RNA–Protein interactions for RNA: ENST00000570296.1

CLK3-227, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 916 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-227ENST00000570296 OR5B2Q96R09 309 aa15.63■□□□□ 0.09
CLK3-227ENST00000570296 TMPRSS13Q9BYE2 586 aa15.63■□□□□ 0.09
CLK3-227ENST00000570296 NARFLQ9H6Q4 476 aa15.63■□□□□ 0.09
CLK3-227ENST00000570296 DYNLRB1Q9NP97 96 aa15.63■□□□□ 0.09
CLK3-227ENST00000570296 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.63■□□□□ 0.09
CLK3-227ENST00000570296 TREM2Q9NZC2 230 aa15.63■□□□□ 0.09
CLK3-227ENST00000570296 GRID1Q9ULK0 1009 aa15.63■□□□□ 0.09
CLK3-227ENST00000570296 SNX6Q9UNH7 406 aa15.63■□□□□ 0.09
CLK3-227ENST00000570296 A0A0G2JMP0 313 aa15.62■□□□□ 0.09
CLK3-227ENST00000570296 A0A0X1KG70 313 aa15.62■□□□□ 0.09
CLK3-227ENST00000570296 GNG14A0A1W2PPG7 69 aa15.62■□□□□ 0.09
CLK3-227ENST00000570296 ZNF716A6NP11 495 aa15.62■□□□□ 0.09
CLK3-227ENST00000570296 VSTM5A8MXK1 200 aa15.62■□□□□ 0.09
CLK3-227ENST00000570296 J3QLI3 93 aa15.62■□□□□ 0.09
CLK3-227ENST00000570296 PGRMC1O00264 195 aaKnown RBP15.62■□□□□ 0.09
CLK3-227ENST00000570296 PRSS23O95084 383 aa15.62■□□□□ 0.09
CLK3-227ENST00000570296 ANPEPP15144 967 aa15.62■□□□□ 0.09
CLK3-227ENST00000570296 SPRP35270 261 aaPredicted RBP15.62■□□□□ 0.09
CLK3-227ENST00000570296 P2RX1P51575 399 aa15.62■□□□□ 0.09
CLK3-227ENST00000570296 CSNK2A1P68400 391 aaPredicted RBP15.62■□□□□ 0.09
CLK3-227ENST00000570296 FAM83EQ2M2I3 478 aa15.62■□□□□ 0.09
CLK3-227ENST00000570296 SLC25A53Q5H9E4 307 aa15.62■□□□□ 0.09
CLK3-227ENST00000570296 C9orf135Q5VTT2 229 aa15.62■□□□□ 0.09
CLK3-227ENST00000570296 C3orf33Q6P1S2 294 aa15.62■□□□□ 0.09
CLK3-227ENST00000570296 ZAR1Q86SH2 424 aa15.62■□□□□ 0.09
CLK3-227ENST00000570296 CENPLQ8N0S6 344 aaPredicted RBP15.62■□□□□ 0.09
CLK3-227ENST00000570296 OR4M2Q8NGB6 313 aa15.62■□□□□ 0.09
CLK3-227ENST00000570296 OR4F15Q8NGB8 312 aa15.62■□□□□ 0.09
CLK3-227ENST00000570296 OR4F6Q8NGB9 312 aa15.62■□□□□ 0.09
CLK3-227ENST00000570296 FBXO30Q8TB52 745 aa15.62■□□□□ 0.09
CLK3-227ENST00000570296 C16orf78Q8WTQ4 265 aa15.62■□□□□ 0.09
CLK3-227ENST00000570296 PBKQ96KB5 322 aa15.62■□□□□ 0.09
CLK3-227ENST00000570296 ZNF442Q9H7R0 627 aa15.62■□□□□ 0.09
CLK3-227ENST00000570296 OBP2BQ9NPH6 170 aa15.62■□□□□ 0.09
CLK3-227ENST00000570296 CPSF2Q9P2I0 782 aaKnown RBP15.62■□□□□ 0.09
CLK3-227ENST00000570296 ICAM5Q9UMF0 924 aa15.62■□□□□ 0.09
CLK3-227ENST00000570296 CORINQ9Y5Q5 1042 aa15.62■□□□□ 0.09
CLK3-227ENST00000570296 E7ESA3 106 aa15.61■□□□□ 0.09
CLK3-227ENST00000570296 H6PDO95479 791 aa15.61■□□□□ 0.09
CLK3-227ENST00000570296 NPR2P20594 1047 aa15.61■□□□□ 0.09
CLK3-227ENST00000570296 DDCP20711 480 aa15.61■□□□□ 0.09
CLK3-227ENST00000570296 PAX7P23759 505 aa15.61■□□□□ 0.09
CLK3-227ENST00000570296 NTF4P34130 210 aa15.61■□□□□ 0.09
CLK3-227ENST00000570296 GSTM5P46439 218 aa15.61■□□□□ 0.09
CLK3-227ENST00000570296 DIO1P49895 249 aa15.61■□□□□ 0.09
CLK3-227ENST00000570296 LMO4P61968 165 aa15.61■□□□□ 0.09
CLK3-227ENST00000570296 RAE1P78406 368 aaKnown RBP15.61■□□□□ 0.09
CLK3-227ENST00000570296 CCDC91Q7Z6B0 441 aa15.61■□□□□ 0.09
CLK3-227ENST00000570296 MTDHQ86UE4 582 aaKnown RBP15.61■□□□□ 0.09
CLK3-227ENST00000570296 ZNF527Q8NB42 609 aa15.61■□□□□ 0.09
CLK3-227ENST00000570296 NUP37Q8NFH4 326 aa15.61■□□□□ 0.09
CLK3-227ENST00000570296 CEP70Q8NHQ1 597 aa15.61■□□□□ 0.09
CLK3-227ENST00000570296 GPR119Q8TDV5 335 aa15.61■□□□□ 0.09
CLK3-227ENST00000570296 LRRC58Q96CX6 371 aa15.61■□□□□ 0.09
CLK3-227ENST00000570296 EQTNQ9NQ60 294 aa15.61■□□□□ 0.09
CLK3-227ENST00000570296 PCTPQ9UKL6 214 aa15.61■□□□□ 0.09
CLK3-227ENST00000570296 ETV2O00321 342 aaPredicted RBP15.6■□□□□ 0.09
CLK3-227ENST00000570296 KCNK2O95069 426 aa15.6■□□□□ 0.09
CLK3-227ENST00000570296 IGFBP1P08833 259 aaPredicted RBP15.6■□□□□ 0.09
CLK3-227ENST00000570296 HSD3B1P14060 373 aa15.6■□□□□ 0.09
CLK3-227ENST00000570296 ADRA2CP18825 462 aa15.6■□□□□ 0.09
CLK3-227ENST00000570296 HSD3B2P26439 372 aa15.6■□□□□ 0.09
CLK3-227ENST00000570296 NTSP30990 170 aa15.6■□□□□ 0.09
CLK3-227ENST00000570296 SLC16A1P53985 500 aa15.6■□□□□ 0.09
CLK3-227ENST00000570296 MYBPC1Q00872 1141 aa15.6■□□□□ 0.09
CLK3-227ENST00000570296 POU3F1Q03052 451 aaPredicted RBP15.6■□□□□ 0.09
CLK3-227ENST00000570296 TOMM34Q15785 309 aaPredicted RBP15.6■□□□□ 0.09
CLK3-227ENST00000570296 TUSC1Q2TAM9 212 aa15.6■□□□□ 0.09
CLK3-227ENST00000570296 SLC9B1Q4ZJI4 515 aa15.6■□□□□ 0.09
CLK3-227ENST00000570296 GRTP1Q5TC63 336 aa15.6■□□□□ 0.09
CLK3-227ENST00000570296 CBLN3Q6UW01 205 aa15.6■□□□□ 0.09
CLK3-227ENST00000570296 TMPPEQ6ZT21 453 aa15.6■□□□□ 0.09
CLK3-227ENST00000570296 RNF217Q8TC41 542 aa15.6■□□□□ 0.09
CLK3-227ENST00000570296 PHOSPHO1Q8TCT1 267 aa15.6■□□□□ 0.09
CLK3-227ENST00000570296 BOD1Q96IK1 185 aa15.6■□□□□ 0.09
CLK3-227ENST00000570296 AMDHD1Q96NU7 426 aa15.6■□□□□ 0.09
CLK3-227ENST00000570296 ANKRD27Q96NW4 1050 aa15.6■□□□□ 0.09
CLK3-227ENST00000570296 C1QTNF5Q9BXJ0 243 aa15.6■□□□□ 0.09
CLK3-227ENST00000570296 GLIPR2Q9H4G4 154 aa15.6■□□□□ 0.09
CLK3-227ENST00000570296 LZTFL1Q9NQ48 299 aa15.6■□□□□ 0.09
CLK3-227ENST00000570296 TAS2R7Q9NYW3 318 aa15.6■□□□□ 0.09
CLK3-227ENST00000570296 UPB1Q9UBR1 384 aa15.6■□□□□ 0.09
CLK3-227ENST00000570296 DNAJC9-AS1A6NH13 148 aa15.59■□□□□ 0.09
CLK3-227ENST00000570296 SULT2B1O00204 365 aa15.59■□□□□ 0.09
CLK3-227ENST00000570296 HSPA4LO95757 839 aa15.59■□□□□ 0.09
CLK3-227ENST00000570296 FSHBP01225 129 aa15.59■□□□□ 0.09
CLK3-227ENST00000570296 PRPS2P11908 318 aa15.59■□□□□ 0.09
CLK3-227ENST00000570296 ACHEP22303 614 aa15.59■□□□□ 0.09
CLK3-227ENST00000570296 NAAAQ02083 359 aa15.59■□□□□ 0.09
CLK3-227ENST00000570296 ZP4Q12836 540 aa15.59■□□□□ 0.09
CLK3-227ENST00000570296 PRSS53Q2L4Q9 553 aa15.59■□□□□ 0.09
CLK3-227ENST00000570296 C3orf36Q3SXR2 165 aa15.59■□□□□ 0.09
CLK3-227ENST00000570296 SPIN4Q56A73 249 aa15.59■□□□□ 0.09
CLK3-227ENST00000570296 GALNT18Q6P9A2 607 aa15.59■□□□□ 0.09
CLK3-227ENST00000570296 DOK3Q7L591 496 aa15.59■□□□□ 0.09
CLK3-227ENST00000570296 SPATA21Q7Z572 469 aa15.59■□□□□ 0.09
CLK3-227ENST00000570296 CARM1Q86X55 608 aa15.59■□□□□ 0.09
CLK3-227ENST00000570296 GAS2L3Q86XJ1 694 aa15.59■□□□□ 0.09
CLK3-227ENST00000570296 ZBED8Q8IZ13 594 aa15.59■□□□□ 0.09
CLK3-227ENST00000570296 SIGLECL1Q8N7X8 197 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms