RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 KCNJ10P78508 379 aa12.03□□□□□ -0.48
CCDC40-205ENST00000571028 ZNF117Q03924 483 aa12.03□□□□□ -0.48
CCDC40-205ENST00000571028 KRT72Q14CN4 511 aa12.03□□□□□ -0.48
CCDC40-205ENST00000571028 ADRM1Q16186 407 aa12.03□□□□□ -0.48
CCDC40-205ENST00000571028 HYAL4Q2M3T9 481 aa12.03□□□□□ -0.48
CCDC40-205ENST00000571028 ZNF311Q5JNZ3 666 aa12.03□□□□□ -0.48
CCDC40-205ENST00000571028 CBLN3Q6UW01 205 aa12.03□□□□□ -0.48
CCDC40-205ENST00000571028 TRPM8Q7Z2W7 1104 aa12.03□□□□□ -0.48
CCDC40-205ENST00000571028 ARPINQ7Z6K5 226 aa12.03□□□□□ -0.48
CCDC40-205ENST00000571028 FAM83FQ8NEG4 500 aaPredicted RBP12.03□□□□□ -0.48
CCDC40-205ENST00000571028 NTNG2Q96CW9 530 aa12.03□□□□□ -0.48
CCDC40-205ENST00000571028 HOPXQ9BPY8 73 aaPredicted RBP12.03□□□□□ -0.48
CCDC40-205ENST00000571028 TMEM38AQ9H6F2 299 aa12.03□□□□□ -0.48
CCDC40-205ENST00000571028 ALKBH4Q9NXW9 302 aa12.03□□□□□ -0.48
CCDC40-205ENST00000571028 TAS2R10Q9NYW0 307 aa12.03□□□□□ -0.48
CCDC40-205ENST00000571028 GMEB1Q9Y692 573 aa12.03□□□□□ -0.48
CCDC40-205ENST00000571028 JMJD1CQ15652 2540 aa12.03□□□□□ -0.48
CCDC40-205ENST00000571028 B2RBV5 119 aa12.02□□□□□ -0.49
CCDC40-205ENST00000571028 ZNF264O43296 627 aa12.02□□□□□ -0.49
CCDC40-205ENST00000571028 WDR1O75083 606 aa12.02□□□□□ -0.49
CCDC40-205ENST00000571028 OPN1SWP03999 348 aa12.02□□□□□ -0.49
CCDC40-205ENST00000571028 DBIP07108 87 aaKnown RBP12.02□□□□□ -0.49
CCDC40-205ENST00000571028 GZMMP51124 257 aa12.02□□□□□ -0.49
CCDC40-205ENST00000571028 ZNF41P51814 821 aaPredicted RBP12.02□□□□□ -0.49
CCDC40-205ENST00000571028 DSCR4P56555 118 aaPredicted RBP12.02□□□□□ -0.49
CCDC40-205ENST00000571028 LIPEQ05469 1076 aa12.02□□□□□ -0.49
CCDC40-205ENST00000571028 FGFBP1Q14512 234 aa12.02□□□□□ -0.49
CCDC40-205ENST00000571028 VMACQ2NL98 169 aa12.02□□□□□ -0.49
CCDC40-205ENST00000571028 C1orf185Q5T7R7 199 aa12.02□□□□□ -0.49
CCDC40-205ENST00000571028 WLSQ5T9L3 541 aa12.02□□□□□ -0.49
CCDC40-205ENST00000571028 SHEQ5VZ18 495 aa12.02□□□□□ -0.49
CCDC40-205ENST00000571028 FAM91A1Q658Y4 838 aa12.02□□□□□ -0.49
CCDC40-205ENST00000571028 HACD2Q6Y1H2 254 aa12.02□□□□□ -0.49
CCDC40-205ENST00000571028 EIF3MQ7L2H7 374 aaKnown RBP12.02□□□□□ -0.49
CCDC40-205ENST00000571028 SERPINA11Q86U17 422 aa12.02□□□□□ -0.49
CCDC40-205ENST00000571028 KRT73Q86Y46 540 aa12.02□□□□□ -0.49
CCDC40-205ENST00000571028 LIX1LQ8IVB5 337 aa12.02□□□□□ -0.49
CCDC40-205ENST00000571028 MISPQ8IVT2 679 aa12.02□□□□□ -0.49
CCDC40-205ENST00000571028 SLC15A3Q8IY34 581 aa12.02□□□□□ -0.49
CCDC40-205ENST00000571028 RNF148Q8N7C7 305 aa12.02□□□□□ -0.49
CCDC40-205ENST00000571028 FADS6Q8N9I5 356 aa12.02□□□□□ -0.49
CCDC40-205ENST00000571028 HIPK4Q8NE63 616 aa12.02□□□□□ -0.49
CCDC40-205ENST00000571028 CNOT9Q92600 299 aaKnown RBP12.02□□□□□ -0.49
CCDC40-205ENST00000571028 SFXN2Q96NB2 322 aa12.02□□□□□ -0.49
CCDC40-205ENST00000571028 ZNF583Q96ND8 569 aa12.02□□□□□ -0.49
CCDC40-205ENST00000571028 ZDHHC11Q9H8X9 412 aa12.02□□□□□ -0.49
CCDC40-205ENST00000571028 RLIMQ9NVW2 624 aa12.02□□□□□ -0.49
CCDC40-205ENST00000571028 ZNF232Q9UNY5 417 aa12.02□□□□□ -0.49
CCDC40-205ENST00000571028 ZNF443Q9Y2A4 671 aaPredicted RBP12.02□□□□□ -0.49
CCDC40-205ENST00000571028 GTF3C1Q12789 2109 aa12.02□□□□□ -0.49
CCDC40-205ENST00000571028 NME4O00746 187 aa12.01□□□□□ -0.49
CCDC40-205ENST00000571028 GSTA4O15217 222 aa12.01□□□□□ -0.49
CCDC40-205ENST00000571028 UBOX5O94941 541 aa12.01□□□□□ -0.49
CCDC40-205ENST00000571028 PABPC4LP0CB38 370 aaKnown RBP12.01□□□□□ -0.49
CCDC40-205ENST00000571028 TCN1P20061 433 aaPredicted RBP12.01□□□□□ -0.49
CCDC40-205ENST00000571028 SRD5A2P31213 254 aa12.01□□□□□ -0.49
CCDC40-205ENST00000571028 PCGF2P35227 344 aa12.01□□□□□ -0.49
CCDC40-205ENST00000571028 ADH7P40394 386 aa12.01□□□□□ -0.49
CCDC40-205ENST00000571028 P2RX1P51575 399 aa12.01□□□□□ -0.49
CCDC40-205ENST00000571028 RBBP4Q09028 425 aa12.01□□□□□ -0.49
CCDC40-205ENST00000571028 LARS2Q15031 903 aaKnown RBP12.01□□□□□ -0.49
CCDC40-205ENST00000571028 LIN52Q52LA3 116 aa12.01□□□□□ -0.49
CCDC40-205ENST00000571028 MRPL2Q5T653 305 aaKnown RBP12.01□□□□□ -0.49
CCDC40-205ENST00000571028 RAET1LQ5VY80 246 aa12.01□□□□□ -0.49
CCDC40-205ENST00000571028 C16orf89Q6UX73 402 aa12.01□□□□□ -0.49
CCDC40-205ENST00000571028 ZNF836Q6ZNA1 936 aa12.01□□□□□ -0.49
CCDC40-205ENST00000571028 RINLQ6ZS11 566 aa12.01□□□□□ -0.49
CCDC40-205ENST00000571028 TRILQ7L0X0 811 aa12.01□□□□□ -0.49
CCDC40-205ENST00000571028 NET1Q7Z628 596 aaPredicted RBP12.01□□□□□ -0.49
CCDC40-205ENST00000571028 DEFB107AQ8IZN7 70 aa12.01□□□□□ -0.49
CCDC40-205ENST00000571028 CLIP4Q8N3C7 705 aa12.01□□□□□ -0.49
CCDC40-205ENST00000571028 METTL25Q8N6Q8 603 aa12.01□□□□□ -0.49
CCDC40-205ENST00000571028 SMYD1Q8NB12 490 aa12.01□□□□□ -0.49
CCDC40-205ENST00000571028 TOR1AIP2Q8NFQ8 470 aa12.01□□□□□ -0.49
CCDC40-205ENST00000571028 OR2T12Q8NG77 320 aa12.01□□□□□ -0.49
CCDC40-205ENST00000571028 ZNF563Q8TA94 476 aa12.01□□□□□ -0.49
CCDC40-205ENST00000571028 SLC26A7Q8TE54 656 aa12.01□□□□□ -0.49
CCDC40-205ENST00000571028 SMPDL3BQ92485 455 aa12.01□□□□□ -0.49
CCDC40-205ENST00000571028 C1GALT1C1Q96EU7 318 aa12.01□□□□□ -0.49
CCDC40-205ENST00000571028 ZNF607Q96SK3 696 aa12.01□□□□□ -0.49
CCDC40-205ENST00000571028 LAT2Q9GZY6 243 aa12.01□□□□□ -0.49
CCDC40-205ENST00000571028 UBQLN3Q9H347 655 aa12.01□□□□□ -0.49
CCDC40-205ENST00000571028 BCL2L10Q9HD36 194 aa12.01□□□□□ -0.49
CCDC40-205ENST00000571028 BEX4Q9NWD9 120 aaPredicted RBP12.01□□□□□ -0.49
CCDC40-205ENST00000571028 QPCTLQ9NXS2 382 aa12.01□□□□□ -0.49
CCDC40-205ENST00000571028 SLC35A3Q9Y2D2 325 aa12.01□□□□□ -0.49
CCDC40-205ENST00000571028 IFT52Q9Y366 437 aa12.01□□□□□ -0.49
CCDC40-205ENST00000571028 FAM215AQ9Y5M1 114 aa12.01□□□□□ -0.49
CCDC40-205ENST00000571028 AKAP6Q13023 2319 aa12.01□□□□□ -0.49
CCDC40-205ENST00000571028 TUBAL3A6NHL2 446 aa12□□□□□ -0.49
CCDC40-205ENST00000571028 HSPB2A8KAH6 182 aa12□□□□□ -0.49
CCDC40-205ENST00000571028 FAM220BPB1ANY3 271 aa12□□□□□ -0.49
CCDC40-205ENST00000571028 M0QX08 132 aa12□□□□□ -0.49
CCDC40-205ENST00000571028 SYT5O00445 386 aa12□□□□□ -0.49
CCDC40-205ENST00000571028 DVL2O14641 736 aa12□□□□□ -0.49
CCDC40-205ENST00000571028 FRS3O43559 492 aa12□□□□□ -0.49
CCDC40-205ENST00000571028 ZIC3O60481 467 aa12□□□□□ -0.49
CCDC40-205ENST00000571028 EIF4E2O60573 245 aaKnown RBP12□□□□□ -0.49
CCDC40-205ENST00000571028 OPN1LWP04000 364 aa12□□□□□ -0.49
CCDC40-205ENST00000571028 HPNP05981 417 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms