RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 EID3Q8N140 333 aa15.14■□□□□ 0.01
COMMD4-224ENST00000568877 GALNT11Q8NCW6 608 aa15.14■□□□□ 0.01
COMMD4-224ENST00000568877 OR52E4Q8NGH9 312 aa15.14■□□□□ 0.01
COMMD4-224ENST00000568877 OR6T1Q8NGN1 323 aa15.14■□□□□ 0.01
COMMD4-224ENST00000568877 OR10Q1Q8NGQ4 319 aa15.14■□□□□ 0.01
COMMD4-224ENST00000568877 VANGL1Q8TAA9 524 aaPredicted RBP15.14■□□□□ 0.01
COMMD4-224ENST00000568877 MCUR1Q96AQ8 359 aa15.14■□□□□ 0.01
COMMD4-224ENST00000568877 NSMCE2Q96MF7 247 aa15.14■□□□□ 0.01
COMMD4-224ENST00000568877 ACTR3BQ9P1U1 418 aa15.14■□□□□ 0.01
COMMD4-224ENST00000568877 TNFRSF10DQ9UBN6 386 aa15.14■□□□□ 0.01
COMMD4-224ENST00000568877 SLC9A8Q9Y2E8 581 aa15.14■□□□□ 0.01
COMMD4-224ENST00000568877 ZNF337Q9Y3M9 751 aa15.14■□□□□ 0.01
COMMD4-224ENST00000568877 CFAP46Q8IYW2 2715 aa15.14■□□□□ 0.01
COMMD4-224ENST00000568877 NPIPA2E9PIF3 369 aa15.13■□□□□ 0.01
COMMD4-224ENST00000568877 NPIPA3F8WFD2 350 aa15.13■□□□□ 0.01
COMMD4-224ENST00000568877 BCKDKO14874 412 aa15.13■□□□□ 0.01
COMMD4-224ENST00000568877 WISP1O95388 367 aa15.13■□□□□ 0.01
COMMD4-224ENST00000568877 SLC1A3P43003 542 aa15.13■□□□□ 0.01
COMMD4-224ENST00000568877 STARP49675 285 aa15.13■□□□□ 0.01
COMMD4-224ENST00000568877 MS4A2Q01362 244 aa15.13■□□□□ 0.01
COMMD4-224ENST00000568877 MERTKQ12866 999 aa15.13■□□□□ 0.01
COMMD4-224ENST00000568877 WBP2NLQ6ICG8 309 aa15.13■□□□□ 0.01
COMMD4-224ENST00000568877 ENPP6Q6UWR7 440 aa15.13■□□□□ 0.01
COMMD4-224ENST00000568877 PLEKHM3Q6ZWE6 761 aa15.13■□□□□ 0.01
COMMD4-224ENST00000568877 GRINAQ7Z429 371 aa15.13■□□□□ 0.01
COMMD4-224ENST00000568877 VTCN1Q7Z7D3 282 aa15.13■□□□□ 0.01
COMMD4-224ENST00000568877 RANBP3LQ86VV4 465 aaPredicted RBP15.13■□□□□ 0.01
COMMD4-224ENST00000568877 ATCAYQ86WG3 371 aa15.13■□□□□ 0.01
COMMD4-224ENST00000568877 CARM1Q86X55 608 aa15.13■□□□□ 0.01
COMMD4-224ENST00000568877 DHFR2Q86XF0 187 aa15.13■□□□□ 0.01
COMMD4-224ENST00000568877 RBM45Q8IUH3 476 aaKnown RBP15.13■□□□□ 0.01
COMMD4-224ENST00000568877 ULK2Q8IYT8 1036 aa15.13■□□□□ 0.01
COMMD4-224ENST00000568877 CADM2Q8N3J6 435 aa15.13■□□□□ 0.01
COMMD4-224ENST00000568877 OR4D11Q8NGI4 311 aa15.13■□□□□ 0.01
COMMD4-224ENST00000568877 CCDC124Q96CT7 223 aaKnown RBP15.13■□□□□ 0.01
COMMD4-224ENST00000568877 ASB9Q96DX5 294 aa15.13■□□□□ 0.01
COMMD4-224ENST00000568877 TIMP4Q99727 224 aa15.13■□□□□ 0.01
COMMD4-224ENST00000568877 ZNF559Q9BR84 538 aa15.13■□□□□ 0.01
COMMD4-224ENST00000568877 PRR14Q9BWN1 585 aa15.13■□□□□ 0.01
COMMD4-224ENST00000568877 TRIM2Q9C040 744 aa15.13■□□□□ 0.01
COMMD4-224ENST00000568877 TESQ9UGI8 421 aaKnown RBP15.13■□□□□ 0.01
COMMD4-224ENST00000568877 ACAD8Q9UKU7 415 aa15.13■□□□□ 0.01
COMMD4-224ENST00000568877 SAMD4AQ9UPU9 718 aaKnown RBP15.13■□□□□ 0.01
COMMD4-224ENST00000568877 ZNF835Q9Y2P0 537 aa15.13■□□□□ 0.01
COMMD4-224ENST00000568877 AP4B1Q9Y6B7 739 aa15.13■□□□□ 0.01
COMMD4-224ENST00000568877 PRRC2CQ9Y520 2896 aaKnown RBP15.13■□□□□ 0.01
COMMD4-224ENST00000568877 H3BML4 177 aa15.12■□□□□ 0.01
COMMD4-224ENST00000568877 TPST2O60704 377 aa15.12■□□□□ 0.01
COMMD4-224ENST00000568877 FMO6PO60774 539 aa15.12■□□□□ 0.01
COMMD4-224ENST00000568877 PEPDP12955 493 aa15.12■□□□□ 0.01
COMMD4-224ENST00000568877 ABOP16442 354 aa15.12■□□□□ 0.01
COMMD4-224ENST00000568877 POU3F2P20265 443 aaPredicted RBP15.12■□□□□ 0.01
COMMD4-224ENST00000568877 TNFRSF1BP20333 461 aa15.12■□□□□ 0.01
COMMD4-224ENST00000568877 HTR2AP28223 471 aa15.12■□□□□ 0.01
COMMD4-224ENST00000568877 ELK4P28324 431 aa15.12■□□□□ 0.01
COMMD4-224ENST00000568877 APOBEC1P41238 236 aaKnown RBP15.12■□□□□ 0.01
COMMD4-224ENST00000568877 HTR3AP46098 478 aa15.12■□□□□ 0.01
COMMD4-224ENST00000568877 OR1E2P47887 323 aa15.12■□□□□ 0.01
COMMD4-224ENST00000568877 LHX2P50458 406 aa15.12■□□□□ 0.01
COMMD4-224ENST00000568877 TRAP1Q12931 704 aaKnown RBP15.12■□□□□ 0.01
COMMD4-224ENST00000568877 MRPL49Q13405 166 aaKnown RBP15.12■□□□□ 0.01
COMMD4-224ENST00000568877 NPTX1Q15818 432 aa15.12■□□□□ 0.01
COMMD4-224ENST00000568877 BCL2A1Q16548 175 aa15.12■□□□□ 0.01
COMMD4-224ENST00000568877 DCST1Q5T197 706 aa15.12■□□□□ 0.01
COMMD4-224ENST00000568877 LCN8Q6JVE9 175 aa15.12■□□□□ 0.01
COMMD4-224ENST00000568877 CYP2R1Q6VVX0 501 aa15.12■□□□□ 0.01
COMMD4-224ENST00000568877 FKBP9P1Q75LS8 142 aa15.12■□□□□ 0.01
COMMD4-224ENST00000568877 ASRGL1Q7L266 308 aa15.12■□□□□ 0.01
COMMD4-224ENST00000568877 LSMEM1Q8N8F7 131 aa15.12■□□□□ 0.01
COMMD4-224ENST00000568877 FAM57AQ8TBR7 257 aa15.12■□□□□ 0.01
COMMD4-224ENST00000568877 HSH2DQ96JZ2 352 aa15.12■□□□□ 0.01
COMMD4-224ENST00000568877 MCHR1Q99705 422 aa15.12■□□□□ 0.01
COMMD4-224ENST00000568877 ADAM19Q9H013 955 aa15.12■□□□□ 0.01
COMMD4-224ENST00000568877 MMADHCQ9H3L0 296 aaPredicted RBP15.12■□□□□ 0.01
COMMD4-224ENST00000568877 TMEM27Q9HBJ8 222 aa15.12■□□□□ 0.01
COMMD4-224ENST00000568877 STOML1Q9UBI4 398 aa15.12■□□□□ 0.01
COMMD4-224ENST00000568877 PCNX3Q9H6A9 2034 aa15.11■□□□□ 0.01
COMMD4-224ENST00000568877 ACOT8O14734 319 aa15.11■□□□□ 0.01
COMMD4-224ENST00000568877 EFNA2O43921 213 aa15.11■□□□□ 0.01
COMMD4-224ENST00000568877 SLC19A2O60779 497 aa15.11■□□□□ 0.01
COMMD4-224ENST00000568877 PRKD3O94806 890 aa15.11■□□□□ 0.01
COMMD4-224ENST00000568877 STAMBPO95630 424 aa15.11■□□□□ 0.01
COMMD4-224ENST00000568877 TPOP07202 933 aa15.11■□□□□ 0.01
COMMD4-224ENST00000568877 IL11P20809 199 aa15.11■□□□□ 0.01
COMMD4-224ENST00000568877 ATP6V1B2P21281 511 aa15.11■□□□□ 0.01
COMMD4-224ENST00000568877 TACR3P29371 465 aa15.11■□□□□ 0.01
COMMD4-224ENST00000568877 POLR2HP52434 150 aaKnown RBP15.11■□□□□ 0.01
COMMD4-224ENST00000568877 RAC1P63000 192 aa15.11■□□□□ 0.01
COMMD4-224ENST00000568877 GXYLT1Q4G148 440 aa15.11■□□□□ 0.01
COMMD4-224ENST00000568877 IFI44LQ53G44 452 aa15.11■□□□□ 0.01
COMMD4-224ENST00000568877 MTX3Q5HYI7 312 aa15.11■□□□□ 0.01
COMMD4-224ENST00000568877 WLSQ5T9L3 541 aa15.11■□□□□ 0.01
COMMD4-224ENST00000568877 POMZP3Q6PJE2 187 aa15.11■□□□□ 0.01
COMMD4-224ENST00000568877 Q6ZPB1 254 aaPredicted RBP15.11■□□□□ 0.01
COMMD4-224ENST00000568877 GEMIN6Q8WXD5 167 aaKnown RBP15.11■□□□□ 0.01
COMMD4-224ENST00000568877 WDYHV1Q96HA8 205 aa15.11■□□□□ 0.01
COMMD4-224ENST00000568877 PRDM14Q9GZV8 571 aa15.11■□□□□ 0.01
COMMD4-224ENST00000568877 CTPS2Q9NRF8 586 aa15.11■□□□□ 0.01
COMMD4-224ENST00000568877 SERINC1Q9NRX5 453 aa15.11■□□□□ 0.01
COMMD4-224ENST00000568877 RPS6KB2Q9UBS0 482 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms