RNA–Protein interactions for RNA: ENST00000569062.1

ABCA3-206, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 5

Gene ABCA3, Length 900 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-206ENST00000569062 ST8SIA1Q92185 356 aa17.99■□□□□ 0.47
ABCA3-206ENST00000569062 CPNE4Q96A23 557 aaPredicted RBP17.99■□□□□ 0.47
ABCA3-206ENST00000569062 VPS33AQ96AX1 596 aa17.99■□□□□ 0.47
ABCA3-206ENST00000569062 TRNT1Q96Q11 434 aaKnown RBP17.99■□□□□ 0.47
ABCA3-206ENST00000569062 EBF4Q9BQW3 602 aa17.99■□□□□ 0.47
ABCA3-206ENST00000569062 SLC39A3Q9BRY0 314 aa17.99■□□□□ 0.47
ABCA3-206ENST00000569062 TIGARQ9NQ88 270 aa17.99■□□□□ 0.47
ABCA3-206ENST00000569062 GLRX2Q9NS18 164 aa17.99■□□□□ 0.47
ABCA3-206ENST00000569062 CCM2LQ9NUG4 571 aaPredicted RBP17.99■□□□□ 0.47
ABCA3-206ENST00000569062 UQCRHLA0A096LP55 91 aa17.98■□□□□ 0.47
ABCA3-206ENST00000569062 CASKO14936 926 aa17.98■□□□□ 0.47
ABCA3-206ENST00000569062 ADAM11O75078 769 aa17.98■□□□□ 0.47
ABCA3-206ENST00000569062 KRT75O95678 551 aa17.98■□□□□ 0.47
ABCA3-206ENST00000569062 AGTR1P30556 359 aa17.98■□□□□ 0.47
ABCA3-206ENST00000569062 RYKP34925 604 aa17.98■□□□□ 0.47
ABCA3-206ENST00000569062 IDH3AP50213 366 aa17.98■□□□□ 0.47
ABCA3-206ENST00000569062 ANXA11P50995 505 aaKnown RBP17.98■□□□□ 0.47
ABCA3-206ENST00000569062 ART1P52961 327 aa17.98■□□□□ 0.47
ABCA3-206ENST00000569062 MVDP53602 400 aa17.98■□□□□ 0.47
ABCA3-206ENST00000569062 MAPK11Q15759 364 aa17.98■□□□□ 0.47
ABCA3-206ENST00000569062 LRRC74BQ6ZQY2 392 aa17.98■□□□□ 0.47
ABCA3-206ENST00000569062 C22orf34Q6ZV56 151 aa17.98■□□□□ 0.47
ABCA3-206ENST00000569062 HDXQ7Z353 690 aa17.98■□□□□ 0.47
ABCA3-206ENST00000569062 ZNF550Q7Z398 422 aa17.98■□□□□ 0.47
ABCA3-206ENST00000569062 MIER2Q8N344 545 aa17.98■□□□□ 0.47
ABCA3-206ENST00000569062 REXO5Q96IC2 774 aaKnown RBP17.98■□□□□ 0.47
ABCA3-206ENST00000569062 C12orf49Q9H741 205 aa17.98■□□□□ 0.47
ABCA3-206ENST00000569062 TCF7L2Q9NQB0 619 aa17.98■□□□□ 0.47
ABCA3-206ENST00000569062 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.98■□□□□ 0.47
ABCA3-206ENST00000569062 ACER3Q9NUN7 267 aa17.98■□□□□ 0.47
ABCA3-206ENST00000569062 LIPT1Q9Y234 373 aa17.98■□□□□ 0.47
ABCA3-206ENST00000569062 PLEKHA6Q9Y2H5 1048 aa17.98■□□□□ 0.47
ABCA3-206ENST00000569062 ABCA4P78363 2273 aa17.97■□□□□ 0.47
ABCA3-206ENST00000569062 IGHV3-15A0A0B4J1V0 119 aa17.97■□□□□ 0.47
ABCA3-206ENST00000569062 A0A1W2PPR1 153 aa17.97■□□□□ 0.47
ABCA3-206ENST00000569062 C16orf97H3BN30 126 aa17.97■□□□□ 0.47
ABCA3-206ENST00000569062 TGDSO95455 350 aa17.97■□□□□ 0.47
ABCA3-206ENST00000569062 ANP32DO95626 131 aa17.97■□□□□ 0.47
ABCA3-206ENST00000569062 H2AFXP16104 143 aaPredicted RBP17.97■□□□□ 0.47
ABCA3-206ENST00000569062 SLC7A1P30825 629 aa17.97■□□□□ 0.47
ABCA3-206ENST00000569062 TXNL4AP83876 142 aaKnown RBP17.97■□□□□ 0.47
ABCA3-206ENST00000569062 MERTKQ12866 999 aa17.97■□□□□ 0.47
ABCA3-206ENST00000569062 ANKRD34AQ69YU3 496 aa17.97■□□□□ 0.47
ABCA3-206ENST00000569062 GTF2IRD2BQ6EKJ0 949 aa17.97■□□□□ 0.47
ABCA3-206ENST00000569062 C3orf33Q6P1S2 294 aa17.97■□□□□ 0.47
ABCA3-206ENST00000569062 PLEKHM3Q6ZWE6 761 aa17.97■□□□□ 0.47
ABCA3-206ENST00000569062 FCRLAQ7L513 359 aa17.97■□□□□ 0.47
ABCA3-206ENST00000569062 GTF2IRD2Q86UP8 949 aa17.97■□□□□ 0.47
ABCA3-206ENST00000569062 LSRQ86X29 649 aaPredicted RBP17.97■□□□□ 0.47
ABCA3-206ENST00000569062 ZNF563Q8TA94 476 aa17.97■□□□□ 0.47
ABCA3-206ENST00000569062 DYDC1Q8WWB3 177 aa17.97■□□□□ 0.47
ABCA3-206ENST00000569062 TMEM234Q8WY98 164 aa17.97■□□□□ 0.47
ABCA3-206ENST00000569062 CNOT9Q92600 299 aaKnown RBP17.97■□□□□ 0.47
ABCA3-206ENST00000569062 NINJ1Q92982 152 aa17.97■□□□□ 0.47
ABCA3-206ENST00000569062 AURKBQ96GD4 344 aaPredicted RBP17.97■□□□□ 0.47
ABCA3-206ENST00000569062 ITCHQ96J02 903 aa17.97■□□□□ 0.47
ABCA3-206ENST00000569062 OR5B2Q96R09 309 aa17.97■□□□□ 0.47
ABCA3-206ENST00000569062 MED18Q9BUE0 208 aa17.97■□□□□ 0.47
ABCA3-206ENST00000569062 KLHL4Q9C0H6 718 aa17.97■□□□□ 0.47
ABCA3-206ENST00000569062 RMND5AQ9H871 391 aa17.97■□□□□ 0.47
ABCA3-206ENST00000569062 PLEKHF2Q9H8W4 249 aa17.97■□□□□ 0.47
ABCA3-206ENST00000569062 C6orf203Q9P0P8 240 aaPredicted RBP17.97■□□□□ 0.47
ABCA3-206ENST00000569062 TEP1Q99973 2627 aaKnown RBP17.96■□□□□ 0.47
ABCA3-206ENST00000569062 FAM234BA2RU67 622 aa17.96■□□□□ 0.47
ABCA3-206ENST00000569062 AGAP5A6NIR3 686 aa17.96■□□□□ 0.47
ABCA3-206ENST00000569062 POLR3GO15318 223 aaPredicted RBP17.96■□□□□ 0.47
ABCA3-206ENST00000569062 SIAH2O43255 324 aa17.96■□□□□ 0.47
ABCA3-206ENST00000569062 GOSR1O95249 250 aa17.96■□□□□ 0.47
ABCA3-206ENST00000569062 PABPC4LP0CB38 370 aaKnown RBP17.96■□□□□ 0.47
ABCA3-206ENST00000569062 ZCCHC18P0CG32 403 aa17.96■□□□□ 0.47
ABCA3-206ENST00000569062 NR2F1P10589 423 aa17.96■□□□□ 0.47
ABCA3-206ENST00000569062 ETFAP13804 333 aa17.96■□□□□ 0.47
ABCA3-206ENST00000569062 ENPP1P22413 925 aa17.96■□□□□ 0.47
ABCA3-206ENST00000569062 C6orf10Q5SRN2 563 aa17.96■□□□□ 0.47
ABCA3-206ENST00000569062 SPNS3Q6ZMD2 512 aa17.96■□□□□ 0.47
ABCA3-206ENST00000569062 MSANTD1Q6ZTZ1 278 aa17.96■□□□□ 0.47
ABCA3-206ENST00000569062 TUSC5Q8IXB3 177 aa17.96■□□□□ 0.47
ABCA3-206ENST00000569062 ARFGAP2Q8N6H7 521 aa17.96■□□□□ 0.47
ABCA3-206ENST00000569062 GOLGA6L1Q8N7Z2 621 aa17.96■□□□□ 0.47
ABCA3-206ENST00000569062 ZC3HAV1LQ96H79 300 aaKnown RBP17.96■□□□□ 0.47
ABCA3-206ENST00000569062 CCDC106Q9BWC9 280 aa17.96■□□□□ 0.47
ABCA3-206ENST00000569062 TPT1P8Q9HAU6 139 aa17.96■□□□□ 0.47
ABCA3-206ENST00000569062 EXOSC3Q9NQT5 275 aaKnown RBP17.96■□□□□ 0.47
ABCA3-206ENST00000569062 CTPS2Q9NRF8 586 aa17.96■□□□□ 0.47
ABCA3-206ENST00000569062 HIVEP1P15822 2718 aa17.96■□□□□ 0.47
ABCA3-206ENST00000569062 VPS13CQ709C8 3753 aa17.95■□□□□ 0.46
ABCA3-206ENST00000569062 HMGB1P1B2RPK0 211 aaPredicted RBP17.95■□□□□ 0.46
ABCA3-206ENST00000569062 PRKD3O94806 890 aa17.95■□□□□ 0.46
ABCA3-206ENST00000569062 KLK2P20151 261 aa17.95■□□□□ 0.46
ABCA3-206ENST00000569062 RPS4Y1P22090 263 aaKnown RBP17.95■□□□□ 0.46
ABCA3-206ENST00000569062 CRATP43155 626 aa17.95■□□□□ 0.46
ABCA3-206ENST00000569062 AQP5P55064 265 aa17.95■□□□□ 0.46
ABCA3-206ENST00000569062 RAC3P60763 192 aa17.95■□□□□ 0.46
ABCA3-206ENST00000569062 PPP2R2AP63151 447 aa17.95■□□□□ 0.46
ABCA3-206ENST00000569062 RNPS1Q15287 305 aaKnown RBP17.95■□□□□ 0.46
ABCA3-206ENST00000569062 SLC2A7Q6PXP3 512 aa17.95■□□□□ 0.46
ABCA3-206ENST00000569062 NUFIP2Q7Z417 695 aaKnown RBP17.95■□□□□ 0.46
ABCA3-206ENST00000569062 WDR60Q8WVS4 1066 aa17.95■□□□□ 0.46
ABCA3-206ENST00000569062 GTF2H4Q92759 462 aa17.95■□□□□ 0.46
ABCA3-206ENST00000569062 MTHFD2LQ9H903 347 aaPredicted RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms