RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 SLC7A2P52569 658 aa4.65□□□□□ -1.67
VPS35P1-201ENST00000563400 UBE2G2P60604 165 aa4.65□□□□□ -1.67
VPS35P1-201ENST00000563400 OSTNP61366 133 aa4.65□□□□□ -1.67
VPS35P1-201ENST00000563400 DR1Q01658 176 aa4.65□□□□□ -1.67
VPS35P1-201ENST00000563400 OC90Q02509 493 aaPredicted RBP4.65□□□□□ -1.67
VPS35P1-201ENST00000563400 PNOCQ13519 176 aa4.65□□□□□ -1.67
VPS35P1-201ENST00000563400 CEACAM7Q14002 265 aa4.65□□□□□ -1.67
VPS35P1-201ENST00000563400 CRMP1Q14194 572 aa4.65□□□□□ -1.67
VPS35P1-201ENST00000563400 GANABQ14697 944 aaKnown RBP4.65□□□□□ -1.67
VPS35P1-201ENST00000563400 XKR4Q5GH76 650 aa4.65□□□□□ -1.67
VPS35P1-201ENST00000563400 TMEM64Q6YI46 380 aa4.65□□□□□ -1.67
VPS35P1-201ENST00000563400 TPGS1Q6ZTW0 290 aa4.65□□□□□ -1.67
VPS35P1-201ENST00000563400 H2BFWTQ7Z2G1 175 aa4.65□□□□□ -1.67
VPS35P1-201ENST00000563400 PLCZ1Q86YW0 608 aa4.65□□□□□ -1.67
VPS35P1-201ENST00000563400 GBGT1Q8N5D6 347 aa4.65□□□□□ -1.67
VPS35P1-201ENST00000563400 TMEM99Q8N816 258 aa4.65□□□□□ -1.67
VPS35P1-201ENST00000563400 TEX45Q8NA69 505 aa4.65□□□□□ -1.67
VPS35P1-201ENST00000563400 OR1F12Q8NHA8 337 aa4.65□□□□□ -1.67
VPS35P1-201ENST00000563400 ZNF461Q8TAF7 563 aa4.65□□□□□ -1.67
VPS35P1-201ENST00000563400 SPPL2BQ8TCT7 592 aa4.65□□□□□ -1.67
VPS35P1-201ENST00000563400 TANKQ92844 425 aa4.65□□□□□ -1.67
VPS35P1-201ENST00000563400 EME1Q96AY2 570 aa4.65□□□□□ -1.67
VPS35P1-201ENST00000563400 CCDC127Q96BQ5 260 aa4.65□□□□□ -1.67
VPS35P1-201ENST00000563400 MTBPQ96DY7 904 aa4.65□□□□□ -1.67
VPS35P1-201ENST00000563400 FMO2Q99518 471 aa4.65□□□□□ -1.67
VPS35P1-201ENST00000563400 KXD1Q9BQD3 176 aa4.65□□□□□ -1.67
VPS35P1-201ENST00000563400 RAB11FIP5Q9BXF6 653 aa4.65□□□□□ -1.67
VPS35P1-201ENST00000563400 POTEKPQ9BYX7 375 aa4.65□□□□□ -1.67
VPS35P1-201ENST00000563400 ARRDC1-AS1Q9H2J1 176 aa4.65□□□□□ -1.67
VPS35P1-201ENST00000563400 RNF121Q9H920 327 aa4.65□□□□□ -1.67
VPS35P1-201ENST00000563400 UGT1A10Q9HAW8 530 aa4.65□□□□□ -1.67
VPS35P1-201ENST00000563400 MSL2Q9HCI7 577 aa4.65□□□□□ -1.67
VPS35P1-201ENST00000563400 DYRK4Q9NR20 520 aa4.65□□□□□ -1.67
VPS35P1-201ENST00000563400 MED17Q9NVC6 651 aa4.65□□□□□ -1.67
VPS35P1-201ENST00000563400 C2orf42Q9NWW7 574 aa4.65□□□□□ -1.67
VPS35P1-201ENST00000563400 ADA2Q9NZK5 511 aa4.65□□□□□ -1.67
VPS35P1-201ENST00000563400 PRPF19Q9UMS4 504 aaKnown RBP4.65□□□□□ -1.67
VPS35P1-201ENST00000563400 FLVCR2Q9UPI3 526 aa4.65□□□□□ -1.67
VPS35P1-201ENST00000563400 POLDIP2Q9Y2S7 368 aa4.65□□□□□ -1.67
VPS35P1-201ENST00000563400 COLEC10Q9Y6Z7 277 aa4.65□□□□□ -1.67
VPS35P1-201ENST00000563400 TRBV11-1A0A0K0K1C0 115 aa4.64□□□□□ -1.67
VPS35P1-201ENST00000563400 LINC01553A4QN01 128 aa4.64□□□□□ -1.67
VPS35P1-201ENST00000563400 NPEPPSL1A6NEC2 478 aa4.64□□□□□ -1.67
VPS35P1-201ENST00000563400 LINC00473A8K010 186 aa4.64□□□□□ -1.67
VPS35P1-201ENST00000563400 C1QTNF3-AMACRE9PGA6 284 aa4.64□□□□□ -1.67
VPS35P1-201ENST00000563400 GAPDHSO14556 408 aaPredicted RBP4.64□□□□□ -1.67
VPS35P1-201ENST00000563400 CYB561D2O14569 222 aa4.64□□□□□ -1.67
VPS35P1-201ENST00000563400 MID1O15344 667 aa4.64□□□□□ -1.67
VPS35P1-201ENST00000563400 PEX1O43933 1283 aa4.64□□□□□ -1.67
VPS35P1-201ENST00000563400 GLUD1P00367 558 aa4.64□□□□□ -1.67
VPS35P1-201ENST00000563400 MT-ND2P03891 347 aa4.64□□□□□ -1.67
VPS35P1-201ENST00000563400 FCER2P06734 321 aa4.64□□□□□ -1.67
VPS35P1-201ENST00000563400 ALOX5P09917 674 aa4.64□□□□□ -1.67
VPS35P1-201ENST00000563400 UQCRBP14927 111 aa4.64□□□□□ -1.67
VPS35P1-201ENST00000563400 ZNF23P17027 643 aa4.64□□□□□ -1.67
VPS35P1-201ENST00000563400 POLR2CP19387 275 aaPredicted RBP4.64□□□□□ -1.67
VPS35P1-201ENST00000563400 PSMB6P28072 239 aa4.64□□□□□ -1.67
VPS35P1-201ENST00000563400 TACR3P29371 465 aa4.64□□□□□ -1.67
VPS35P1-201ENST00000563400 MAT2AP31153 395 aaKnown RBP4.64□□□□□ -1.67
VPS35P1-201ENST00000563400 STK19P49842 368 aaPredicted RBP4.64□□□□□ -1.67
VPS35P1-201ENST00000563400 ERVK-8P63133 956 aa4.64□□□□□ -1.67
VPS35P1-201ENST00000563400 PLOD1Q02809 727 aaPredicted RBP4.64□□□□□ -1.67
VPS35P1-201ENST00000563400 SRYQ05066 204 aa4.64□□□□□ -1.67
VPS35P1-201ENST00000563400 DMC1Q14565 340 aa4.64□□□□□ -1.67
VPS35P1-201ENST00000563400 UPP1Q16831 310 aa4.64□□□□□ -1.67
VPS35P1-201ENST00000563400 EXOC3L4Q17RC7 722 aa4.64□□□□□ -1.67
VPS35P1-201ENST00000563400 C18orf21Q32NC0 220 aaPredicted RBP4.64□□□□□ -1.67
VPS35P1-201ENST00000563400 AARS2Q5JTZ9 985 aaKnown RBP4.64□□□□□ -1.67
VPS35P1-201ENST00000563400 ASPHD1Q5U4P2 390 aa4.64□□□□□ -1.67
VPS35P1-201ENST00000563400 VITQ6UXI7 678 aa4.64□□□□□ -1.67
VPS35P1-201ENST00000563400 ALKAL1Q6UXT8 129 aa4.64□□□□□ -1.67
VPS35P1-201ENST00000563400 TMIGD1Q6UXZ0 262 aa4.64□□□□□ -1.67
VPS35P1-201ENST00000563400 RAD9BQ6WBX8 426 aa4.64□□□□□ -1.67
VPS35P1-201ENST00000563400 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.64□□□□□ -1.67
VPS35P1-201ENST00000563400 CATSPERDQ86XM0 798 aa4.64□□□□□ -1.67
VPS35P1-201ENST00000563400 MAP7D3Q8IWC1 876 aa4.64□□□□□ -1.67
VPS35P1-201ENST00000563400 DAW1Q8N136 415 aa4.64□□□□□ -1.67
VPS35P1-201ENST00000563400 ARHGAP18Q8N392 663 aa4.64□□□□□ -1.67
VPS35P1-201ENST00000563400 CPSF7Q8N684 471 aaKnown RBP4.64□□□□□ -1.67
VPS35P1-201ENST00000563400 DEFB123Q8N688 67 aa4.64□□□□□ -1.67
VPS35P1-201ENST00000563400 ZNF781Q8N8C0 355 aa4.64□□□□□ -1.67
VPS35P1-201ENST00000563400 CYB561A3Q8NBI2 242 aa4.64□□□□□ -1.67
VPS35P1-201ENST00000563400 CCDC197Q8NCU1 140 aa4.64□□□□□ -1.67
VPS35P1-201ENST00000563400 FBXO36Q8NEA4 188 aa4.64□□□□□ -1.67
VPS35P1-201ENST00000563400 STXBP6Q8NFX7 210 aa4.64□□□□□ -1.67
VPS35P1-201ENST00000563400 OR7G2Q8NG99 324 aa4.64□□□□□ -1.67
VPS35P1-201ENST00000563400 OR8J2Q8NGG1 315 aa4.64□□□□□ -1.67
VPS35P1-201ENST00000563400 LRRC15Q8TF66 581 aa4.64□□□□□ -1.67
VPS35P1-201ENST00000563400 CCDC107Q8WV48 283 aa4.64□□□□□ -1.67
VPS35P1-201ENST00000563400 NUDCD2Q8WVJ2 157 aa4.64□□□□□ -1.67
VPS35P1-201ENST00000563400 CHMP6Q96FZ7 201 aa4.64□□□□□ -1.67
VPS35P1-201ENST00000563400 EFHD1Q9BUP0 239 aa4.64□□□□□ -1.67
VPS35P1-201ENST00000563400 MEGF9Q9H1U4 602 aa4.64□□□□□ -1.67
VPS35P1-201ENST00000563400 CXXC4Q9H2H0 198 aa4.64□□□□□ -1.67
VPS35P1-201ENST00000563400 CLK4Q9HAZ1 481 aaKnown RBP4.64□□□□□ -1.67
VPS35P1-201ENST00000563400 TXLNGQ9NUQ3 528 aa4.64□□□□□ -1.67
VPS35P1-201ENST00000563400 MAN1B1Q9UKM7 699 aa4.64□□□□□ -1.67
VPS35P1-201ENST00000563400 POMT2Q9UKY4 750 aa4.64□□□□□ -1.67
VPS35P1-201ENST00000563400 YIPF1Q9Y548 306 aa4.64□□□□□ -1.67
VPS35P1-201ENST00000563400 TIMM10BQ9Y5J6 103 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms