RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 RNF113BQ8IZP6 322 aaKnown RBP20.03■□□□□ 0.8
LINC01960-201ENST00000563759 C8orf59Q8N0T1 100 aaPredicted RBP20.03■□□□□ 0.8
LINC01960-201ENST00000563759 GNPDA2Q8TDQ7 276 aa20.03■□□□□ 0.8
LINC01960-201ENST00000563759 HS6ST2Q96MM7 605 aa20.03■□□□□ 0.8
LINC01960-201ENST00000563759 MUS81Q96NY9 551 aa20.03■□□□□ 0.8
LINC01960-201ENST00000563759 NR1H4Q96RI1 486 aaPredicted RBP20.03■□□□□ 0.8
LINC01960-201ENST00000563759 MED31Q9Y3C7 131 aa20.03■□□□□ 0.8
LINC01960-201ENST00000563759 GMPPBQ9Y5P6 360 aa20.03■□□□□ 0.8
LINC01960-201ENST00000563759 SOX14O95416 240 aa20.02■□□□□ 0.8
LINC01960-201ENST00000563759 GSTM3P21266 225 aa20.02■□□□□ 0.8
LINC01960-201ENST00000563759 CASP3P42574 277 aa20.02■□□□□ 0.8
LINC01960-201ENST00000563759 RBM34P42696 430 aaKnown RBP20.02■□□□□ 0.8
LINC01960-201ENST00000563759 GPR4P46093 362 aa20.02■□□□□ 0.8
LINC01960-201ENST00000563759 OMPP47874 163 aa20.02■□□□□ 0.8
LINC01960-201ENST00000563759 GSSP48637 474 aa20.02■□□□□ 0.8
LINC01960-201ENST00000563759 GAS1P54826 345 aa20.02■□□□□ 0.8
LINC01960-201ENST00000563759 PRAMEF20Q5VT98 475 aa20.02■□□□□ 0.8
LINC01960-201ENST00000563759 TTC33Q6PID6 262 aaPredicted RBP20.02■□□□□ 0.8
LINC01960-201ENST00000563759 PFN4Q8NHR9 129 aa20.02■□□□□ 0.8
LINC01960-201ENST00000563759 KLHDC3Q9BQ90 382 aa20.02■□□□□ 0.8
LINC01960-201ENST00000563759 PCDHGB5Q9Y5G0 923 aa20.02■□□□□ 0.8
LINC01960-201ENST00000563759 ELOA3DA6NLF2 546 aaPredicted RBP20.01■□□□□ 0.79
LINC01960-201ENST00000563759 H3BN98 237 aa20.01■□□□□ 0.79
LINC01960-201ENST00000563759 OSMP13725 252 aa20.01■□□□□ 0.79
LINC01960-201ENST00000563759 SLC1A3P43003 542 aa20.01■□□□□ 0.79
LINC01960-201ENST00000563759 COX10Q12887 443 aa20.01■□□□□ 0.79
LINC01960-201ENST00000563759 SRSF6Q13247 344 aaKnown RBP20.01■□□□□ 0.79
LINC01960-201ENST00000563759 KEAP1Q14145 624 aa20.01■□□□□ 0.79
LINC01960-201ENST00000563759 ELOA3BQ3SY89 546 aa20.01■□□□□ 0.79
LINC01960-201ENST00000563759 ELOA3Q8NG57 546 aa20.01■□□□□ 0.79
LINC01960-201ENST00000563759 PSMF1Q92530 271 aa20.01■□□□□ 0.79
LINC01960-201ENST00000563759 SECISBP2Q96T21 854 aaKnown RBP20.01■□□□□ 0.79
LINC01960-201ENST00000563759 LHPPQ9H008 270 aa20.01■□□□□ 0.79
LINC01960-201ENST00000563759 ANKRD10Q9NXR5 420 aa20.01■□□□□ 0.79
LINC01960-201ENST00000563759 PRKAR1AP10644 381 aa20.01■□□□□ 0.79
LINC01960-201ENST00000563759 PNMTP11086 282 aa20.01■□□□□ 0.79
LINC01960-201ENST00000563759 IFI30P13284 250 aa20.01■□□□□ 0.79
LINC01960-201ENST00000563759 MST1P26927 711 aa20.01■□□□□ 0.79
LINC01960-201ENST00000563759 POU1F1P28069 291 aa20.01■□□□□ 0.79
LINC01960-201ENST00000563759 PTGDSP41222 190 aa20.01■□□□□ 0.79
LINC01960-201ENST00000563759 ESRRGP62508 458 aa20.01■□□□□ 0.79
LINC01960-201ENST00000563759 TSPAN31Q12999 210 aa20.01■□□□□ 0.79
LINC01960-201ENST00000563759 SNTA1Q13424 505 aa20.01■□□□□ 0.79
LINC01960-201ENST00000563759 IL18R1Q13478 541 aa20.01■□□□□ 0.79
LINC01960-201ENST00000563759 CDK20Q8IZL9 346 aa20.01■□□□□ 0.79
LINC01960-201ENST00000563759 CYP4Z2PQ8N1L4 340 aa20.01■□□□□ 0.79
LINC01960-201ENST00000563759 BEST3Q8N1M1 668 aa20.01■□□□□ 0.79
LINC01960-201ENST00000563759 GPA33Q99795 319 aa20.01■□□□□ 0.79
LINC01960-201ENST00000563759 ZNF426Q9BUY5 554 aa20.01■□□□□ 0.79
LINC01960-201ENST00000563759 A0A087WUJ7 227 aa20■□□□□ 0.79
LINC01960-201ENST00000563759 GP1BBP13224 206 aa20■□□□□ 0.79
LINC01960-201ENST00000563759 FPR3P25089 353 aa20■□□□□ 0.79
LINC01960-201ENST00000563759 CHN2P52757 468 aa20■□□□□ 0.79
LINC01960-201ENST00000563759 SUMO3P55854 103 aaPredicted RBP20■□□□□ 0.79
LINC01960-201ENST00000563759 CLN3Q13286 438 aa20■□□□□ 0.79
LINC01960-201ENST00000563759 QPRTQ15274 297 aa20■□□□□ 0.79
LINC01960-201ENST00000563759 TOMM34Q15785 309 aaPredicted RBP20■□□□□ 0.79
LINC01960-201ENST00000563759 UGT2A3Q6UWM9 527 aa20■□□□□ 0.79
LINC01960-201ENST00000563759 CD300LDQ6UXZ3 194 aa20■□□□□ 0.79
LINC01960-201ENST00000563759 SETD9Q8NE22 299 aa20■□□□□ 0.79
LINC01960-201ENST00000563759 THAP4Q8WY91 577 aa20■□□□□ 0.79
LINC01960-201ENST00000563759 APOL4Q9BPW4 351 aa20■□□□□ 0.79
LINC01960-201ENST00000563759 ING2Q9H160 280 aa20■□□□□ 0.79
LINC01960-201ENST00000563759 PNPLA3Q9NST1 481 aa20■□□□□ 0.79
LINC01960-201ENST00000563759 C20orf141Q9NUB4 165 aa20■□□□□ 0.79
LINC01960-201ENST00000563759 REV1Q9UBZ9 1251 aa20■□□□□ 0.79
LINC01960-201ENST00000563759 NDRG4Q9ULP0 352 aaKnown RBP20■□□□□ 0.79
LINC01960-201ENST00000563759 TMEM5Q9Y2B1 443 aa20■□□□□ 0.79
LINC01960-201ENST00000563759 ANKUB1A6NFN9 424 aa19.99■□□□□ 0.79
LINC01960-201ENST00000563759 ARGFXA6NJG6 315 aa19.99■□□□□ 0.79
LINC01960-201ENST00000563759 CDC40O60508 579 aaKnown RBP eCLIP19.99■□□□□ 0.79
LINC01960-201ENST00000563759 CCL3P10147 92 aa19.99■□□□□ 0.79
LINC01960-201ENST00000563759 CHMP24386 653 aa19.99■□□□□ 0.79
LINC01960-201ENST00000563759 TACR3P29371 465 aa19.99■□□□□ 0.79
LINC01960-201ENST00000563759 RRADP55042 308 aa19.99■□□□□ 0.79
LINC01960-201ENST00000563759 RAPSNQ13702 412 aa19.99■□□□□ 0.79
LINC01960-201ENST00000563759 ZNF468Q5VIY5 522 aaPredicted RBP19.99■□□□□ 0.79
LINC01960-201ENST00000563759 ABHD17BQ5VST6 288 aa19.99■□□□□ 0.79
LINC01960-201ENST00000563759 ZNF691Q5VV52 312 aa19.99■□□□□ 0.79
LINC01960-201ENST00000563759 SLC22A10Q63ZE4 541 aa19.99■□□□□ 0.79
LINC01960-201ENST00000563759 ISLR2Q6UXK2 745 aa19.99■□□□□ 0.79
LINC01960-201ENST00000563759 LINC00114Q6XXX2 140 aa19.99■□□□□ 0.79
LINC01960-201ENST00000563759 Q6ZPB1 254 aaPredicted RBP19.99■□□□□ 0.79
LINC01960-201ENST00000563759 RTL4Q6ZR62 310 aa19.99■□□□□ 0.79
LINC01960-201ENST00000563759 ATG4DQ86TL0 474 aaPredicted RBP19.99■□□□□ 0.79
LINC01960-201ENST00000563759 GPR119Q8TDV5 335 aa19.99■□□□□ 0.79
LINC01960-201ENST00000563759 PAQR8Q8TEZ7 354 aa19.99■□□□□ 0.79
LINC01960-201ENST00000563759 BPIFA2Q96DR5 249 aa19.99■□□□□ 0.79
LINC01960-201ENST00000563759 HRASLS5Q96KN8 279 aa19.99■□□□□ 0.79
LINC01960-201ENST00000563759 SGCZQ96LD1 299 aa19.99■□□□□ 0.79
LINC01960-201ENST00000563759 CCNL2Q96S94 520 aaPredicted RBP19.99■□□□□ 0.79
LINC01960-201ENST00000563759 PITX2Q99697 317 aa19.99■□□□□ 0.79
LINC01960-201ENST00000563759 HHATLQ9HCP6 504 aa19.99■□□□□ 0.79
LINC01960-201ENST00000563759 TAS2R10Q9NYW0 307 aa19.99■□□□□ 0.79
LINC01960-201ENST00000563759 MED11Q9P086 117 aa19.99■□□□□ 0.79
LINC01960-201ENST00000563759 ABI3Q9P2A4 366 aa19.99■□□□□ 0.79
LINC01960-201ENST00000563759 SPINK2P20155 84 aa19.99■□□□□ 0.79
LINC01960-201ENST00000563759 CRISP1P54107 249 aa19.99■□□□□ 0.79
LINC01960-201ENST00000563759 PRKCDQ05655 676 aa19.99■□□□□ 0.79
LINC01960-201ENST00000563759 SLC30A6Q6NXT4 461 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms