RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 ZNF799Q96GE5 643 aa2.09□□□□□ -2.07
HDGFL3-202ENST00000562702 SPATA13Q96N96 652 aa2.09□□□□□ -2.07
HDGFL3-202ENST00000562702 WRAP53Q9BUR4 548 aaKnown RBP2.09□□□□□ -2.07
HDGFL3-202ENST00000562702 Q9H3A6 140 aa2.09□□□□□ -2.07
HDGFL3-202ENST00000562702 CHMP4BQ9H444 224 aaKnown RBP2.09□□□□□ -2.07
HDGFL3-202ENST00000562702 RWDD1Q9H446 243 aaPredicted RBP2.09□□□□□ -2.07
HDGFL3-202ENST00000562702 MEPEQ9NQ76 525 aaPredicted RBP2.09□□□□□ -2.07
HDGFL3-202ENST00000562702 GALPQ9UBC7 116 aa2.09□□□□□ -2.07
HDGFL3-202ENST00000562702 GHRLQ9UBU3 117 aa2.09□□□□□ -2.07
HDGFL3-202ENST00000562702 KCNN3Q9UGI6 736 aa2.09□□□□□ -2.07
HDGFL3-202ENST00000562702 DUSP12Q9UNI6 340 aa2.09□□□□□ -2.07
HDGFL3-202ENST00000562702 SMC3Q9UQE7 1217 aa2.09□□□□□ -2.07
HDGFL3-202ENST00000562702 EXOSC1Q9Y3B2 195 aaKnown RBP2.09□□□□□ -2.07
HDGFL3-202ENST00000562702 AP1M2Q9Y6Q5 423 aa2.09□□□□□ -2.07
HDGFL3-202ENST00000562702 CDK5RAP2Q96SN8 1893 aa2.09□□□□□ -2.08
HDGFL3-202ENST00000562702 RTL9Q8NET4 1388 aa2.09□□□□□ -2.08
HDGFL3-202ENST00000562702 RIC1Q4ADV7 1423 aa2.08□□□□□ -2.08
HDGFL3-202ENST00000562702 MYO5AQ9Y4I1 1855 aaKnown RBP2.08□□□□□ -2.08
HDGFL3-202ENST00000562702 RNF103-CHMP3A0A140T963 221 aa2.08□□□□□ -2.08
HDGFL3-202ENST00000562702 ERICH4A6NGS2 130 aa2.08□□□□□ -2.08
HDGFL3-202ENST00000562702 ARHGAP42A6NI28 874 aa2.08□□□□□ -2.08
HDGFL3-202ENST00000562702 SLC9B1P1A6NJY1 282 aa2.08□□□□□ -2.08
HDGFL3-202ENST00000562702 CCDC169A6NNP5 214 aa2.08□□□□□ -2.08
HDGFL3-202ENST00000562702 CASQ2O14958 399 aaPredicted RBP2.08□□□□□ -2.08
HDGFL3-202ENST00000562702 ALOX15BO15296 676 aa2.08□□□□□ -2.08
HDGFL3-202ENST00000562702 TM9SF1O15321 606 aa2.08□□□□□ -2.08
HDGFL3-202ENST00000562702 EMC8O43402 210 aa2.08□□□□□ -2.08
HDGFL3-202ENST00000562702 ZBTB14O43829 449 aa2.08□□□□□ -2.08
HDGFL3-202ENST00000562702 SEC22BO75396 215 aa2.08□□□□□ -2.08
HDGFL3-202ENST00000562702 NDUFA7O95182 113 aa2.08□□□□□ -2.08
HDGFL3-202ENST00000562702 IGKV3-11P04433 115 aa2.08□□□□□ -2.08
HDGFL3-202ENST00000562702 RPS2P15880 293 aaKnown RBP2.08□□□□□ -2.08
HDGFL3-202ENST00000562702 HMGB2P26583 209 aaKnown RBP2.08□□□□□ -2.08
HDGFL3-202ENST00000562702 ZNF133P52736 654 aaPredicted RBP2.08□□□□□ -2.08
HDGFL3-202ENST00000562702 HSD17B7P56937 341 aa2.08□□□□□ -2.08
HDGFL3-202ENST00000562702 MRPS6P82932 125 aaKnown RBP2.08□□□□□ -2.08
HDGFL3-202ENST00000562702 IL1RL1Q01638 556 aa2.08□□□□□ -2.08
HDGFL3-202ENST00000562702 OC90Q02509 493 aaPredicted RBP2.08□□□□□ -2.08
HDGFL3-202ENST00000562702 BCL2L1Q07817 233 aa2.08□□□□□ -2.08
HDGFL3-202ENST00000562702 SLX4IPQ5VYV7 408 aa2.08□□□□□ -2.08
HDGFL3-202ENST00000562702 ZNF57Q68EA5 555 aaPredicted RBP2.08□□□□□ -2.08
HDGFL3-202ENST00000562702 OR5M10Q6IEU7 315 aa2.08□□□□□ -2.08
HDGFL3-202ENST00000562702 ZNF562Q6V9R5 426 aa2.08□□□□□ -2.08
HDGFL3-202ENST00000562702 USP50Q70EL3 339 aaPredicted RBP2.08□□□□□ -2.08
HDGFL3-202ENST00000562702 TMEM179BQ7Z7N9 219 aa2.08□□□□□ -2.08
HDGFL3-202ENST00000562702 TGIF2LYQ8IUE0 185 aa2.08□□□□□ -2.08
HDGFL3-202ENST00000562702 CCDC36Q8IYA8 594 aa2.08□□□□□ -2.08
HDGFL3-202ENST00000562702 TTC5Q8N0Z6 440 aa2.08□□□□□ -2.08
HDGFL3-202ENST00000562702 LRRC43Q8N309 656 aa2.08□□□□□ -2.08
HDGFL3-202ENST00000562702 ARFGAP2Q8N6H7 521 aa2.08□□□□□ -2.08
HDGFL3-202ENST00000562702 CCNYQ8ND76 341 aa2.08□□□□□ -2.08
HDGFL3-202ENST00000562702 DENND6BQ8NEG7 585 aa2.08□□□□□ -2.08
HDGFL3-202ENST00000562702 CCDC110Q8TBZ0 833 aa2.08□□□□□ -2.08
HDGFL3-202ENST00000562702 URGCPQ8TCY9 931 aa2.08□□□□□ -2.08
HDGFL3-202ENST00000562702 BRSK1Q8TDC3 778 aa2.08□□□□□ -2.08
HDGFL3-202ENST00000562702 ELSPBP1Q96BH3 223 aa2.08□□□□□ -2.08
HDGFL3-202ENST00000562702 DHTKD1Q96HY7 919 aaPredicted RBP2.08□□□□□ -2.08
HDGFL3-202ENST00000562702 PAIP2Q9BPZ3 127 aaKnown RBP2.08□□□□□ -2.08
HDGFL3-202ENST00000562702 CNPY3Q9BT09 278 aa2.08□□□□□ -2.08
HDGFL3-202ENST00000562702 TCHPQ9BT92 498 aa2.08□□□□□ -2.08
HDGFL3-202ENST00000562702 C1orf21Q9H246 121 aa2.08□□□□□ -2.08
HDGFL3-202ENST00000562702 THAP9Q9H5L6 903 aa2.08□□□□□ -2.08
HDGFL3-202ENST00000562702 PNO1Q9NRX1 252 aaKnown RBP2.08□□□□□ -2.08
HDGFL3-202ENST00000562702 GDAP2Q9NXN4 497 aa2.08□□□□□ -2.08
HDGFL3-202ENST00000562702 AATFQ9NY61 560 aaKnown RBP eCLIP2.08□□□□□ -2.08
HDGFL3-202ENST00000562702 DNPEPQ9ULA0 475 aa2.08□□□□□ -2.08
HDGFL3-202ENST00000562702 STRAPQ9Y3F4 350 aaKnown RBP2.08□□□□□ -2.08
HDGFL3-202ENST00000562702 ATP6V0A2Q9Y487 856 aa2.08□□□□□ -2.08
HDGFL3-202ENST00000562702 PTPRFP10586 1907 aa2.08□□□□□ -2.08
HDGFL3-202ENST00000562702 ABCC4O15439 1325 aa2.08□□□□□ -2.08
HDGFL3-202ENST00000562702 MAP3K15Q6ZN16 1313 aa2.08□□□□□ -2.08
HDGFL3-202ENST00000562702 MYO9BQ13459 2157 aa2.08□□□□□ -2.08
HDGFL3-202ENST00000562702 MYH13Q9UKX3 1938 aa2.07□□□□□ -2.08
HDGFL3-202ENST00000562702 TTC26A0AVF1 554 aa2.07□□□□□ -2.08
HDGFL3-202ENST00000562702 DHRS7CA6NNS2 312 aa2.07□□□□□ -2.08
HDGFL3-202ENST00000562702 E9PLD3 99 aa2.07□□□□□ -2.08
HDGFL3-202ENST00000562702 H3BTX0 84 aa2.07□□□□□ -2.08
HDGFL3-202ENST00000562702 PDXKO00764 312 aa2.07□□□□□ -2.08
HDGFL3-202ENST00000562702 PPIHO43447 177 aaKnown RBP2.07□□□□□ -2.08
HDGFL3-202ENST00000562702 LATO43561 262 aa2.07□□□□□ -2.08
HDGFL3-202ENST00000562702 PRPSAP2O60256 369 aa2.07□□□□□ -2.08
HDGFL3-202ENST00000562702 ANP32DO95626 131 aa2.07□□□□□ -2.08
HDGFL3-202ENST00000562702 SLC4A1P02730 911 aa2.07□□□□□ -2.08
HDGFL3-202ENST00000562702 HEXBP07686 556 aa2.07□□□□□ -2.08
HDGFL3-202ENST00000562702 CD55P08174 381 aa2.07□□□□□ -2.08
HDGFL3-202ENST00000562702 STSP08842 583 aa2.07□□□□□ -2.08
HDGFL3-202ENST00000562702 RALAP11233 206 aa2.07□□□□□ -2.08
HDGFL3-202ENST00000562702 ARF4P18085 180 aaPredicted RBP2.07□□□□□ -2.08
HDGFL3-202ENST00000562702 AHCYP23526 432 aa2.07□□□□□ -2.08
HDGFL3-202ENST00000562702 PTPN6P29350 595 aa2.07□□□□□ -2.08
HDGFL3-202ENST00000562702 RPL4P36578 427 aaKnown RBP2.07□□□□□ -2.08
HDGFL3-202ENST00000562702 PLOD1Q02809 727 aaPredicted RBP2.07□□□□□ -2.08
HDGFL3-202ENST00000562702 CKAP4Q07065 602 aaKnown RBP2.07□□□□□ -2.08
HDGFL3-202ENST00000562702 KLHL30Q0D2K2 578 aa2.07□□□□□ -2.08
HDGFL3-202ENST00000562702 PSG7Q13046 419 aa2.07□□□□□ -2.08
HDGFL3-202ENST00000562702 ORC2Q13416 577 aaPredicted RBP2.07□□□□□ -2.08
HDGFL3-202ENST00000562702 SNX1Q13596 522 aa2.07□□□□□ -2.08
HDGFL3-202ENST00000562702 UBE2V2Q15819 145 aa2.07□□□□□ -2.08
HDGFL3-202ENST00000562702 CCDC40Q4G0X9 1142 aa2.07□□□□□ -2.08
HDGFL3-202ENST00000562702 TEX44Q53QW1 395 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms