RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 ZNF136P52737 540 aa6.28□□□□□ -1.4
SMG6-209ENST00000571442 CASP6P55212 293 aa6.28□□□□□ -1.4
SMG6-209ENST00000571442 SUMO3P55854 103 aaPredicted RBP6.28□□□□□ -1.4
SMG6-209ENST00000571442 DLX5P56178 289 aa6.28□□□□□ -1.4
SMG6-209ENST00000571442 EPS8Q12929 822 aa6.28□□□□□ -1.4
SMG6-209ENST00000571442 CBFBQ13951 182 aa6.28□□□□□ -1.4
SMG6-209ENST00000571442 MAPRE2Q15555 327 aa6.28□□□□□ -1.4
SMG6-209ENST00000571442 DUSP7Q16829 419 aa6.28□□□□□ -1.4
SMG6-209ENST00000571442 MMEL1Q495T6 779 aa6.28□□□□□ -1.4
SMG6-209ENST00000571442 GLYR1Q49A26 553 aaPredicted RBP6.28□□□□□ -1.4
SMG6-209ENST00000571442 LIN52Q52LA3 116 aa6.28□□□□□ -1.4
SMG6-209ENST00000571442 RNF220Q5VTB9 566 aa6.28□□□□□ -1.4
SMG6-209ENST00000571442 NSUN5P2Q63ZY6 315 aa6.28□□□□□ -1.4
SMG6-209ENST00000571442 REEP3Q6NUK4 255 aa6.28□□□□□ -1.4
SMG6-209ENST00000571442 AAGABQ6PD74 315 aa6.28□□□□□ -1.4
SMG6-209ENST00000571442 B3GNT6Q6ZMB0 384 aa6.28□□□□□ -1.4
SMG6-209ENST00000571442 PLEKHM3Q6ZWE6 761 aa6.28□□□□□ -1.4
SMG6-209ENST00000571442 EIF3MQ7L2H7 374 aaKnown RBP6.28□□□□□ -1.4
SMG6-209ENST00000571442 ADGRG3Q86Y34 549 aa6.28□□□□□ -1.4
SMG6-209ENST00000571442 PEX5LQ8IYB4 626 aa6.28□□□□□ -1.4
SMG6-209ENST00000571442 FITM2Q8N6M3 262 aa6.28□□□□□ -1.4
SMG6-209ENST00000571442 SMYD1Q8NB12 490 aa6.28□□□□□ -1.4
SMG6-209ENST00000571442 RELL2Q8NC24 303 aaPredicted RBP6.28□□□□□ -1.4
SMG6-209ENST00000571442 HIPK4Q8NE63 616 aa6.28□□□□□ -1.4
SMG6-209ENST00000571442 ATP6V1C2Q8NEY4 427 aa6.28□□□□□ -1.4
SMG6-209ENST00000571442 TOR1AIP2Q8NFQ8 470 aa6.28□□□□□ -1.4
SMG6-209ENST00000571442 OR8J3Q8NGG0 315 aa6.28□□□□□ -1.4
SMG6-209ENST00000571442 BBS10Q8TAM1 723 aa6.28□□□□□ -1.4
SMG6-209ENST00000571442 ZPLD1Q8TCW7 415 aa6.28□□□□□ -1.4
SMG6-209ENST00000571442 ZBTB8AQ96BR9 441 aa6.28□□□□□ -1.4
SMG6-209ENST00000571442 TAMM41Q96BW9 452 aa6.28□□□□□ -1.4
SMG6-209ENST00000571442 SDCCAG3Q96C92 435 aa6.28□□□□□ -1.4
SMG6-209ENST00000571442 PIGQQ9BRB3 760 aa6.28□□□□□ -1.4
SMG6-209ENST00000571442 RAD21L1Q9H4I0 556 aa6.28□□□□□ -1.4
SMG6-209ENST00000571442 EXOSC3Q9NQT5 275 aaKnown RBP6.28□□□□□ -1.4
SMG6-209ENST00000571442 CTPS2Q9NRF8 586 aa6.28□□□□□ -1.4
SMG6-209ENST00000571442 SLC35A3Q9Y2D2 325 aa6.28□□□□□ -1.4
SMG6-209ENST00000571442 ARL2BPQ9Y2Y0 163 aa6.28□□□□□ -1.4
SMG6-209ENST00000571442 ABCA12Q86UK0 2595 aa6.28□□□□□ -1.4
SMG6-209ENST00000571442 CRYBG3Q68DQ2 2970 aa6.27□□□□□ -1.41
SMG6-209ENST00000571442 TMEM72A0PK05 275 aa6.27□□□□□ -1.41
SMG6-209ENST00000571442 ZC3H12DA2A288 527 aaKnown RBP6.27□□□□□ -1.41
SMG6-209ENST00000571442 NKX2-6A6NCS4 301 aa6.27□□□□□ -1.41
SMG6-209ENST00000571442 MBD3L4A6NDZ8 208 aaPredicted RBP6.27□□□□□ -1.41
SMG6-209ENST00000571442 MBD3L3A6NE82 208 aaPredicted RBP6.27□□□□□ -1.41
SMG6-209ENST00000571442 MBD3L5A6NJ08 208 aaPredicted RBP6.27□□□□□ -1.41
SMG6-209ENST00000571442 CD8B2A6NJW9 211 aa6.27□□□□□ -1.41
SMG6-209ENST00000571442 FAM90A27PA6NNH2 459 aa6.27□□□□□ -1.41
SMG6-209ENST00000571442 FAM220BPB1ANY3 271 aa6.27□□□□□ -1.41
SMG6-209ENST00000571442 H3BNH8 94 aa6.27□□□□□ -1.41
SMG6-209ENST00000571442 M0QX08 132 aa6.27□□□□□ -1.41
SMG6-209ENST00000571442 EIF1AYO14602 144 aaKnown RBP6.27□□□□□ -1.41
SMG6-209ENST00000571442 ADAMDEC1O15204 470 aa6.27□□□□□ -1.41
SMG6-209ENST00000571442 CXCL13O43927 109 aa6.27□□□□□ -1.41
SMG6-209ENST00000571442 GABRA1P14867 456 aa6.27□□□□□ -1.41
SMG6-209ENST00000571442 ETS2P15036 469 aa6.27□□□□□ -1.41
SMG6-209ENST00000571442 CCNA2P20248 432 aa6.27□□□□□ -1.41
SMG6-209ENST00000571442 TNFRSF1BP20333 461 aa6.27□□□□□ -1.41
SMG6-209ENST00000571442 FUT4P22083 530 aa6.27□□□□□ -1.41
SMG6-209ENST00000571442 PRDX6P30041 224 aa6.27□□□□□ -1.41
SMG6-209ENST00000571442 PCGF2P35227 344 aa6.27□□□□□ -1.41
SMG6-209ENST00000571442 NUDT2P50583 147 aa6.27□□□□□ -1.41
SMG6-209ENST00000571442 SLC7A2P52569 658 aa6.27□□□□□ -1.41
SMG6-209ENST00000571442 RAC1P63000 192 aa6.27□□□□□ -1.41
SMG6-209ENST00000571442 TFF3Q07654 80 aa6.27□□□□□ -1.41
SMG6-209ENST00000571442 MERTKQ12866 999 aa6.27□□□□□ -1.41
SMG6-209ENST00000571442 BNIP2Q12982 314 aa6.27□□□□□ -1.41
SMG6-209ENST00000571442 NPTX1Q15818 432 aa6.27□□□□□ -1.41
SMG6-209ENST00000571442 BCL2A1Q16548 175 aa6.27□□□□□ -1.41
SMG6-209ENST00000571442 CYP51A1Q16850 503 aa6.27□□□□□ -1.41
SMG6-209ENST00000571442 VMACQ2NL98 169 aa6.27□□□□□ -1.41
SMG6-209ENST00000571442 ZNF311Q5JNZ3 666 aa6.27□□□□□ -1.41
SMG6-209ENST00000571442 PRAMEF8Q5VWM4 474 aa6.27□□□□□ -1.41
SMG6-209ENST00000571442 PRAMEF7Q5VXH5 474 aa6.27□□□□□ -1.41
SMG6-209ENST00000571442 FAM91A1Q658Y4 838 aa6.27□□□□□ -1.41
SMG6-209ENST00000571442 DHRS4L2Q6PKH6 230 aa6.27□□□□□ -1.41
SMG6-209ENST00000571442 ENPP6Q6UWR7 440 aa6.27□□□□□ -1.41
SMG6-209ENST00000571442 RBM45Q8IUH3 476 aaKnown RBP6.27□□□□□ -1.41
SMG6-209ENST00000571442 GRAMD2AQ8IUY3 354 aa6.27□□□□□ -1.41
SMG6-209ENST00000571442 CMIPQ8IY22 773 aa6.27□□□□□ -1.41
SMG6-209ENST00000571442 PM20D2Q8IYS1 436 aa6.27□□□□□ -1.41
SMG6-209ENST00000571442 ZNF808Q8N4W9 903 aaPredicted RBP6.27□□□□□ -1.41
SMG6-209ENST00000571442 METTL25Q8N6Q8 603 aa6.27□□□□□ -1.41
SMG6-209ENST00000571442 ANKS4BQ8N8V4 417 aa6.27□□□□□ -1.41
SMG6-209ENST00000571442 C11orf65Q8NCR3 313 aa6.27□□□□□ -1.41
SMG6-209ENST00000571442 OR10Q1Q8NGQ4 319 aa6.27□□□□□ -1.41
SMG6-209ENST00000571442 OR10D3Q8NH80 312 aa6.27□□□□□ -1.41
SMG6-209ENST00000571442 MBD3L2Q8NHZ7 208 aaPredicted RBP6.27□□□□□ -1.41
SMG6-209ENST00000571442 FNDC9Q8TBE3 224 aa6.27□□□□□ -1.41
SMG6-209ENST00000571442 OIT3Q8WWZ8 545 aa6.27□□□□□ -1.41
SMG6-209ENST00000571442 ARL5BQ96KC2 179 aa6.27□□□□□ -1.41
SMG6-209ENST00000571442 MRGPRX4Q96LA9 322 aa6.27□□□□□ -1.41
SMG6-209ENST00000571442 SPATA9Q9BWV2 254 aa6.27□□□□□ -1.41
SMG6-209ENST00000571442 PINK1Q9BXM7 581 aa6.27□□□□□ -1.41
SMG6-209ENST00000571442 OR11A1Q9GZK7 315 aa6.27□□□□□ -1.41
SMG6-209ENST00000571442 ACER3Q9NUN7 267 aa6.27□□□□□ -1.41
SMG6-209ENST00000571442 THUMPD1Q9NXG2 353 aaKnown RBP6.27□□□□□ -1.41
SMG6-209ENST00000571442 CALML5Q9NZT1 146 aa6.27□□□□□ -1.41
SMG6-209ENST00000571442 OSGIN1Q9UJX0 560 aa6.27□□□□□ -1.41
SMG6-209ENST00000571442 CORO2BQ9UQ03 480 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms