RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	IL19	Q9UHD0	177 aa		1.71	□□□□□ -2.14
UBR1-209	ENST00000569243	SPACA6	W5XKT8	324 aa		1.71	□□□□□ -2.14
UBR1-209	ENST00000569243	SPAG9	O60271	1321 aa	Known RBP	1.7	□□□□□ -2.14
UBR1-209	ENST00000569243	PPIAL4E	A0A075B759	164 aa		1.7	□□□□□ -2.14
UBR1-209	ENST00000569243	PPIAL4C	A0A0B4J2A2	164 aa		1.7	□□□□□ -2.14
UBR1-209	ENST00000569243	ESYT2	A0FGR8	921 aa		1.7	□□□□□ -2.14
UBR1-209	ENST00000569243	PPIAL4D	F5H284	164 aa		1.7	□□□□□ -2.14
UBR1-209	ENST00000569243	TMX2-CTNND1	H3BSU7	103 aa		1.7	□□□□□ -2.14
UBR1-209	ENST00000569243	AIRE	O43918	545 aa		1.7	□□□□□ -2.14
UBR1-209	ENST00000569243	KERA	O60938	352 aa		1.7	□□□□□ -2.14
UBR1-209	ENST00000569243	UGT2B17	O75795	530 aa		1.7	□□□□□ -2.14
UBR1-209	ENST00000569243	IGLV3-19	P01714	112 aa		1.7	□□□□□ -2.14
UBR1-209	ENST00000569243	PPIAL4F	P0DN26	164 aa		1.7	□□□□□ -2.14
UBR1-209	ENST00000569243	ALPPL2	P10696	532 aa		1.7	□□□□□ -2.14
UBR1-209	ENST00000569243	HLA-DPA1	P20036	260 aa		1.7	□□□□□ -2.14
UBR1-209	ENST00000569243	GGTLC2	Q14390	218 aa		1.7	□□□□□ -2.14
UBR1-209	ENST00000569243	KPRP	Q5T749	579 aa	Predicted RBP	1.7	□□□□□ -2.14
UBR1-209	ENST00000569243	ATF7IP2	Q5U623	682 aa		1.7	□□□□□ -2.14
UBR1-209	ENST00000569243	C11orf71	Q6IPW1	123 aa		1.7	□□□□□ -2.14
UBR1-209	ENST00000569243	FAM199X	Q6PEV8	388 aa	Predicted RBP	1.7	□□□□□ -2.14
UBR1-209	ENST00000569243	WDR88	Q6ZMY6	472 aa		1.7	□□□□□ -2.14
UBR1-209	ENST00000569243	LANCL3	Q6ZV70	420 aa		1.7	□□□□□ -2.14
UBR1-209	ENST00000569243	CERS5	Q8N5B7	392 aa		1.7	□□□□□ -2.14
UBR1-209	ENST00000569243	DUSP18	Q8NEJ0	188 aa		1.7	□□□□□ -2.14
UBR1-209	ENST00000569243	OR51S1	Q8NGJ8	323 aa		1.7	□□□□□ -2.14
UBR1-209	ENST00000569243	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	1.7	□□□□□ -2.14
UBR1-209	ENST00000569243	C14orf79	Q96F83	325 aa		1.7	□□□□□ -2.14
UBR1-209	ENST00000569243	RUFY1	Q96T51	708 aa		1.7	□□□□□ -2.14
UBR1-209	ENST00000569243	RASL11B	Q9BPW5	248 aa		1.7	□□□□□ -2.14
UBR1-209	ENST00000569243	PELO	Q9BRX2	385 aa	Known RBP	1.7	□□□□□ -2.14
UBR1-209	ENST00000569243	TBCD	Q9BTW9	1192 aa		1.7	□□□□□ -2.14
UBR1-209	ENST00000569243	CRNKL1	Q9BZJ0	848 aa	Known RBP	1.7	□□□□□ -2.14
UBR1-209	ENST00000569243	RSPH9	Q9H1X1	276 aa	Predicted RBP	1.7	□□□□□ -2.14
UBR1-209	ENST00000569243	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	1.7	□□□□□ -2.14
UBR1-209	ENST00000569243	LHX9	Q9NQ69	397 aa		1.7	□□□□□ -2.14
UBR1-209	ENST00000569243	MTRR	Q9UBK8	725 aa		1.7	□□□□□ -2.14
UBR1-209	ENST00000569243	ANAPC7	Q9UJX3	599 aa		1.7	□□□□□ -2.14
UBR1-209	ENST00000569243	FOXJ3	Q9UPW0	622 aa		1.7	□□□□□ -2.14
UBR1-209	ENST00000569243	OARD1	Q9Y530	152 aa		1.7	□□□□□ -2.14
UBR1-209	ENST00000569243	TTC21B	Q7Z4L5	1316 aa		1.69	□□□□□ -2.14
UBR1-209	ENST00000569243	IGHV3OR16-13	A0A075B7E8	117 aa		1.69	□□□□□ -2.14
UBR1-209	ENST00000569243		A0A0G2JRQ6	117 aa		1.69	□□□□□ -2.14
UBR1-209	ENST00000569243	TMEM150B	A6NC51	233 aa		1.69	□□□□□ -2.14
UBR1-209	ENST00000569243	DUX1	O43812	170 aa		1.69	□□□□□ -2.14
UBR1-209	ENST00000569243	SLC25A27	O95847	323 aa		1.69	□□□□□ -2.14
UBR1-209	ENST00000569243	PCCB	P05166	539 aa		1.69	□□□□□ -2.14
UBR1-209	ENST00000569243	PRPS1	P60891	318 aa		1.69	□□□□□ -2.14
UBR1-209	ENST00000569243	GABPB1	Q06547	395 aa	Predicted RBP	1.69	□□□□□ -2.14
UBR1-209	ENST00000569243	CBX3	Q13185	183 aa		1.69	□□□□□ -2.14
UBR1-209	ENST00000569243	MOBP	Q13875	183 aa		1.69	□□□□□ -2.14
UBR1-209	ENST00000569243	KLF17	Q5JT82	389 aa	Predicted RBP	1.69	□□□□□ -2.14
UBR1-209	ENST00000569243	PAGE3	Q5JUK9	113 aa		1.69	□□□□□ -2.14
UBR1-209	ENST00000569243	UNC5D	Q6UXZ4	953 aa		1.69	□□□□□ -2.14
UBR1-209	ENST00000569243	APTX	Q7Z2E3	356 aa	Known RBP	1.69	□□□□□ -2.14
UBR1-209	ENST00000569243	C6orf120	Q7Z4R8	191 aa		1.69	□□□□□ -2.14
UBR1-209	ENST00000569243	CBWD2	Q8IUF1	395 aa		1.69	□□□□□ -2.14
UBR1-209	ENST00000569243	PNKD	Q8N490	385 aa		1.69	□□□□□ -2.14
UBR1-209	ENST00000569243	M1AP	Q8TC57	530 aa		1.69	□□□□□ -2.14
UBR1-209	ENST00000569243	GIPC3	Q8TF64	312 aa		1.69	□□□□□ -2.14
UBR1-209	ENST00000569243	SLC13A3	Q8WWT9	602 aa		1.69	□□□□□ -2.14
UBR1-209	ENST00000569243	TSNARE1	Q96NA8	513 aa		1.69	□□□□□ -2.14
UBR1-209	ENST00000569243	HIST1H4G	Q99525	98 aa		1.69	□□□□□ -2.14
UBR1-209	ENST00000569243	KLHDC3	Q9BQ90	382 aa		1.69	□□□□□ -2.14
UBR1-209	ENST00000569243	GPR61	Q9BZJ8	451 aa		1.69	□□□□□ -2.14
UBR1-209	ENST00000569243	OR11A1	Q9GZK7	315 aa		1.69	□□□□□ -2.14
UBR1-209	ENST00000569243	NUDT15	Q9NV35	164 aa		1.69	□□□□□ -2.14
UBR1-209	ENST00000569243	ANO10	Q9NW15	660 aa		1.69	□□□□□ -2.14
UBR1-209	ENST00000569243	ATP6V1H	Q9UI12	483 aa		1.69	□□□□□ -2.14
UBR1-209	ENST00000569243	NOL7	Q9UMY1	257 aa	Known RBP	1.69	□□□□□ -2.14
UBR1-209	ENST00000569243	FAM74A7	A6NL05	159 aa		1.68	□□□□□ -2.14
UBR1-209	ENST00000569243		H3BMQ9	156 aa		1.68	□□□□□ -2.14
UBR1-209	ENST00000569243	RRAS	P10301	218 aa		1.68	□□□□□ -2.14
UBR1-209	ENST00000569243	CYLC1	P35663	651 aa	Predicted RBP	1.68	□□□□□ -2.14
UBR1-209	ENST00000569243	MADCAM1	Q13477	382 aa		1.68	□□□□□ -2.14
UBR1-209	ENST00000569243	ARL6IP1	Q15041	203 aa		1.68	□□□□□ -2.14
UBR1-209	ENST00000569243	FAM74A3	Q4VXF1	159 aa		1.68	□□□□□ -2.14
UBR1-209	ENST00000569243	OR6B2	Q6IFH4	312 aa		1.68	□□□□□ -2.14
UBR1-209	ENST00000569243	RFLNA	Q6ZTI6	216 aa		1.68	□□□□□ -2.14
UBR1-209	ENST00000569243	BCORP1	Q8N888	145 aa		1.68	□□□□□ -2.14
UBR1-209	ENST00000569243	RPUSD4	Q96CM3	377 aa	Known RBP	1.68	□□□□□ -2.14
UBR1-209	ENST00000569243	SELENOI	Q9C0D9	397 aa		1.68	□□□□□ -2.14
UBR1-209	ENST00000569243	XPO4	Q9C0E2	1151 aa	Known RBP	1.68	□□□□□ -2.14
UBR1-209	ENST00000569243	NAT10	Q9H0A0	1025 aa	Known RBP	1.68	□□□□□ -2.14
UBR1-209	ENST00000569243	TPK1	Q9H3S4	243 aa		1.68	□□□□□ -2.14
UBR1-209	ENST00000569243	SMYD3	Q9H7B4	428 aa		1.68	□□□□□ -2.14
UBR1-209	ENST00000569243	ROPN1	Q9HAT0	212 aa	Predicted RBP	1.68	□□□□□ -2.14
UBR1-209	ENST00000569243	WARS2	Q9UGM6	360 aa	Known RBP	1.68	□□□□□ -2.14
UBR1-209	ENST00000569243	XPO7	Q9UIA9	1087 aa	Known RBP	1.68	□□□□□ -2.14
UBR1-209	ENST00000569243	KIF25	Q9UIL4	384 aa		1.68	□□□□□ -2.14
UBR1-209	ENST00000569243	ISY1	Q9ULR0	285 aa	Known RBP	1.68	□□□□□ -2.14
UBR1-209	ENST00000569243	MAD1L1	Q9Y6D9	718 aa		1.68	□□□□□ -2.14
UBR1-209	ENST00000569243	FAM230A	A0A1W2PPH8	454 aa		1.67	□□□□□ -2.14
UBR1-209	ENST00000569243	SYCE3	A1L190	88 aa		1.67	□□□□□ -2.14
UBR1-209	ENST00000569243	BCAS2	O75934	225 aa	Predicted RBP	1.67	□□□□□ -2.14
UBR1-209	ENST00000569243	CCDC192	P0DO97	292 aa		1.67	□□□□□ -2.14
UBR1-209	ENST00000569243	CYP2B6	P20813	491 aa		1.67	□□□□□ -2.14
UBR1-209	ENST00000569243	OTX2	P32243	289 aa		1.67	□□□□□ -2.14
UBR1-209	ENST00000569243	BDKRB1	P46663	353 aa		1.67	□□□□□ -2.14
UBR1-209	ENST00000569243	CCR6	P51684	374 aa		1.67	□□□□□ -2.14
UBR1-209	ENST00000569243	TAS2R19	P59542	299 aa		1.67	□□□□□ -2.14

Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms