RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 SAXO2Q658L1 398 aa16.08■□□□□ 0.16
CHD3-214ENST00000572579 GTF2IRD2BQ6EKJ0 949 aa16.08■□□□□ 0.16
CHD3-214ENST00000572579 TNFAIP8L2Q6P589 184 aaPredicted RBP16.08■□□□□ 0.16
CHD3-214ENST00000572579 PRSS57Q6UWY2 283 aa16.08■□□□□ 0.16
CHD3-214ENST00000572579 C20orf204Q6ZNR8 217 aa16.08■□□□□ 0.16
CHD3-214ENST00000572579 YTHDF3Q7Z739 585 aaKnown RBP16.08■□□□□ 0.16
CHD3-214ENST00000572579 GTF2IRD2Q86UP8 949 aa16.08■□□□□ 0.16
CHD3-214ENST00000572579 P3H2Q8IVL5 708 aa16.08■□□□□ 0.16
CHD3-214ENST00000572579 FAM71CQ8NEG0 241 aa16.08■□□□□ 0.16
CHD3-214ENST00000572579 OR4A15Q8NGL6 344 aa16.08■□□□□ 0.16
CHD3-214ENST00000572579 COX4I2Q96KJ9 171 aa16.08■□□□□ 0.16
CHD3-214ENST00000572579 PSD2Q9BQI7 771 aa16.08■□□□□ 0.16
CHD3-214ENST00000572579 SAP130Q9H0E3 1048 aa16.08■□□□□ 0.16
CHD3-214ENST00000572579 OR10A4Q9H209 315 aa16.08■□□□□ 0.16
CHD3-214ENST00000572579 RAB21Q9UL25 225 aa16.08■□□□□ 0.16
CHD3-214ENST00000572579 FREM1Q5H8C1 2179 aa16.08■□□□□ 0.16
CHD3-214ENST00000572579 SMAD9O15198 467 aaKnown RBP16.07■□□□□ 0.16
CHD3-214ENST00000572579 CYP7B1O75881 506 aa16.07■□□□□ 0.16
CHD3-214ENST00000572579 CPSF4O95639 269 aaKnown RBP16.07■□□□□ 0.16
CHD3-214ENST00000572579 ADAP00813 363 aa16.07■□□□□ 0.16
CHD3-214ENST00000572579 MYZAPP0CAP1 466 aa16.07■□□□□ 0.16
CHD3-214ENST00000572579 NTF4P34130 210 aa16.07■□□□□ 0.16
CHD3-214ENST00000572579 SELENBP1Q13228 472 aa16.07■□□□□ 0.16
CHD3-214ENST00000572579 TAB1Q15750 504 aa16.07■□□□□ 0.16
CHD3-214ENST00000572579 TMEM201Q5SNT2 666 aa16.07■□□□□ 0.16
CHD3-214ENST00000572579 SFRP5Q5T4F7 317 aa16.07■□□□□ 0.16
CHD3-214ENST00000572579 ALKBH2Q6NS38 261 aa16.07■□□□□ 0.16
CHD3-214ENST00000572579 TMCO5AQ8N6Q1 288 aa16.07■□□□□ 0.16
CHD3-214ENST00000572579 XAGE5Q8WWM1 108 aa16.07■□□□□ 0.16
CHD3-214ENST00000572579 TESCQ96BS2 214 aa16.07■□□□□ 0.16
CHD3-214ENST00000572579 SLC35G5Q96KT7 338 aa16.07■□□□□ 0.16
CHD3-214ENST00000572579 ZNF300Q96RE9 604 aaPredicted RBP16.07■□□□□ 0.16
CHD3-214ENST00000572579 GSX2Q9BZM3 304 aa16.07■□□□□ 0.16
CHD3-214ENST00000572579 DPY30Q9C005 99 aa16.07■□□□□ 0.16
CHD3-214ENST00000572579 BCO1Q9HAY6 547 aa16.07■□□□□ 0.16
CHD3-214ENST00000572579 TIGARQ9NQ88 270 aa16.07■□□□□ 0.16
CHD3-214ENST00000572579 PRSS50Q9UI38 385 aa16.07■□□□□ 0.16
CHD3-214ENST00000572579 HEATR5AQ86XA9 2040 aa16.07■□□□□ 0.16
CHD3-214ENST00000572579 DUXAA6NLW8 204 aa16.06■□□□□ 0.16
CHD3-214ENST00000572579 GJE1A6NN92 205 aa16.06■□□□□ 0.16
CHD3-214ENST00000572579 ARHGEF9O43307 516 aa16.06■□□□□ 0.16
CHD3-214ENST00000572579 KIAA0513O60268 411 aa16.06■□□□□ 0.16
CHD3-214ENST00000572579 GUSBP08236 651 aa16.06■□□□□ 0.16
CHD3-214ENST00000572579 PABPC4LP0CB38 370 aaKnown RBP16.06■□□□□ 0.16
CHD3-214ENST00000572579 UBTFL6P0CB48 400 aaPredicted RBP16.06■□□□□ 0.16
CHD3-214ENST00000572579 PAX1P15863 534 aa16.06■□□□□ 0.16
CHD3-214ENST00000572579 UQCRC2P22695 453 aa16.06■□□□□ 0.16
CHD3-214ENST00000572579 ADSLP30566 484 aaPredicted RBP16.06■□□□□ 0.16
CHD3-214ENST00000572579 PTH2RP49190 550 aa16.06■□□□□ 0.16
CHD3-214ENST00000572579 CCR4P51679 360 aa16.06■□□□□ 0.16
CHD3-214ENST00000572579 NME5P56597 212 aa16.06■□□□□ 0.16
CHD3-214ENST00000572579 WDR4P57081 412 aaKnown RBP16.06■□□□□ 0.16
CHD3-214ENST00000572579 UFM1P61960 85 aa16.06■□□□□ 0.16
CHD3-214ENST00000572579 BST1Q10588 318 aa16.06■□□□□ 0.16
CHD3-214ENST00000572579 CBFBQ13951 182 aa16.06■□□□□ 0.16
CHD3-214ENST00000572579 BHLHB9Q6PI77 547 aa16.06■□□□□ 0.16
CHD3-214ENST00000572579 CLEC9AQ6UXN8 241 aa16.06■□□□□ 0.16
CHD3-214ENST00000572579 FRRS1Q6ZNA5 592 aa16.06■□□□□ 0.16
CHD3-214ENST00000572579 PLEKHM3Q6ZWE6 761 aa16.06■□□□□ 0.16
CHD3-214ENST00000572579 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.06■□□□□ 0.16
CHD3-214ENST00000572579 STK32CQ86UX6 486 aa16.06■□□□□ 0.16
CHD3-214ENST00000572579 ZNF619Q8N2I2 560 aa16.06■□□□□ 0.16
CHD3-214ENST00000572579 TOR1AIP2Q8NFQ8 470 aa16.06■□□□□ 0.16
CHD3-214ENST00000572579 NEUROG1Q92886 237 aa16.06■□□□□ 0.16
CHD3-214ENST00000572579 NEURL3Q96EH8 262 aa16.06■□□□□ 0.16
CHD3-214ENST00000572579 OR5B2Q96R09 309 aa16.06■□□□□ 0.16
CHD3-214ENST00000572579 INPP5KQ9BT40 448 aa16.06■□□□□ 0.16
CHD3-214ENST00000572579 CCDC106Q9BWC9 280 aa16.06■□□□□ 0.16
CHD3-214ENST00000572579 MEAF6Q9HAF1 191 aa16.06■□□□□ 0.16
CHD3-214ENST00000572579 GP6Q9HCN6 339 aa16.06■□□□□ 0.16
CHD3-214ENST00000572579 ACER3Q9NUN7 267 aa16.06■□□□□ 0.16
CHD3-214ENST00000572579 ZNF701Q9NV72 531 aaPredicted RBP16.06■□□□□ 0.16
CHD3-214ENST00000572579 TLN2Q9Y4G6 2542 aa16.06■□□□□ 0.16
CHD3-214ENST00000572579 SDHDO14521 159 aa16.05■□□□□ 0.16
CHD3-214ENST00000572579 HS3ST1O14792 307 aa16.05■□□□□ 0.16
CHD3-214ENST00000572579 TM9SF1O15321 606 aa16.05■□□□□ 0.16
CHD3-214ENST00000572579 CYTIPO60759 359 aa16.05■□□□□ 0.16
CHD3-214ENST00000572579 AK1P00568 194 aa16.05■□□□□ 0.16
CHD3-214ENST00000572579 CSTAP01040 98 aa16.05■□□□□ 0.16
CHD3-214ENST00000572579 LBPP18428 481 aa16.05■□□□□ 0.16
CHD3-214ENST00000572579 CDKN2CP42773 168 aa16.05■□□□□ 0.16
CHD3-214ENST00000572579 CHRNEQ04844 493 aa16.05■□□□□ 0.16
CHD3-214ENST00000572579 STX3Q13277 289 aa16.05■□□□□ 0.16
CHD3-214ENST00000572579 CEP85LQ5SZL2 805 aa16.05■□□□□ 0.16
CHD3-214ENST00000572579 STEAP2Q8NFT2 490 aa16.05■□□□□ 0.16
CHD3-214ENST00000572579 AKAP1Q92667 903 aaKnown RBP eCLIP16.05■□□□□ 0.16
CHD3-214ENST00000572579 ROPN1LQ96C74 230 aa16.05■□□□□ 0.16
CHD3-214ENST00000572579 DNAJA3Q96EY1 480 aa16.05■□□□□ 0.16
CHD3-214ENST00000572579 REXO5Q96IC2 774 aaKnown RBP16.05■□□□□ 0.16
CHD3-214ENST00000572579 HDHD5Q9BXW7 423 aa16.05■□□□□ 0.16
CHD3-214ENST00000572579 DSCAMO60469 2012 aa16.05■□□□□ 0.16
CHD3-214ENST00000572579 DPRXA6NFQ7 191 aa16.04■□□□□ 0.16
CHD3-214ENST00000572579 HMGN4O00479 90 aa16.04■□□□□ 0.16
CHD3-214ENST00000572579 RAMP1O60894 148 aa16.04■□□□□ 0.16
CHD3-214ENST00000572579 OR3A2P47893 321 aa16.04■□□□□ 0.16
CHD3-214ENST00000572579 DIO1P49895 249 aa16.04■□□□□ 0.16
CHD3-214ENST00000572579 NR1H2P55055 460 aa16.04■□□□□ 0.16
CHD3-214ENST00000572579 RASGEF1BQ0VAM2 473 aa16.04■□□□□ 0.16
CHD3-214ENST00000572579 MERTKQ12866 999 aa16.04■□□□□ 0.16
CHD3-214ENST00000572579 MAPK11Q15759 364 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms