RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 BMP4P12644 408 aa16.75■□□□□ 0.27
SCARF1-204ENST00000570902 CCT5P48643 541 aa16.75■□□□□ 0.27
SCARF1-204ENST00000570902 CDC73Q6P1J9 531 aa16.75■□□□□ 0.27
SCARF1-204ENST00000570902 C3orf33Q6P1S2 294 aa16.75■□□□□ 0.27
SCARF1-204ENST00000570902 R3HCC1LQ7Z5L2 792 aaKnown RBP16.75■□□□□ 0.27
SCARF1-204ENST00000570902 C4orf33Q8N1A6 199 aa16.75■□□□□ 0.27
SCARF1-204ENST00000570902 ZNF525Q8N782 197 aa16.75■□□□□ 0.27
SCARF1-204ENST00000570902 CCDC63Q8NA47 563 aa16.75■□□□□ 0.27
SCARF1-204ENST00000570902 TOR1AIP2Q8NFQ8 470 aa16.75■□□□□ 0.27
SCARF1-204ENST00000570902 PROX1Q92786 737 aa16.75■□□□□ 0.27
SCARF1-204ENST00000570902 ZNF300Q96RE9 604 aaPredicted RBP16.75■□□□□ 0.27
SCARF1-204ENST00000570902 C12orf65Q9H3J6 166 aaKnown RBP16.75■□□□□ 0.27
SCARF1-204ENST00000570902 TMED5Q9Y3A6 229 aa16.75■□□□□ 0.27
SCARF1-204ENST00000570902 C9JVG2 144 aa16.74■□□□□ 0.27
SCARF1-204ENST00000570902 H7C417 338 aa16.74■□□□□ 0.27
SCARF1-204ENST00000570902 COPEO14579 308 aa16.74■□□□□ 0.27
SCARF1-204ENST00000570902 PROCP04070 461 aa16.74■□□□□ 0.27
SCARF1-204ENST00000570902 KRT16P08779 473 aa16.74■□□□□ 0.27
SCARF1-204ENST00000570902 KRT4P19013 534 aa16.74■□□□□ 0.27
SCARF1-204ENST00000570902 ASMTP46597 345 aa16.74■□□□□ 0.27
SCARF1-204ENST00000570902 FABP6P51161 128 aa16.74■□□□□ 0.27
SCARF1-204ENST00000570902 ATP12AP54707 1039 aa16.74■□□□□ 0.27
SCARF1-204ENST00000570902 DNAJB13P59910 316 aa16.74■□□□□ 0.27
SCARF1-204ENST00000570902 CBFBQ13951 182 aa16.74■□□□□ 0.27
SCARF1-204ENST00000570902 DCST2Q5T1A1 773 aa16.74■□□□□ 0.27
SCARF1-204ENST00000570902 CLEC6AQ6EIG7 209 aa16.74■□□□□ 0.27
SCARF1-204ENST00000570902 ZNF544Q6NX49 715 aa16.74■□□□□ 0.27
SCARF1-204ENST00000570902 EMBQ6PCB8 327 aa16.74■□□□□ 0.27
SCARF1-204ENST00000570902 TMCO5AQ8N6Q1 288 aa16.74■□□□□ 0.27
SCARF1-204ENST00000570902 ZNF433Q8N7K0 673 aaPredicted RBP16.74■□□□□ 0.27
SCARF1-204ENST00000570902 OR5W2Q8NH69 310 aa16.74■□□□□ 0.27
SCARF1-204ENST00000570902 ADAMTS15Q8TE58 950 aa16.74■□□□□ 0.27
SCARF1-204ENST00000570902 ZNF75CPQ92670 426 aaPredicted RBP16.74■□□□□ 0.27
SCARF1-204ENST00000570902 ZNF775Q96BV0 537 aaPredicted RBP16.74■□□□□ 0.27
SCARF1-204ENST00000570902 OR5B2Q96R09 309 aa16.74■□□□□ 0.27
SCARF1-204ENST00000570902 C19orf24Q9BVV8 132 aa16.74■□□□□ 0.27
SCARF1-204ENST00000570902 ACTRT3Q9BYD9 372 aa16.74■□□□□ 0.27
SCARF1-204ENST00000570902 MANSC1Q9H8J5 431 aa16.74■□□□□ 0.27
SCARF1-204ENST00000570902 TNFRSF12AQ9NP84 129 aa16.74■□□□□ 0.27
SCARF1-204ENST00000570902 SIRT3Q9NTG7 399 aaPredicted RBP16.74■□□□□ 0.27
SCARF1-204ENST00000570902 EMC3Q9P0I2 261 aa16.74■□□□□ 0.27
SCARF1-204ENST00000570902 DTNAQ9Y4J8 743 aa16.74■□□□□ 0.27
SCARF1-204ENST00000570902 NPIPA5A0A0B4J1W7 369 aa16.73■□□□□ 0.27
SCARF1-204ENST00000570902 CIB4A0PJX0 185 aa16.73■□□□□ 0.27
SCARF1-204ENST00000570902 NPIPA7E9PJI5 369 aa16.73■□□□□ 0.27
SCARF1-204ENST00000570902 ETV2O00321 342 aaPredicted RBP16.73■□□□□ 0.27
SCARF1-204ENST00000570902 ZNF264O43296 627 aa16.73■□□□□ 0.27
SCARF1-204ENST00000570902 EIF4E2O60573 245 aaKnown RBP16.73■□□□□ 0.27
SCARF1-204ENST00000570902 LMX1BO60663 402 aa16.73■□□□□ 0.27
SCARF1-204ENST00000570902 PLIN3O60664 434 aa16.73■□□□□ 0.27
SCARF1-204ENST00000570902 RAD51DO75771 328 aa16.73■□□□□ 0.27
SCARF1-204ENST00000570902 NPIPA8P0DM63 369 aa16.73■□□□□ 0.27
SCARF1-204ENST00000570902 EDNRAP25101 427 aa16.73■□□□□ 0.27
SCARF1-204ENST00000570902 CD40P25942 277 aa16.73■□□□□ 0.27
SCARF1-204ENST00000570902 CRHR1P34998 444 aa16.73■□□□□ 0.27
SCARF1-204ENST00000570902 RNF144AP50876 292 aaPredicted RBP16.73■□□□□ 0.27
SCARF1-204ENST00000570902 RPL38P63173 70 aaKnown RBP16.73■□□□□ 0.27
SCARF1-204ENST00000570902 CSNK2A1P68400 391 aaPredicted RBP16.73■□□□□ 0.27
SCARF1-204ENST00000570902 IFFO1Q0D2I5 559 aa16.73■□□□□ 0.27
SCARF1-204ENST00000570902 QPRTQ15274 297 aa16.73■□□□□ 0.27
SCARF1-204ENST00000570902 CCDC153Q494R4 210 aa16.73■□□□□ 0.27
SCARF1-204ENST00000570902 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.73■□□□□ 0.27
SCARF1-204ENST00000570902 FBXW9Q5XUX1 488 aa16.73■□□□□ 0.27
SCARF1-204ENST00000570902 RNF165Q6ZSG1 346 aa16.73■□□□□ 0.27
SCARF1-204ENST00000570902 UBE2J2Q8N2K1 259 aa16.73■□□□□ 0.27
SCARF1-204ENST00000570902 ZNF614Q8N883 585 aa16.73■□□□□ 0.27
SCARF1-204ENST00000570902 OR52N5Q8NH56 324 aa16.73■□□□□ 0.27
SCARF1-204ENST00000570902 CLHC1Q8NHS4 586 aa16.73■□□□□ 0.27
SCARF1-204ENST00000570902 RFWD2Q8NHY2 731 aa16.73■□□□□ 0.27
SCARF1-204ENST00000570902 C10orf105Q8TEF2 133 aa16.73■□□□□ 0.27
SCARF1-204ENST00000570902 PARD6BQ9BYG5 372 aa16.73■□□□□ 0.27
SCARF1-204ENST00000570902 SERINC1Q9NRX5 453 aa16.73■□□□□ 0.27
SCARF1-204ENST00000570902 BAIAP2L1Q9UHR4 511 aa16.73■□□□□ 0.27
SCARF1-204ENST00000570902 FAF1Q9UNN5 650 aaPredicted RBP16.73■□□□□ 0.27
SCARF1-204ENST00000570902 PTGDR2Q9Y5Y4 395 aa16.73■□□□□ 0.27
SCARF1-204ENST00000570902 CHEK2O96017 543 aa16.72■□□□□ 0.27
SCARF1-204ENST00000570902 NUDT17P0C025 328 aa16.72■□□□□ 0.27
SCARF1-204ENST00000570902 IGHV4-31P0DP07 118 aa16.72■□□□□ 0.27
SCARF1-204ENST00000570902 UBL4AP11441 157 aa16.72■□□□□ 0.27
SCARF1-204ENST00000570902 ZNF16P17020 682 aaPredicted RBP16.72■□□□□ 0.27
SCARF1-204ENST00000570902 SRD5A1P18405 259 aa16.72■□□□□ 0.27
SCARF1-204ENST00000570902 EFNA1P20827 205 aaPredicted RBP16.72■□□□□ 0.27
SCARF1-204ENST00000570902 USF1P22415 310 aaPredicted RBP16.72■□□□□ 0.27
SCARF1-204ENST00000570902 HPCAL1P37235 193 aa16.72■□□□□ 0.27
SCARF1-204ENST00000570902 RPL3P39023 403 aaKnown RBP16.72■□□□□ 0.27
SCARF1-204ENST00000570902 ZNF83P51522 516 aa16.72■□□□□ 0.27
SCARF1-204ENST00000570902 CCR4P51679 360 aa16.72■□□□□ 0.27
SCARF1-204ENST00000570902 EFNA4P52798 201 aa16.72■□□□□ 0.27
SCARF1-204ENST00000570902 NDUFAF6Q330K2 333 aa16.72■□□□□ 0.27
SCARF1-204ENST00000570902 RFTN2Q52LD8 501 aaPredicted RBP16.72■□□□□ 0.27
SCARF1-204ENST00000570902 HOMEZQ8IX15 550 aa16.72■□□□□ 0.27
SCARF1-204ENST00000570902 OR56A1Q8NGH5 318 aa16.72■□□□□ 0.27
SCARF1-204ENST00000570902 SLC25A15Q9Y619 301 aa16.72■□□□□ 0.27
SCARF1-204ENST00000570902 SVEP1Q4LDE5 3571 aa16.72■□□□□ 0.27
SCARF1-204ENST00000570902 IGKV3D-15A0A087WSY6 115 aa16.71■□□□□ 0.27
SCARF1-204ENST00000570902 CCT8L1PA6NM43 557 aa16.71■□□□□ 0.27
SCARF1-204ENST00000570902 NPIPB9F8W1W9 429 aa16.71■□□□□ 0.27
SCARF1-204ENST00000570902 AZIN1O14977 448 aa16.71■□□□□ 0.27
SCARF1-204ENST00000570902 H6PDO95479 791 aa16.71■□□□□ 0.27
SCARF1-204ENST00000570902 CPA3P15088 417 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms