7RTT9 530 aa4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 SMIM15Q7Z3B0 74 aa4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 TFAP2DQ7Z6R9 452 aa4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 ZC3H3Q8IXZ2 948 aaKnown RBP4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 CYP4Z2PQ8N1L4 340 aa4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 CENPSQ8N2Z9 138 aa4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 CPSF7Q8N684 471 aaKnown RBP4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 LRRC57Q8N9N7 239 aa4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 CCDC71LQ8N9Z2 235 aa4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 TERB1Q8NA31 727 aa4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 ADAD2Q8NCV1 583 aaKnown RBP4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 ZNF738Q8NE65 137 aa4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 OR5B17Q8NGF7 314 aa4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 OR6X1Q8NH79 312 aa4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 ISOC2Q96AB3 205 aa4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 TMEM18Q96B42 140 aa4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 BPIFA2Q96DR5 249 aa4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 TOX2Q96NM4 488 aa4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 MAPKAP1Q9BPZ7 522 aa4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 ECSITQ9BQ95 431 aa4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 UTP23Q9BRU9 249 aaKnown RBP4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 WACQ9BTA9 647 aa4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 ALOXE3Q9BYJ1 711 aa4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 CIPCQ9C0C6 399 aa4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 VN1R1Q9GZP7 353 aa4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 RAB6CQ9H0N0 254 aa4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 CPVLQ9H3G5 476 aa4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 HRASLSQ9HDD0 168 aa4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 STARD5Q9NSY2 213 aa4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 C19orf73Q9NVV2 129 aa4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 RNF186Q9NXI6 227 aa4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 ZNF319Q9P2F9 582 aa4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 EIF3KQ9UBQ5 218 aaKnown RBP4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 ANAPC7Q9UJX3 599 aa4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 WIF1Q9Y5W5 379 aa4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 V9GYY9 64 aa4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 A0A1W2PP11 408 aa4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 C15orf62A8K5M9 175 aa4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 TMEM238C9JI98 176 aa4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 F5H6K3 240 aa4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 H3BMH7 237 aa4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 M0QXV9 152 aa4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 PDHXO00330 501 aa4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 CCSO14618 274 aa4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 IMPA2O14732 288 aa4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 SH2D1BO14796 132 aa4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 WNT9BO14905 357 aa4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 SLC16A4O15374 487 aa4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 VAMP5O95183 116 aa4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 GCP02774 474 aa4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 ADRB1P08588 477 aa4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 GNAO1P09471 354 aa4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 CT62P0C5K7 136 aa4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 CD8BP10966 210 aa4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 CBR1P16152 277 aa4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 S100A1P23297 94 aa4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 CMA1P23946 247 aa4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 EPHA2P29317 976 aa4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 CALCRP30988 508 aa4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 CD79BP40259 229 aa4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 TNFSF9P41273 254 aa4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 SLC1A1P43005 524 aa4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 DNASE1L1P49184 302 aa4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 KPNA2P52292 529 aaKnown RBP4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 HNRNPH2P55795 449 aaKnown RBP4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 ERVS71-1P61550 626 aa4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 ERVK11-1P61568 191 aa4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 PITX1P78337 314 aaPredicted RBP4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 OC90Q02509 493 aaPredicted RBP4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 ST3GAL1Q11201 340 aa4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 BNIP2Q12982 314 aa4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 PDIA2Q13087 525 aaKnown RBP4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 ITGA9Q13797 1035 aa4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 DPYSL3Q14195 570 aa4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 TMEM249Q2WGJ8 235 aa4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 TIGD2Q4W5G0 525 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms