RNA–Protein interactions for RNA: ENST00000563200.5

PPP4C-205, Transcript of protein phosphatase 4 catalytic subunit, human

TSL 5

Gene PPP4C, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4C-205	ENST00000563200	TIGAR	Q9NQ88	270 aa		19.43	■□□□□ 0.7
PPP4C-205	ENST00000563200	SLC6A13	Q9NSD5	602 aa		19.43	■□□□□ 0.7
PPP4C-205	ENST00000563200	SLC35A3	Q9Y2D2	325 aa		19.43	■□□□□ 0.7
PPP4C-205	ENST00000563200	SLC22A3	O75751	556 aa		19.42	■□□□□ 0.7
PPP4C-205	ENST00000563200	ATE1	O95260	518 aa		19.42	■□□□□ 0.7
PPP4C-205	ENST00000563200	H6PD	O95479	791 aa		19.42	■□□□□ 0.7
PPP4C-205	ENST00000563200	IL6	P05231	212 aa		19.42	■□□□□ 0.7
PPP4C-205	ENST00000563200	GSN	P06396	782 aa		19.42	■□□□□ 0.7
PPP4C-205	ENST00000563200	PABPC4L	P0CB38	370 aa	Known RBP	19.42	■□□□□ 0.7
PPP4C-205	ENST00000563200	DNASE1	P24855	282 aa		19.42	■□□□□ 0.7
PPP4C-205	ENST00000563200	SESN3	P58005	492 aa		19.42	■□□□□ 0.7
PPP4C-205	ENST00000563200	TXNL4A	P83876	142 aa	Known RBP	19.42	■□□□□ 0.7
PPP4C-205	ENST00000563200	GSTA3	Q16772	222 aa		19.42	■□□□□ 0.7
PPP4C-205	ENST00000563200	GTF2IRD2B	Q6EKJ0	949 aa		19.42	■□□□□ 0.7
PPP4C-205	ENST00000563200	ZNF621	Q6ZSS3	439 aa		19.42	■□□□□ 0.7
PPP4C-205	ENST00000563200	GTF2IRD2	Q86UP8	949 aa		19.42	■□□□□ 0.7
PPP4C-205	ENST00000563200	ANKFN1	Q8N957	763 aa		19.42	■□□□□ 0.7
PPP4C-205	ENST00000563200	TRNT1	Q96Q11	434 aa	Known RBP	19.42	■□□□□ 0.7
PPP4C-205	ENST00000563200	ZBTB18	Q99592	522 aa		19.42	■□□□□ 0.7
PPP4C-205	ENST00000563200	MED18	Q9BUE0	208 aa		19.42	■□□□□ 0.7
PPP4C-205	ENST00000563200	SLC38A1	Q9H2H9	487 aa		19.42	■□□□□ 0.7
PPP4C-205	ENST00000563200	ZIM2	Q9NZV7	527 aa		19.42	■□□□□ 0.7
PPP4C-205	ENST00000563200	EDAR	Q9UNE0	448 aa		19.42	■□□□□ 0.7
PPP4C-205	ENST00000563200	LIPT1	Q9Y234	373 aa		19.42	■□□□□ 0.7
PPP4C-205	ENST00000563200	NF1	P21359	2839 aa		19.42	■□□□□ 0.7
PPP4C-205	ENST00000563200	CYP7B1	O75881	506 aa		19.42	■□□□□ 0.7
PPP4C-205	ENST00000563200	CRYGS	P22914	178 aa		19.42	■□□□□ 0.7
PPP4C-205	ENST00000563200	MVD	P53602	400 aa		19.42	■□□□□ 0.7
PPP4C-205	ENST00000563200	RNPS1	Q15287	305 aa	Known RBP	19.42	■□□□□ 0.7
PPP4C-205	ENST00000563200	SYPL1	Q16563	259 aa		19.42	■□□□□ 0.7
PPP4C-205	ENST00000563200	COX20	Q5RI15	118 aa		19.42	■□□□□ 0.7
PPP4C-205	ENST00000563200	EPGN	Q6UW88	154 aa		19.42	■□□□□ 0.7
PPP4C-205	ENST00000563200	ZNF550	Q7Z398	422 aa		19.42	■□□□□ 0.7
PPP4C-205	ENST00000563200	HMGN2P46	Q86SG4	172 aa		19.42	■□□□□ 0.7
PPP4C-205	ENST00000563200	ATP6V1C2	Q8NEY4	427 aa		19.42	■□□□□ 0.7
PPP4C-205	ENST00000563200	C7orf26	Q96N11	449 aa		19.42	■□□□□ 0.7
PPP4C-205	ENST00000563200	QRSL1	Q9H0R6	528 aa	Known RBP	19.42	■□□□□ 0.7
PPP4C-205	ENST00000563200	GP6	Q9HCN6	339 aa		19.42	■□□□□ 0.7
PPP4C-205	ENST00000563200	ACER3	Q9NUN7	267 aa		19.42	■□□□□ 0.7
PPP4C-205	ENST00000563200	ZNF226	Q9NYT6	803 aa		19.42	■□□□□ 0.7
PPP4C-205	ENST00000563200	C6orf203	Q9P0P8	240 aa	Predicted RBP	19.42	■□□□□ 0.7
PPP4C-205	ENST00000563200		A0A1W2PNR3	127 aa		19.41	■□□□□ 0.7
PPP4C-205	ENST00000563200	CLDN24	A6NM45	220 aa		19.41	■□□□□ 0.7
PPP4C-205	ENST00000563200	UBD	O15205	165 aa		19.41	■□□□□ 0.7
PPP4C-205	ENST00000563200	ADAM11	O75078	769 aa		19.41	■□□□□ 0.7
PPP4C-205	ENST00000563200	RAF1	P04049	648 aa		19.41	■□□□□ 0.7
PPP4C-205	ENST00000563200	CHRM4	P08173	479 aa		19.41	■□□□□ 0.7
PPP4C-205	ENST00000563200	PGC	P20142	388 aa		19.41	■□□□□ 0.7
PPP4C-205	ENST00000563200	ENPP1	P22413	925 aa		19.41	■□□□□ 0.7
PPP4C-205	ENST00000563200	RAC3	P60763	192 aa		19.41	■□□□□ 0.7
PPP4C-205	ENST00000563200	KCNJ10	P78508	379 aa		19.41	■□□□□ 0.7
PPP4C-205	ENST00000563200	MAPK11	Q15759	364 aa		19.41	■□□□□ 0.7
PPP4C-205	ENST00000563200	EXOC3L2	Q2M3D2	409 aa		19.41	■□□□□ 0.7
PPP4C-205	ENST00000563200	GPAT3	Q53EU6	434 aa		19.41	■□□□□ 0.7
PPP4C-205	ENST00000563200	C3orf33	Q6P1S2	294 aa		19.41	■□□□□ 0.7
PPP4C-205	ENST00000563200	STAC2	Q6ZMT1	411 aa		19.41	■□□□□ 0.7
PPP4C-205	ENST00000563200	FCRLA	Q7L513	359 aa		19.41	■□□□□ 0.7
PPP4C-205	ENST00000563200	TMEM234	Q8WY98	164 aa		19.41	■□□□□ 0.7
PPP4C-205	ENST00000563200	REXO5	Q96IC2	774 aa	Known RBP	19.41	■□□□□ 0.7
PPP4C-205	ENST00000563200	ALPK1	Q96QP1	1244 aa		19.41	■□□□□ 0.7
PPP4C-205	ENST00000563200	KLHL4	Q9C0H6	718 aa		19.41	■□□□□ 0.7
PPP4C-205	ENST00000563200	EXOSC3	Q9NQT5	275 aa	Known RBP	19.41	■□□□□ 0.7
PPP4C-205	ENST00000563200	KLHL13	Q9P2N7	655 aa		19.41	■□□□□ 0.7
PPP4C-205	ENST00000563200	ING1	Q9UK53	422 aa	Predicted RBP	19.41	■□□□□ 0.7
PPP4C-205	ENST00000563200	USH1C	Q9Y6N9	552 aa		19.41	■□□□□ 0.7
PPP4C-205	ENST00000563200	AGAP5	A6NIR3	686 aa		19.4	■□□□□ 0.7
PPP4C-205	ENST00000563200	RFXANK	O14593	260 aa		19.4	■□□□□ 0.7
PPP4C-205	ENST00000563200	TTMP	Q5BVD1	217 aa		19.4	■□□□□ 0.7
PPP4C-205	ENST00000563200	LRRC74B	Q6ZQY2	392 aa		19.4	■□□□□ 0.7
PPP4C-205	ENST00000563200	PLEKHM3	Q6ZWE6	761 aa		19.4	■□□□□ 0.7
PPP4C-205	ENST00000563200	OR9I1	Q8NGQ6	314 aa		19.4	■□□□□ 0.7
PPP4C-205	ENST00000563200	PNPT1	Q8TCS8	783 aa	Known RBP	19.4	■□□□□ 0.7
PPP4C-205	ENST00000563200	ATP6V1G3	Q96LB4	118 aa		19.4	■□□□□ 0.7
PPP4C-205	ENST00000563200	CCDC106	Q9BWC9	280 aa		19.4	■□□□□ 0.7
PPP4C-205	ENST00000563200	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	19.4	■□□□□ 0.7
PPP4C-205	ENST00000563200	DIAPH2	O60879	1101 aa		19.39	■□□□□ 0.69
PPP4C-205	ENST00000563200	PRKD3	O94806	890 aa		19.39	■□□□□ 0.69
PPP4C-205	ENST00000563200	THBD	P07204	575 aa		19.39	■□□□□ 0.69
PPP4C-205	ENST00000563200	ZCCHC18	P0CG32	403 aa		19.39	■□□□□ 0.69
PPP4C-205	ENST00000563200	RPS4Y1	P22090	263 aa	Known RBP	19.39	■□□□□ 0.69
PPP4C-205	ENST00000563200	LOX	P28300	417 aa	Predicted RBP	19.39	■□□□□ 0.69
PPP4C-205	ENST00000563200	SLC7A1	P30825	629 aa		19.39	■□□□□ 0.69
PPP4C-205	ENST00000563200	MAGEA8	P43361	318 aa		19.39	■□□□□ 0.69
PPP4C-205	ENST00000563200	ANXA11	P50995	505 aa	Known RBP	19.39	■□□□□ 0.69
PPP4C-205	ENST00000563200	HPCA	P84074	193 aa		19.39	■□□□□ 0.69
PPP4C-205	ENST00000563200	MERTK	Q12866	999 aa		19.39	■□□□□ 0.69
PPP4C-205	ENST00000563200	ANKRD34A	Q69YU3	496 aa		19.39	■□□□□ 0.69
PPP4C-205	ENST00000563200	MSANTD1	Q6ZTZ1	278 aa		19.39	■□□□□ 0.69
PPP4C-205	ENST00000563200	BEND4	Q6ZU67	534 aa		19.39	■□□□□ 0.69
PPP4C-205	ENST00000563200	NUFIP2	Q7Z417	695 aa	Known RBP	19.39	■□□□□ 0.69
PPP4C-205	ENST00000563200	TUSC5	Q8IXB3	177 aa		19.39	■□□□□ 0.69
PPP4C-205	ENST00000563200	SLC43A2	Q8N370	569 aa		19.39	■□□□□ 0.69
PPP4C-205	ENST00000563200	C12orf49	Q9H741	205 aa		19.39	■□□□□ 0.69
PPP4C-205	ENST00000563200	SLCO1B3	Q9NPD5	702 aa		19.39	■□□□□ 0.69
PPP4C-205	ENST00000563200	ARID1A	O14497	2285 aa		19.38	■□□□□ 0.69
PPP4C-205	ENST00000563200	KRT75	O95678	551 aa		19.38	■□□□□ 0.69
PPP4C-205	ENST00000563200	MRPL19	P49406	292 aa	Known RBP	19.38	■□□□□ 0.69
PPP4C-205	ENST00000563200	POLR2J	P52435	117 aa	Known RBP	19.38	■□□□□ 0.69
PPP4C-205	ENST00000563200	CMIP	Q8IY22	773 aa		19.38	■□□□□ 0.69
PPP4C-205	ENST00000563200	CNOT9	Q92600	299 aa	Known RBP	19.38	■□□□□ 0.69

Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms