RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 GPATCH2Q9NW75 528 aa11.5□□□□□ -0.57
SF3B3-202ENST00000562722 POU2F3Q9UKI9 436 aa11.5□□□□□ -0.57
SF3B3-202ENST00000562722 ZANQ9Y493 2812 aa11.49□□□□□ -0.57
SF3B3-202ENST00000562722 TLDC2A0PJX2 215 aa11.49□□□□□ -0.57
SF3B3-202ENST00000562722 ABCD4O14678 606 aa11.49□□□□□ -0.57
SF3B3-202ENST00000562722 SMAD9O15198 467 aaKnown RBP11.49□□□□□ -0.57
SF3B3-202ENST00000562722 NPHS1O60500 1241 aa11.49□□□□□ -0.57
SF3B3-202ENST00000562722 EIF4E2O60573 245 aaKnown RBP11.49□□□□□ -0.57
SF3B3-202ENST00000562722 CYTIPO60759 359 aa11.49□□□□□ -0.57
SF3B3-202ENST00000562722 SKAP2O75563 359 aaPredicted RBP11.49□□□□□ -0.57
SF3B3-202ENST00000562722 LYPLA1O75608 230 aaPredicted RBP11.49□□□□□ -0.57
SF3B3-202ENST00000562722 H6PDO95479 791 aa11.49□□□□□ -0.57
SF3B3-202ENST00000562722 ALDH3A1P30838 453 aa11.49□□□□□ -0.57
SF3B3-202ENST00000562722 NUDT6P53370 316 aa11.49□□□□□ -0.57
SF3B3-202ENST00000562722 RPS26P62854 115 aaKnown RBP11.49□□□□□ -0.57
SF3B3-202ENST00000562722 MERTKQ12866 999 aa11.49□□□□□ -0.57
SF3B3-202ENST00000562722 NRF1Q16656 503 aa11.49□□□□□ -0.57
SF3B3-202ENST00000562722 AGAP6Q5VW22 663 aa11.49□□□□□ -0.57
SF3B3-202ENST00000562722 IL23RQ5VWK5 629 aa11.49□□□□□ -0.57
SF3B3-202ENST00000562722 PODNL1Q6PEZ8 512 aa11.49□□□□□ -0.57
SF3B3-202ENST00000562722 BHLHB9Q6PI77 547 aa11.49□□□□□ -0.57
SF3B3-202ENST00000562722 GALNT5Q7Z7M9 940 aa11.49□□□□□ -0.57
SF3B3-202ENST00000562722 KRTCAP2Q8N6L1 136 aa11.49□□□□□ -0.57
SF3B3-202ENST00000562722 SFXN5Q8TD22 340 aa11.49□□□□□ -0.57
SF3B3-202ENST00000562722 OR7D2Q96RA2 312 aa11.49□□□□□ -0.57
SF3B3-202ENST00000562722 RHNO1Q9BSD3 238 aa11.49□□□□□ -0.57
SF3B3-202ENST00000562722 THUMPD3Q9BV44 507 aaKnown RBP11.49□□□□□ -0.57
SF3B3-202ENST00000562722 EMC3Q9P0I2 261 aa11.49□□□□□ -0.57
SF3B3-202ENST00000562722 ING1Q9UK53 422 aaPredicted RBP11.49□□□□□ -0.57
SF3B3-202ENST00000562722 CIB4A0PJX0 185 aa11.48□□□□□ -0.57
SF3B3-202ENST00000562722 SERINC4A6NH21 518 aa11.48□□□□□ -0.57
SF3B3-202ENST00000562722 CCT8L1PA6NM43 557 aa11.48□□□□□ -0.57
SF3B3-202ENST00000562722 SHISA9B4DS77 424 aa11.48□□□□□ -0.57
SF3B3-202ENST00000562722 NPIPB9F8W1W9 429 aa11.48□□□□□ -0.57
SF3B3-202ENST00000562722 SULT2B1O00204 365 aa11.48□□□□□ -0.57
SF3B3-202ENST00000562722 RAD51DO75771 328 aa11.48□□□□□ -0.57
SF3B3-202ENST00000562722 CSTAP01040 98 aa11.48□□□□□ -0.57
SF3B3-202ENST00000562722 IGHV3-9P01782 118 aa11.48□□□□□ -0.57
SF3B3-202ENST00000562722 FGF4P08620 206 aa11.48□□□□□ -0.57
SF3B3-202ENST00000562722 UBTFL6P0CB48 400 aaPredicted RBP11.48□□□□□ -0.57
SF3B3-202ENST00000562722 TFPIP10646 304 aa11.48□□□□□ -0.57
SF3B3-202ENST00000562722 IGHV1-2P23083 117 aa11.48□□□□□ -0.57
SF3B3-202ENST00000562722 EDNRAP25101 427 aa11.48□□□□□ -0.57
SF3B3-202ENST00000562722 DIO1P49895 249 aa11.48□□□□□ -0.57
SF3B3-202ENST00000562722 CSNK2A1P68400 391 aaPredicted RBP11.48□□□□□ -0.57
SF3B3-202ENST00000562722 CHRNEQ04844 493 aa11.48□□□□□ -0.57
SF3B3-202ENST00000562722 PGS1Q32NB8 556 aa11.48□□□□□ -0.57
SF3B3-202ENST00000562722 CHRFAM7AQ494W8 412 aa11.48□□□□□ -0.57
SF3B3-202ENST00000562722 SLC25A53Q5H9E4 307 aa11.48□□□□□ -0.57
SF3B3-202ENST00000562722 TIMM23BQ5SRD1 257 aa11.48□□□□□ -0.57
SF3B3-202ENST00000562722 SLC22A25Q6T423 547 aa11.48□□□□□ -0.57
SF3B3-202ENST00000562722 CLEC2AQ6UVW9 174 aa11.48□□□□□ -0.57
SF3B3-202ENST00000562722 SEZ6L2Q6UXD5 910 aa11.48□□□□□ -0.57
SF3B3-202ENST00000562722 ZCCHC23Q6ZST2 131 aa11.48□□□□□ -0.57
SF3B3-202ENST00000562722 SSX8Q7RTT4 187 aa11.48□□□□□ -0.57
SF3B3-202ENST00000562722 C16orf62Q7Z3J2 963 aa11.48□□□□□ -0.57
SF3B3-202ENST00000562722 PSMA8Q8TAA3 256 aa11.48□□□□□ -0.57
SF3B3-202ENST00000562722 TMEM234Q8WY98 164 aa11.48□□□□□ -0.57
SF3B3-202ENST00000562722 ST8SIA1Q92185 356 aa11.48□□□□□ -0.57
SF3B3-202ENST00000562722 ZNF524Q96C55 264 aa11.48□□□□□ -0.57
SF3B3-202ENST00000562722 ZHX1-C8orf76Q96EF9 292 aa11.48□□□□□ -0.57
SF3B3-202ENST00000562722 APOPT1Q96IL0 206 aa11.48□□□□□ -0.57
SF3B3-202ENST00000562722 ADAD1Q96M93 576 aaKnown RBP11.48□□□□□ -0.57
SF3B3-202ENST00000562722 SDF2Q99470 211 aa11.48□□□□□ -0.57
SF3B3-202ENST00000562722 DUSP26Q9BV47 211 aa11.48□□□□□ -0.57
SF3B3-202ENST00000562722 MECRQ9BV79 373 aa11.48□□□□□ -0.57
SF3B3-202ENST00000562722 BHLHE41Q9C0J9 482 aaPredicted RBP11.48□□□□□ -0.57
SF3B3-202ENST00000562722 NPAP1Q9NZP6 1156 aa11.48□□□□□ -0.57
SF3B3-202ENST00000562722 SPIN1Q9Y657 262 aaPredicted RBP11.48□□□□□ -0.57
SF3B3-202ENST00000562722 CHD3Q12873 2000 aaKnown RBP11.47□□□□□ -0.57
SF3B3-202ENST00000562722 OR5H1A6NKK0 313 aa11.47□□□□□ -0.57
SF3B3-202ENST00000562722 DUXAA6NLW8 204 aa11.47□□□□□ -0.57
SF3B3-202ENST00000562722 ZNF724A8MTY0 619 aa11.47□□□□□ -0.57
SF3B3-202ENST00000562722 A8MV72 311 aaPredicted RBP11.47□□□□□ -0.57
SF3B3-202ENST00000562722 STX11O75558 287 aa11.47□□□□□ -0.57
SF3B3-202ENST00000562722 CD8AP01732 235 aa11.47□□□□□ -0.57
SF3B3-202ENST00000562722 PGCP20142 388 aa11.47□□□□□ -0.57
SF3B3-202ENST00000562722 COX5AP20674 150 aa11.47□□□□□ -0.57
SF3B3-202ENST00000562722 PRPS1L1P21108 318 aa11.47□□□□□ -0.57
SF3B3-202ENST00000562722 MATN1P21941 496 aa11.47□□□□□ -0.57
SF3B3-202ENST00000562722 ZNF83P51522 516 aa11.47□□□□□ -0.57
SF3B3-202ENST00000562722 SESN3P58005 492 aa11.47□□□□□ -0.57
SF3B3-202ENST00000562722 HBA1P69905 142 aa11.47□□□□□ -0.57
SF3B3-202ENST00000562722 SKP2Q13309 424 aa11.47□□□□□ -0.57
SF3B3-202ENST00000562722 UGT3A2Q3SY77 523 aa11.47□□□□□ -0.57
SF3B3-202ENST00000562722 SYT14P1Q58G82 188 aa11.47□□□□□ -0.57
SF3B3-202ENST00000562722 XKR7Q5GH72 579 aa11.47□□□□□ -0.57
SF3B3-202ENST00000562722 C6orf136Q5SQH8 315 aa11.47□□□□□ -0.57
SF3B3-202ENST00000562722 KLHL17Q6TDP4 642 aa11.47□□□□□ -0.57
SF3B3-202ENST00000562722 TMEM108Q6UXF1 575 aa11.47□□□□□ -0.57
SF3B3-202ENST00000562722 DNAJC14Q6Y2X3 702 aaPredicted RBP11.47□□□□□ -0.57
SF3B3-202ENST00000562722 EIF3MQ7L2H7 374 aaKnown RBP11.47□□□□□ -0.57
SF3B3-202ENST00000562722 DTX2Q86UW9 622 aa11.47□□□□□ -0.57
SF3B3-202ENST00000562722 P2RY8Q86VZ1 359 aa11.47□□□□□ -0.57
SF3B3-202ENST00000562722 HIPK1Q86Z02 1210 aa11.47□□□□□ -0.57
SF3B3-202ENST00000562722 CLEC4FQ8N1N0 589 aa11.47□□□□□ -0.57
SF3B3-202ENST00000562722 OR52N5Q8NH56 324 aa11.47□□□□□ -0.57
SF3B3-202ENST00000562722 ZNF563Q8TA94 476 aa11.47□□□□□ -0.57
SF3B3-202ENST00000562722 APH1AQ96BI3 265 aa11.47□□□□□ -0.57
SF3B3-202ENST00000562722 TUBGCP3Q96CW5 907 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms